mRNA_S-dermatodea_contig11446.936.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: A0A7S2CPG4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPG4_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.100e-25 Identity = 60/91 (65.93%), Postives = 74/91 (81.32%), Query Frame = 1
Query: 4 GNQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKIREELTRRSNRRSRGG 276
GN+ P+ADRIAVLAIAYHN+GVE EFLKKF+ SLQSYRKGVEV++++LG +HA+TVTLRNS +AARRAI RD + R + R+ RGG
Sbjct: 185 GNEAPKADRIAVLAIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSERFLGPDHAITVTLRNSCIAARRAIMVRDPQARLQNLESKGRKGRGG 275
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: A0A7S4A6K0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6K0_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.870e-24 Identity = 59/89 (66.29%), Postives = 75/89 (84.27%), Query Frame = 1
Query: 13 PPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKIR-EELTRRSNRRSRGG 276
PP+ADR+AVLAIAYHN+GVEQEFLKK SLQSYRKGVEVA++YLGG+HA+T TLRNS +AARR + ARD + R + + +++ RR+ GG
Sbjct: 194 PPKADRVAVLAIAYHNVGVEQEFLKKHNQSLQSYRKGVEVAERYLGGDHAITSTLRNSCVAARRTMLARDPQARLQGMGKKAARRAPGG 282
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: A0A7S2RTK0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTK0_9STRA) HSP 1 Score: 114 bits (284), Expect = 5.260e-24 Identity = 54/77 (70.13%), Postives = 67/77 (87.01%), Query Frame = 1
Query: 4 GNQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKIR 234
G + P+ADRIAVLAI+YHN+GVE EFLKKF+ SLQSYRKGVEVA+++LG HA+T+TLRNS +AA+RAI ARD +R
Sbjct: 193 GKEAPKADRIAVLAISYHNVGVEYEFLKKFDQSLQSYRKGVEVAERFLGSEHAITITLRNSCIAAKRAIMARDPHVR 269
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: A0A7S2E3J0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E3J0_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.340e-23 Identity = 66/139 (47.48%), Postives = 92/139 (66.19%), Query Frame = 1
Query: 4 GNQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKIREELTRRSNRRSRGGDRVGRTKPKSNVGTGVLSKALSTT-APRQETLHEEYAGDDGGEDDKAH 417
GN+PP+ADRIAVL+IAYHN+GVE EFLK+F+ LQ YRKGVEV++++LG +H++T+TLRNS +AARRAI A+D + ++ SN+ R GR+ K TG + + T +PR E GD ++K H
Sbjct: 105 GNEPPKADRIAVLSIAYHNVGVEYEFLKQFDLCLQQYRKGVEVSERFLGPDHSITITLRNSCIAARRAIVAKDPHAQMKML--SNKTK---SRTGRSTRKE-YATGTRGRPMETLLSPRPED------GDSQAAEEKEH 231
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: A0A7S3YLC4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLC4_HETAK) HSP 1 Score: 108 bits (269), Expect = 6.090e-22 Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 4 GNQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARD 222
G+ PR DR+AVL IAYHN+GVEQEFLKK+E S+ SYRKGVEV +++LG HA+TVTLRNS +AARRA+ ARD
Sbjct: 234 GDGDPRPDRVAVLGIAYHNIGVEQEFLKKYEQSIASYRKGVEVVERFLGPRHAITVTLRNSLVAARRAVGARD 306
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: A0A7S1XJL3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJL3_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.590e-20 Identity = 54/79 (68.35%), Postives = 68/79 (86.08%), Query Frame = 1
Query: 13 PPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSK---IREE 240
PP+ DRIAVLAIAYHN+GVEQEFLKKFE SL SYRKG++VA+++LGG+HA+ +TLRNS AARRA +++D K +REE
Sbjct: 304 PPK-DRIAVLAIAYHNIGVEQEFLKKFEMSLTSYRKGIQVAERFLGGDHAIALTLRNSLTAARRAFASKDPKGRKLREE 381
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: A0A7S3HH21_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH21_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.860e-19 Identity = 47/71 (66.20%), Postives = 60/71 (84.51%), Query Frame = 1
Query: 4 GNQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISA 216
G PP+ADRIAVLAIAYHN+GVEQEFLK++E S+ SY+KGVEVA++YLG HA+ VTL NS +AA++ +A
Sbjct: 179 GAAPPQADRIAVLAIAYHNIGVEQEFLKRYEQSVLSYKKGVEVAERYLGAKHAICVTLNNSLVAAKKQAAA 249
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: A0A482SDU3_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDU3_9ARCH) HSP 1 Score: 93.2 bits (230), Expect = 3.870e-17 Identity = 45/65 (69.23%), Postives = 53/65 (81.54%), Query Frame = 1
Query: 4 GNQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAA 198
G P+ADRIAVLAIAYHN+GVEQEFLK+FE S+ SY+KG EVA++YLG HA+T TL NS AA
Sbjct: 147 GAAAPQADRIAVLAIAYHNIGVEQEFLKRFEQSILSYKKGAEVAERYLGTKHAITRTLNNSLAAA 211
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: A0A024U4G6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4G6_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 4.960e-17 Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 19 RADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGGNHAVTVTLRNSTMAARRAISARDSKIREELT 246
+ DRIAVL IAYHN+GVEQEFLKK E S+ SYRKG EVA KYLG +H + +TLRNS + A RA+ AR S+ R T
Sbjct: 217 KLDRIAVLGIAYHNVGVEQEFLKKLELSIHSYRKGAEVAAKYLGESHGMVITLRNSLVTATRALEARASRGRLPTT 292
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Match: D8LLY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY8_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 6.550e-17 Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 1
Query: 1 GGNQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQK 141
GG+QPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV +
Sbjct: 187 GGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVTAR 233 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11446.936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11446.936.1 >prot_S-dermatodea_contig11446.936.1 ID=prot_S-dermatodea_contig11446.936.1|Name=mRNA_S-dermatodea_contig11446.936.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=203bp GGNQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQKYLGback to top mRNA from alignment at S-dermatodea_contig11446:2007..5192+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11446.936.1 ID=mRNA_S-dermatodea_contig11446.936.1|Name=mRNA_S-dermatodea_contig11446.936.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3186bp|location=Sequence derived from alignment at S-dermatodea_contig11446:2007..5192+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11446:2007..5192+ >mRNA_S-dermatodea_contig11446.936.1 ID=mRNA_S-dermatodea_contig11446.936.1|Name=mRNA_S-dermatodea_contig11446.936.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at S-dermatodea_contig11446:2007..5192+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |