mRNA_S-dermatodea_contig11407.909.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: A0A6H5J9L9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L9_9PHAE) HSP 1 Score: 128 bits (322), Expect = 1.080e-32 Identity = 82/98 (83.67%), Postives = 89/98 (90.82%), Query Frame = 1
Query: 1 MAGTDPSPKVSKRKGGLKARKXXXXXXXXXXX-LEGITLTEKGSAGT-ANDGPQARNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
MAG +PSPKVSKRKGG KARKXXXXXXXXXXX +EGITL EKG AG +DGPQARNASGIL SEARARD+KIQSFSLSFHSKILVEDS+IE+N+GRR
Sbjct: 1 MAGKEPSPKVSKRKGGAKARKXXXXXXXXXXXGVEGITLKEKGGAGVDGDDGPQARNASGILASEARARDIKIQSFSLSFHSKILVEDSTIEMNYGRR 98
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: A0A835ZA40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA40_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 7.830e-12 Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 97 LEGITLTEKGSAGTANDGPQARNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
++G+T+ ++ TA+ R A+G+LVSE RARD+KIQ FSLS SK LVED+ +ELN+G+R
Sbjct: 34 VDGLTVEDRTDGATADHSESGRMATGVLVSEKRARDIKIQGFSLSLFSKPLVEDTILELNYGQR 97
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: A0A8H7ZNL0_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H7ZNL0_9FUNG) HSP 1 Score: 63.5 bits (153), Expect = 1.100e-9 Identity = 29/54 (53.70%), Postives = 43/54 (79.63%), Query Frame = 1
Query: 133 GTAN--DGPQARNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
G AN DG R+ G+L S+ ++RD+KI+SF+LSFH ++L++D++IELNFGRR
Sbjct: 92 GDANSKDGVADRSCVGVLTSDPKSRDIKIESFTLSFHGRLLIQDATIELNFGRR 145
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: A0A397U9W9_9GLOM (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397U9W9_9GLOM) HSP 1 Score: 63.5 bits (153), Expect = 1.150e-9 Identity = 26/43 (60.47%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 160 RNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
R A+G+L S++RA+DVKI+ +SLSFH ++L+E+++IELNFGRR
Sbjct: 61 RTANGVLTSQSRAKDVKIEQYSLSFHGRVLIENATIELNFGRR 103
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: A0A8H4A6H7_GIGMA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4A6H7_GIGMA) HSP 1 Score: 63.2 bits (152), Expect = 1.520e-9 Identity = 26/43 (60.47%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 160 RNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
R A+G+L S+ RA+DVKI+ +SLSFH ++L+E+++IELNFGRR
Sbjct: 61 RTANGVLTSQTRAKDVKIEQYSLSFHGRVLIENATIELNFGRR 103
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: B6JW30_SCHJY (Ribosome biogenesis ATPase (Fragment) n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6JW30_SCHJY) HSP 1 Score: 62.8 bits (151), Expect = 2.140e-9 Identity = 29/57 (50.88%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 121 KGSAGTANDGPQ-ARNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
K A + D P R+ASG+LVS+A +RD+KI+S++LSFH ++L+E+++IELN G+R
Sbjct: 49 KSMANVSTDDPMFERSASGVLVSQAMSRDIKIESYTLSFHGRLLIENATIELNHGQR 105
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: A0A1X2G823_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G823_9FUNG) HSP 1 Score: 61.6 bits (148), Expect = 5.410e-9 Identity = 25/43 (58.14%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 160 RNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
R A+G+ VS+ R+RD+KI S+SL++H ++L+E++SIELNFGRR
Sbjct: 10 RTATGVYVSQERSRDIKIDSYSLNYHGRVLIENASIELNFGRR 52
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: R4XCR2_TAPDE (Ribosome biogenesis ATPase,Arb family ABCF2-like n=2 Tax=Taphrinales TaxID=5008 RepID=R4XCR2_TAPDE) HSP 1 Score: 61.6 bits (148), Expect = 5.460e-9 Identity = 29/61 (47.54%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 106 ITLTEKGSAGTANDGPQARNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
+T + +A A+ R A+G+L S A +RDVKI+SF+LSFH ++L+ED+ IELN+G+R
Sbjct: 43 VTSPDALAAALADSNTFERTATGVLTSAAMSRDVKIESFTLSFHGRLLIEDAVIELNWGQR 103
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: A0A8H7SNK2_9FUNG (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SNK2_9FUNG) HSP 1 Score: 61.2 bits (147), Expect = 7.700e-9 Identity = 25/43 (58.14%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 160 RNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
R A+G+ S+ R+RD+KI SFSL+FH ++L++++SIELNFGRR
Sbjct: 53 RTATGVYTSQERSRDIKIDSFSLNFHGRVLIDNASIELNFGRR 95
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Match: A0A0B7NPT3_9FUNG (Uncharacterized protein n=7 Tax=Mucorineae TaxID=1344963 RepID=A0A0B7NPT3_9FUNG) HSP 1 Score: 60.5 bits (145), Expect = 1.390e-8 Identity = 25/43 (58.14%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 160 RNASGILVSEARARDVKIQSFSLSFHSKILVEDSSIELNFGRR 288
R A+G+ S+ R+RD+KI SFSL+FH ++L++++SIELNFGRR
Sbjct: 54 RTATGVYSSQERSRDIKIDSFSLNFHGRVLIDNASIELNFGRR 96 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11407.909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11407.909.1 >prot_S-dermatodea_contig11407.909.1 ID=prot_S-dermatodea_contig11407.909.1|Name=mRNA_S-dermatodea_contig11407.909.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=96bp MAGTDPSPKVSKRKGGLKARKAAKAAEAAAAGLEGITLTEKGSAGTANDGback to top mRNA from alignment at S-dermatodea_contig11407:3748..4035- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11407.909.1 ID=mRNA_S-dermatodea_contig11407.909.1|Name=mRNA_S-dermatodea_contig11407.909.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=288bp|location=Sequence derived from alignment at S-dermatodea_contig11407:3748..4035- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11407:3748..4035- >mRNA_S-dermatodea_contig11407.909.1 ID=mRNA_S-dermatodea_contig11407.909.1|Name=mRNA_S-dermatodea_contig11407.909.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=576bp|location=Sequence derived from alignment at S-dermatodea_contig11407:3748..4035- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |