mRNA_S-dermatodea_contig1128.816.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1128.816.1
Unique NamemRNA_S-dermatodea_contig1128.816.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: D7FQI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI6_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 2.280e-62
Identity = 119/189 (62.96%), Postives = 137/189 (72.49%), Query Frame = 3 
Query:  588 SLADELASAAAVTGTSNEGHTRGTSESSIAQKEELPVTRVPSTAASPEPSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYS--THNDKGEVAGKP-QEAAA 1145
            S+  E+ S +   GT N     GT       +EE P        A+  P   +M  K D+L   H+ERVLVVGKGVVLTANVTSCDKV+VEG+FQGNIKTGTF+L+EGG MEGEVRC+DGCIGGNM+ATIIASKTLLIGKAAVV GDMVYDSLQ++DGGRLQGKLTHYS  T  + G+   KP QEA A
Sbjct:   32 SVTPEIQSGSERAGTPNR---LGTLPEPAELEEEEPAAEAEPVIAASTPQEEKMPDKEDVLAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIKTGTFVLSEGGQMEGEVRCSDGCIGGNMKATIIASKTLLIGKAAVVTGDMVYDSLQVLDGGRLQGKLTHYSSTTAGENGKEGSKPVQEAGA 217
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A6H5JYZ3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYZ3_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.130e-55
Identity = 110/188 (58.51%), Postives = 140/188 (74.47%), Query Frame = 3 
Query:  588 SLADELASAAAVTGTSNE-GHTRGTSESSIAQKEELPVTRVPSTAASPEPSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYS--THNDKGEVAGKPQEAA 1142
            S+  E+ S +   GT N  G   G +E  + ++E    T+    A++PE  +P    +  +L   H+ERVLVVGKGVVLTANVTSCDKV+VEG+FQGNI+TGTF+L+EGG MEGEVRC++GCIGGNM+ATIIAS+TLLIGKAAVV GDMVYDSLQ+++GGR+QGKLTHYS  T  + G+   KP + A
Sbjct:  159 SVTPEIQSGSERAGTPNRLGTLPGPAE--LEEEEPAAETKPVIAASTPEEKMP---AEEGVLAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIETGTFVLSEGGQMEGEVRCSEGCIGGNMKATIIASETLLIGKAAVVTGDMVYDSLQVLEGGRIQGKLTHYSSSTAGENGKEGSKPVQEA 341
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: D7FXK1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXK1_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.960e-11
Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 3 
Query:  759 PDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRAT-IIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYSTHNDKGEVAGKPQE 1136
            P  + PA  +RVLVVGK VV+TA+V +CD VIV+G+  GNI     ++ +GG M G V C +  + G+     +     L +   A V G   Y  L + DG  L G+L +  +  D+  V   P +
Sbjct:   68 PPSIVPAGTKRVLVVGKSVVMTADVENCDAVIVQGNLDGNIVAKYVVIMKGGCMRGTVVCEEADVAGSFEGVEMTIHHRLTLSGTARVGGKTTYHRLSVHDGAILTGELQYKPSLRDETAVPAPPAD 194
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A239HT97_9SPHN (Protein CcmA, bactofilin family n=2 Tax=Sphingopyxis TaxID=165697 RepID=A0A239HT97_9SPHN)

HSP 1 Score: 62.0 bits (149), Expect = 3.760e-8
Identity = 32/97 (32.99%), Postives = 58/97 (59.79%), Query Frame = 3 
Query:  798 VVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTH 1088
            ++G  VV+T NV +   + V+G  +G++K    +  E   ++G V      + G +  +I A KTL++  +A + GD+VY+++ I +GG++ GKLTH
Sbjct:   12 IIGSDVVITGNVAASVDLHVDGKIEGDLKCANLVQGEASEIKGAVAADTAKLAGLLDGSIEA-KTLIVHASARITGDVVYETITIENGGKVDGKLTH 107
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A0W1DNC4_9SPHN (Cell shape determination protein CcmA n=3 Tax=unclassified Sphingopyxis TaxID=2614943 RepID=A0A0W1DNC4_9SPHN)

HSP 1 Score: 62.4 bits (150), Expect = 4.080e-8
Identity = 36/119 (30.25%), Postives = 66/119 (55.46%), Query Frame = 3 
Query:  732 PSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTH 1088
            PS+P +  K  +   A      V+G  VV+T NV +   + ++G  +G++K    +  E   ++G V      I G +  +I A KTL++   A + GD++Y+++ I +GG+++GKL+H
Sbjct:   15 PSLPTVPAK--MASGARHTTFSVLGSDVVITGNVAASVDLHIDGKIEGDLKCANLVQGEASEIKGAVTADTAKIAGLLDGSIEA-KTLIVHATARITGDVIYETITIENGGKVEGKLSH 130
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A537SG45_9PROT (Polymer-forming cytoskeletal protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SG45_9PROT)

HSP 1 Score: 62.8 bits (151), Expect = 5.660e-8
Identity = 46/160 (28.75%), Postives = 77/160 (48.12%), Query Frame = 3 
Query:  672 IAQKEEL----PV--TRVPSTAASPEPSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKT-GTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYSTHNDKGEVAGKP 1130
            +A+K++L    PV  T  P  + +P    PE   + +  + A D R L++G GV +   +TSC+++IVEG  +  +      I+ +GG   GE    D  I G     ++    LL+     V G + Y  ++I  GG++ G++   S H D+     KP
Sbjct:   28 VAEKKQLKPTEPVWKTTEPLRSVAPPSPAPEAEPQANSRETAADVRTLIIGPGVSVKGEITSCNRLIVEGKIEAKLADCPNVIIKQGGVFNGESTTQDADIQGCFAGNLVVRGRLLVRATGTVGGKIAYGEIEIERGGQISGEI---SDHTDEAVSHLKP 184
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A317E6K6_9PROT (Cell shape determination protein CcmA n=1 Tax=Zavarzinia compransoris TaxID=1264899 RepID=A0A317E6K6_9PROT)

HSP 1 Score: 62.0 bits (149), Expect = 1.050e-7
Identity = 42/130 (32.31%), Postives = 62/130 (47.69%), Query Frame = 3 
Query:  759 PDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFI-LAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYSTHNDKGEVAGKPQEAAA 1145
            P    P+ D++ L+VG+ +VL+  +T+CDK++VEG     +     I +   G  +G     +  IGG    T+I    LLI     V G++ Y  L+I  GG L G +      N     A KP EA A
Sbjct:   33 PSAPPPSSDDKKLIVGRNIVLSGQITACDKLVVEGRVDATLTESRVIEITSTGVFKGAAEIDEALIGGVFEGTLICRGRLLIRSTGKVKGEIRYGQLEIECGGELVGDI------NTVQGQATKPAEAPA 156
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A0M4D5U6_SPHS1 (Cell shape determination protein CcmA n=3 Tax=Sphingopyxis TaxID=165697 RepID=A0A0M4D5U6_SPHS1)

HSP 1 Score: 60.5 bits (145), Expect = 2.380e-7
Identity = 32/97 (32.99%), Postives = 58/97 (59.79%), Query Frame = 3 
Query:  798 VVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTH 1088
            ++G  VV+T NV +   + V+G  +G++K    +  E   ++G +      I G +  +I A KTL+I  +A + GD+VY+++ I +GG++ GKL+H
Sbjct:   40 IIGSDVVITGNVAASVDLHVDGKIEGDLKCANLVQGEASEIKGAIIAETAKIAGLLDGSIEA-KTLVIHASARITGDVVYETITIENGGKVDGKLSH 135
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A317E7N0_9PROT (Cell shape determination protein CcmA n=1 Tax=Zavarzinia aquatilis TaxID=2211142 RepID=A0A317E7N0_9PROT)

HSP 1 Score: 60.5 bits (145), Expect = 3.150e-7
Identity = 36/117 (30.77%), Postives = 56/117 (47.86%), Query Frame = 3 
Query:  735 SIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFI-LAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKL 1082
            S P     P    P+ D++ L+VG+ +VL+  +T+CDK++VEG     +     I +   G  +G     +  IGG     +I    LLI     V G++ Y  L+I  GG L G +
Sbjct:   24 SRPLTPATPSAPPPSSDDKKLIVGRNIVLSGQITACDKLVVEGRVDATLTESRVIEITSTGVFKGAAEIDEALIGGTFEGKLICRGRLLIRATGKVKGEIRYGQLEIECGGELVGDI 140
[Close]
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: D7FXL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL1_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 6.850e-7
Identity = 32/120 (26.67%), Postives = 62/120 (51.67%), Query Frame = 3 
Query:  732 PSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHY 1091
            P++P       LL+  +    + +G+GV+LTA+VT  + V++ G F+G +      + +G  + G + C    + G      ++S +L +   A V+G ++Y  L++  G +L G L+ Y
Sbjct:   14 PTLPTKRTVRQLLETRNTLNKMEIGQGVLLTADVTGAELVVIRGCFEGKVTAQCIDIEQGAEVRGTIECEAARVNGKFDGVFMSSHSLHLASHANVSGRIIYRRLKVAKGAQLYG-LSEY 132
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FQI6_ECTSI2.280e-6262.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYZ3_9PHAE1.130e-5558.51Reverse transcriptase domain-containing protein n=... [more]
D7FXK1_ECTSI1.960e-1135.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A239HT97_9SPHN3.760e-832.99Protein CcmA, bactofilin family n=2 Tax=Sphingopyx... [more]
A0A0W1DNC4_9SPHN4.080e-830.25Cell shape determination protein CcmA n=3 Tax=uncl... [more]
A0A537SG45_9PROT5.660e-828.75Polymer-forming cytoskeletal protein n=1 Tax=Alpha... [more]
A0A317E6K6_9PROT1.050e-732.31Cell shape determination protein CcmA n=1 Tax=Zava... [more]
A0A0M4D5U6_SPHS12.380e-732.99Cell shape determination protein CcmA n=3 Tax=Sphi... [more]
A0A317E7N0_9PROT3.150e-730.77Cell shape determination protein CcmA n=1 Tax=Zava... [more]
D7FXL1_ECTSI6.850e-726.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1128contigS-dermatodea_contig1128:15911..21133 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score65.9
Seed ortholog evalue2.7e-08
Seed eggNOG ortholog269796.Rru_A0151
EggNOG free text desc.Polymer-forming cytoskeletal
EggNOG OGs1N26P@1224,2JZ8N@204441,2UD9Q@28211,COG1664@1,COG1664@2
COG Functional cat.M
Best tax levelRhodospirillales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF583
Ec32 orthologEc-01_008800.1
Exons3
Model size1160
Cds size636
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1128.816.1prot_S-dermatodea_contig1128.816.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1128 16435..21133 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924194.4954472-UTR-S-dermatodea_contig1128:15910..164341622924194.4954472-UTR-S-dermatodea_contig1128:15910..16434Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1128 15911..16434 +
1694079083.402811-UTR-S-dermatodea_contig1128:15910..164341694079083.402811-UTR-S-dermatodea_contig1128:15910..16434Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1128 15911..16434 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924194.510187-CDS-S-dermatodea_contig1128:16434..164991622924194.510187-CDS-S-dermatodea_contig1128:16434..16499Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1128 16435..16499 +
1694079083.4127548-CDS-S-dermatodea_contig1128:16434..164991694079083.4127548-CDS-S-dermatodea_contig1128:16434..16499Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1128 16435..16499 +
1622924194.520064-CDS-S-dermatodea_contig1128:17016..173361622924194.520064-CDS-S-dermatodea_contig1128:17016..17336Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1128 17017..17336 +
1694079083.4206111-CDS-S-dermatodea_contig1128:17016..173361694079083.4206111-CDS-S-dermatodea_contig1128:17016..17336Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1128 17017..17336 +
1622924194.5310285-CDS-S-dermatodea_contig1128:20882..211331622924194.5310285-CDS-S-dermatodea_contig1128:20882..21133Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1128 20883..21133 +
1694079083.429024-CDS-S-dermatodea_contig1128:20882..211331694079083.429024-CDS-S-dermatodea_contig1128:20882..21133Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1128 20883..21133 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1128.816.1

>prot_S-dermatodea_contig1128.816.1 ID=prot_S-dermatodea_contig1128.816.1|Name=mRNA_S-dermatodea_contig1128.816.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=212bp
MSATMEKLHKKRRSFSRRPSFSLADELASAAAVTGTSNEGHTRGTSESSI
AQKEELPVTRVPSTAASPEPSIPEMAVKPDLLKPAHDERVLVVGKGVVLT
ANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRAT
IIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYSTHNDKGEVAG
KPQEAAAEAAA*
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mRNA from alignment at S-dermatodea_contig1128:15911..21133+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1128.816.1 ID=mRNA_S-dermatodea_contig1128.816.1|Name=mRNA_S-dermatodea_contig1128.816.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5223bp|location=Sequence derived from alignment at S-dermatodea_contig1128:15911..21133+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGCCCGCGCTCCGCCTACGTCGCTCTCGCTCCAAGAGGCCTGCCTCCACC
CTGTACTATCTTGGCACCACAGCTTGAAGGTGAGCGGGGAACCGACTGGT
GCGATACAAGCAATACGGGGTATAGAGAGATCTGTGATGACGTTGTGTTA
CTACTATAATATTATTATACTGCTGTTCATGTATGTGTGATATGACAATA
AATAATGAGATAGACAGATATGACGTGATGTTTATATACAGTATACAATA
AAAAATATATATACAATTCATATGTAGATCCGAATAAGCTGGCCTTTCGA
TATATATATATAGATCGGTATTCATTTTATACGTAATACCTTGTGTAACG
TCCAGTTTTATAGATTGCGGTGGAAATCTGACCCATTTAGTTTACTAGTT
TATGGGCACTGCTGAGGCTTTGGGGCGCCCATTGTAGAACCGCCCCATAA
TTTCCAGGCACCTCACGCTCTCGGCACGCACTCCCTCGCTGATTTGACCT
CGAGCCTGGGGCTGGCCGCACCCGATGAGCGCCACCATGGAAAAGTTGCA
CAAGAAGCGCAGATCGTTCTCCAGAAGGCCATCTTTCAGGTAGAACAAAC
TGCTCGAGGGGCGGTGAAGTTTAAGTTTGTGTTTGTTTAGTGTCATCATC
ATCAAGAACCAGCCAGGACTGCGTGTGCGGGCGACAAAACAAACAAACAA
AAAACCCCGAACGATTTTTGCCTACTTTTCTTTTTCTTTGTACAATACTT
TGTAGTGATATATATATTTTTATTATTTTTTCACTTGCCACATTTTCGAT
GGGTCCCAGTATTTTTGTGGTAAAGAAAAACACGTCAGCCCTATAGAAAT
AAGACAAGAAGACATCAAACAGCCATAAAACAAGCTGGGGCCCAGGAGTA
GGTCACCCGCGCGGCGTTGAGCGCGTGAGCCCAAACATCGACACATAGAT
CCCGCCTGGCCACAGGCCCTGCTGCGCCTCGAGCTACCCCAGCATCTATC
TCGCTCTCCTCTCTCTCGACGACGTACGCGACGCCTCACACTAGAAGATT
GTTCCTGCGTCCCGCCTGGCTCTTCTTTGTTGTCTGCTCGTCGCAATTTA
CCGTAGTCTCGCGGACGAGCTGGCTAGCGCAGCAGCTGTAACAGGAACAT
CAAACGAAGGGCACACTCGAGGGACATCGGAATCTTCTATAGCGCAGAAA
GAGGAGCTGCCTGTTACGCGGGTGCCCAGCACAGCGGCGTCCCCCGAACC
CTCGATCCCCGAGATGGCTGTCAAGCCGGACCTGTTGAAACCGGCCCACG
ATGAGCGAGTGCTGGTGGTCGGGAAGGGGGTCGTCCTGACGGCGAACGTG
ACTTCGTGCGACAAAGTCATCGTGGAGGGGCACTTCCAAGGAAACATCAA
GACTGGCACTTTCATCTTGGCTGAGGGTGAGAGAGATATCTATGACACAG
AGAGAGGGTGGCGGTATCATAGCTTGCCAACGTATCGTATACACAGCTGT
AGTAGTATACCTATTCGTCTTCTTCCTCTGTGTTCTCCACACCCACGCAC
CACATTGCAACAACTCGTCGGCTGTTTGTGATGATTATGGCGATGACGAT
CCGATGCTATCATACTTTTGCTGCTACAGCAGTGTATATTATATACATGC
TCTCCCTTTTTTTGCTTTCATCAGCAAAAATAATATGAAATACCTTGCAC
AGAGTACTTGTAAATTCAGAGCTTGGTCCAGAAATCAATAGAGAAGGCCT
TCTTTTTCTTGCTTTCTTGCGTTTGTGCCCTTCAAGCCGGAATGGTGAAG
CAAGCAAGCGTTGAATCGAAAGGTTCTGGCTACAGCGTCCATTGTACGTA
TTCTCCGATTAGAGTGGTGGTCCGTCTACGGTTCTGCGGGGTGGTGGATT
TGTTGTGTTTTGTGTTTCCCCAGCAGCTCGGCGGGGAAAGAAAGCGTTTG
TGTTGTGTGTGTGTGTGCGATGCGCCTGTTTGTGAGGCATTTTTCTCGTG
TTATGATATTTATAGTAGTTGCACGCTACAACGTTCCTTTGAGAGTATCA
TATAAACGTAATAATAAAAGGAAATCGCGGCTGGTTTTTTGCAGCAATGC
GCCGGCTTCGGGTGGCACCTTCAGTATGTATGTACAGTATGTACAGCAGC
ATGTATGTGCGTATGTAAGCGAACGGCAAGGAGAGCTTTCATAACTCACG
AGTCCTCAGCGTTCGGCGTTTTTCCGTTCCGACTTTGGACAGAGTATAAT
TATGTAGTACCTAGGTAGCCCGGTCCCAGCTGTGTGGTGCCATACAAAAA
CAATCTATGCATACCAGGTACTACAATTACTCATTCTATTATCGTAGAGC
TTGGTACTCGTACCTGCAATGTTTTATTATGGTTTCAGTTTTGTTTGTGC
TTCATATTATGTACCAGGTAAGCTGTCGTGGTGGTATGATGTGTACGACG
AACCATCGACTCGATGCATGACGGGGTTCAGCCGGCTGAATGAAGCTTTG
AAACGCATCGCGGCTCCAGCATTCGTGTCTGTATCGTGAAGGACGAAAGG
ACTAGAGCAATAATTGTTGTTCCGGGAAACTTGAGATACAGTATGTAGAT
AAAAAAAATCCGGCAGATAGATGGATGCGCGGGGAACTGATTGAAAGAAA
GTATTAGTTGTGGTAGAGTTGGCTCAGTACAGCGGTTGCTCGCGGGCCAA
CCCTGTTCGTTCTTTCGCCCCCAGGAGGTCTTGGAGGTCTTTTGGGCGCG
TGTGTCCCGCCAGCAGCTGCCATCATAGCTCCCTGTTGTTGCTGTTTTTT
TTATTTGTTTTTTTTTGTTTGATTTGCACACGTAGAATTGTTTGGAAAAA
ACAGCAAACAACTACGTGCATGTATACTGCTGAATATCTGTCAACATAGC
TCGATGGCCAACGTCAACGTTTATTTCCATTTTGGAGCCGGTGAGCACGC
GAGCTCTTATAAAACAGTTTAGAGACGCGTCTCCCCTCTCCTCTTTCCGG
ACCGGTCGCTTGGCCCTCCTGCACCCTCTGCTATTAATACTTATATTATA
CTACTAGTAATATTGATACTGCCTGTGCGTCGTTGGAAAGAATGTGGAAC
ATTTTTTTCAATTGTGTTTTGTTTTCCCATCTATCTCCTCCTGCCTGCTC
CATGGTCGATCGGGTTGTTGTGTTCGCCTTCACTTTCACTTTTGGGGTAC
GCCACACGACGAGTTGGTTGATCGCTATTATAGTGCTTGTATCATATGAA
GATGAATGAGTCCGCACCGGCCCGGAGTGCCCTCCAACTGGCACTCTTCT
GCCGTGGAGCCTGTGTACAAGCTTGTTTGCGGTCGGGCAAACCCCGACGC
CCGCAAGCCCCTTCTTCCAGAGAACACGTAGCTATGATAGAAACGTACGT
ATACCCACATAAATATATTGAGAGAGAGCTACTGTATGCAGCAGTATGTT
AAACCTGGTATAATACATATATACTTCTGCCAGATGCGGAAGAGACCGCC
TGTTATACTATTTATTGTACTGTGTAGCAAGCAGGAGACTTTCAACAACT
ACTGAATGACAACTATTGGCACCGGGCGGGCTGGTGTGGGAACGATTCCG
CCCCGACGCGAGCGCGTGCTCGCGATCGTTGCAAACCGAGCTATAACAGG
CCTTGATTCCGGACGAGAAACTTATATCACATCGATCCCAAGAGGAGCAC
TCCCGTACCCACGTGGTGACCGGTAAAATTGGAGACCAGGATACATATGT
CGCTCGGCGGCCACAGCAGCGAGCTGGTCCAGGAAACGGCGTGGTCGTTG
CTAACATGGTCGCGTGACGAGGCTCGTTCTCGATTCTCGATCGAAAAACG
AACGGGCACAAAACGAAGGTTGTCCGAGTGTCTATGGTATGGTATAATAT
CATGCATGATCCATGGCGAGACATTCGGCCAGCGGATAATTCTAGGTCTC
ACACGACCGAACAACGATGACCGGTTCGTGAGGTGGAGAAAAACATGAAC
TATTATAAACTCTCTTCTTGTTGCATGGCCCGACCGAGCCTTCAACGCTA
AATCGCGATATGAAAGATTATTGATTGATCTGTTGTTCGGAATCGGTATC
GCGAGGTATAGGCACTACATATAATGCTTCCGTATCAAGGCATAATATGT
TGTGGTACTTACTTGTATATATACTGTAGAAGGAGGCCATGCGCGACTCC
GAGGCATTTGAAAGGCCCTGAAACAGAACCAATCCCCCTTGCCAGGACGT
GCTGAGTTGCGCTGCTGGATGGCATATACTTCGAATTTTCCTATACGTTT
TCACATCATGTAGGATAGGCTTGGAGTACAGCTCGTCTGCCTTGCTCTAC
ACATCGGGGTGCGACGAATGTGAGCGGACTCCGGGTTCCCTCGAGCCACA
GAGCCACAGCAGAAAGGTCTCAACTCTGCTCCCGATACGCGCACGGCTGC
TGTGCCGACTTTTTTTTTCTCCTCATTGACATGGAAGCGTTCCCAGGTGT
ACTGTACTATACTGTAATACTATTTAATACTTGACACTGCTATACCCCAT
CCTTGTTGTTCCGCTCGCTCGTTTCATCTCTTTTTTCACCGGACAACATG
CTCGGTTTTTGCGAAACGTTCCTCTACCTAGTATCATCGCTCCCGCCCTC
TCTATACATCACAGCACATCGTACGCTCTGTTTTGTACCTGGTACATACC
TCTTTCGAACAAAATTGCCCCGCATCATCATATACCCCCCCCCCCCCTGA
TAGCAGCTGGTGTGGTATCATCCTTCCTTGTGAAGTGCAGCCTGGCCAGC
GAACCGTCAACCCGGCATATATATCGCTCCGTCCCGGTATTGTTGGGACG
CGTGGTGTATGCTATGTCCGTCTGGATAAGACATACCTGGTACCGGTACG
TGTTAACGTAAGTACCACCCCCCCCCCCTCTCGCGCGTGCCTGCGCGCGT
TGCGTTTTTTTGGGCGAGCCAGGAGGCAACATGGAGGGAGAAGTGCGCTG
CGCGGATGGCTGCATTGGCGGAAACATGAGGGCCACGATCATAGCCTCCA
AAACGCTCTTGATCGGGAAAGCGGCTGTCGTTGCCGGCGACATGGTGTAC
GATTCTCTTCAGATAATCGACGGAGGTCGGCTCCAGGGCAAGCTTACGCA
CTACTCTACCCACAACGATAAGGGGGAGGTCGCGGGGAAACCGCAGGAAG
CAGCGGCGGAAGCAGCGGCGTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1128:15911..21133+

>mRNA_S-dermatodea_contig1128.816.1 ID=mRNA_S-dermatodea_contig1128.816.1|Name=mRNA_S-dermatodea_contig1128.816.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at S-dermatodea_contig1128:15911..21133+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGCGCCACCATGGAAAAGTTGCACAAGAAGCGCAGATCGTTCTCCAG
AAGGCCATCTTTCAGATGAGCGCCACCATGGAAAAGTTGCACAAGAAGCG
CAGATCGTTCTCCAGAAGGCCATCTTTCAGTCTCGCGGACGAGCTGGCTA
GCGCAGCAGCTGTAACAGGAACATCAAACGAAGGGCACACTCGAGGGACA
TCGGAATCTTCTATAGCGCAGAAAGAGGAGCTGCCTGTTACGCGGGTGCC
CAGCACAGCGGCGTCCCCCGAACCCTCGATCCCCGAGATGGCTGTCAAGC
CGGACCTGTTGAAACCGGCCCACGATGAGCGAGTGCTGGTGGTCGGGAAG
GGGGTCGTCCTGACGGCGAACGTGACTTCGTGCGACAAAGTCATCGTGGA
GGGGCACTTCCAAGGAAACATCAAGACTGGCACTTTCATCTTGGCTGAGG
TCTCGCGGACGAGCTGGCTAGCGCAGCAGCTGTAACAGGAACATCAAACG
AAGGGCACACTCGAGGGACATCGGAATCTTCTATAGCGCAGAAAGAGGAG
CTGCCTGTTACGCGGGTGCCCAGCACAGCGGCGTCCCCCGAACCCTCGAT
CCCCGAGATGGCTGTCAAGCCGGACCTGTTGAAACCGGCCCACGATGAGC
GAGTGCTGGTGGTCGGGAAGGGGGTCGTCCTGACGGCGAACGTGACTTCG
TGCGACAAAGTCATCGTGGAGGGGCACTTCCAAGGAAACATCAAGACTGG
CACTTTCATCTTGGCTGAGGGAGGCAACATGGAGGGAGAAGTGCGCTGCG
CGGATGGCTGCATTGGCGGAAACATGAGGGCCACGATCATAGCCTCCAAA
ACGCTCTTGATCGGGAAAGCGGCTGTCGTTGCCGGCGACATGGTGTACGA
TTCTCTTCAGATAATCGACGGAGGTCGGCTCCAGGGCAAGCTTACGCACT
ACTCTACCCACAACGATAAGGGGGAGGTCGCGGGGAAACCGCAGGAAGCA
GCGGCGGAAGCAGCGGCGTAGGAGGCAACATGGAGGGAGAAGTGCGCTGC
GCGGATGGCTGCATTGGCGGAAACATGAGGGCCACGATCATAGCCTCCAA
AACGCTCTTGATCGGGAAAGCGGCTGTCGTTGCCGGCGACATGGTGTACG
ATTCTCTTCAGATAATCGACGGAGGTCGGCTCCAGGGCAAGCTTACGCAC
TACTCTACCCACAACGATAAGGGGGAGGTCGCGGGGAAACCGCAGGAAGC
AGCGGCGGAAGCAGCGGCGTAG
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