prot_S-dermatodea_contig1128.816.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1128.816.1
Unique Nameprot_S-dermatodea_contig1128.816.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length212
Homology
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: D7FQI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI6_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 7.520e-65
Identity = 119/189 (62.96%), Postives = 137/189 (72.49%), Query Frame = 0
Query:   22 SLADELASAAAVTGTSNEGHTRGTSESSIAQKEELPVTRVPSTAASPEPSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYS--THNDKGEVAGKP-QEAAA 207
            S+  E+ S +   GT N     GT       +EE P        A+  P   +M  K D+L   H+ERVLVVGKGVVLTANVTSCDKV+VEG+FQGNIKTGTF+L+EGG MEGEVRC+DGCIGGNM+ATIIASKTLLIGKAAVV GDMVYDSLQ++DGGRLQGKLTHYS  T  + G+   KP QEA A
Sbjct:   32 SVTPEIQSGSERAGTPNR---LGTLPEPAELEEEEPAAEAEPVIAASTPQEEKMPDKEDVLAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIKTGTFVLSEGGQMEGEVRCSDGCIGGNMKATIIASKTLLIGKAAVVTGDMVYDSLQVLDGGRLQGKLTHYSSTTAGENGKEGSKPVQEAGA 217          
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A6H5JYZ3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYZ3_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 4.270e-58
Identity = 110/188 (58.51%), Postives = 140/188 (74.47%), Query Frame = 0
Query:   22 SLADELASAAAVTGTSNE-GHTRGTSESSIAQKEELPVTRVPSTAASPEPSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYS--THNDKGEVAGKPQEAA 206
            S+  E+ S +   GT N  G   G +E  + ++E    T+    A++PE  +P    +  +L   H+ERVLVVGKGVVLTANVTSCDKV+VEG+FQGNI+TGTF+L+EGG MEGEVRC++GCIGGNM+ATIIAS+TLLIGKAAVV GDMVYDSLQ+++GGR+QGKLTHYS  T  + G+   KP + A
Sbjct:  159 SVTPEIQSGSERAGTPNRLGTLPGPAE--LEEEEPAAETKPVIAASTPEEKMP---AEEGVLAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIETGTFVLSEGGQMEGEVRCSEGCIGGNMKATIIASETLLIGKAAVVTGDMVYDSLQVLEGGRIQGKLTHYSSSTAGENGKEGSKPVQEA 341          
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: D7FXK1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXK1_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.940e-12
Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 0
Query:   79 PDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRAT-IIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYSTHNDKGEVAGKPQE 204
            P  + PA  +RVLVVGK VV+TA+V +CD VIV+G+  GNI     ++ +GG M G V C +  + G+     +     L +   A V G   Y  L + DG  L G+L +  +  D+  V   P +
Sbjct:   68 PPSIVPAGTKRVLVVGKSVVMTADVENCDAVIVQGNLDGNIVAKYVVIMKGGCMRGTVVCEEADVAGSFEGVEMTIHHRLTLSGTARVGGKTTYHRLSVHDGAILTGELQYKPSLRDETAVPAPPAD 194          
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A239HT97_9SPHN (Protein CcmA, bactofilin family n=2 Tax=Sphingopyxis TaxID=165697 RepID=A0A239HT97_9SPHN)

HSP 1 Score: 62.0 bits (149), Expect = 7.640e-9
Identity = 32/97 (32.99%), Postives = 58/97 (59.79%), Query Frame = 0
Query:   92 VVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTH 188
            ++G  VV+T NV +   + V+G  +G++K    +  E   ++G V      + G +  +I A KTL++  +A + GD+VY+++ I +GG++ GKLTH
Sbjct:   12 IIGSDVVITGNVAASVDLHVDGKIEGDLKCANLVQGEASEIKGAVAADTAKLAGLLDGSIEA-KTLIVHASARITGDVVYETITIENGGKVDGKLTH 107          
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A0W1DNC4_9SPHN (Cell shape determination protein CcmA n=3 Tax=unclassified Sphingopyxis TaxID=2614943 RepID=A0A0W1DNC4_9SPHN)

HSP 1 Score: 62.4 bits (150), Expect = 7.970e-9
Identity = 36/119 (30.25%), Postives = 66/119 (55.46%), Query Frame = 0
Query:   70 PSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTH 188
            PS+P +  K  +   A      V+G  VV+T NV +   + ++G  +G++K    +  E   ++G V      I G +  +I A KTL++   A + GD++Y+++ I +GG+++GKL+H
Sbjct:   15 PSLPTVPAK--MASGARHTTFSVLGSDVVITGNVAASVDLHIDGKIEGDLKCANLVQGEASEIKGAVTADTAKIAGLLDGSIEA-KTLIVHATARITGDVIYETITIENGGKVEGKLSH 130          
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A537SG45_9PROT (Polymer-forming cytoskeletal protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SG45_9PROT)

HSP 1 Score: 62.8 bits (151), Expect = 1.050e-8
Identity = 46/160 (28.75%), Postives = 77/160 (48.12%), Query Frame = 0
Query:   50 IAQKEEL----PV--TRVPSTAASPEPSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKT-GTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYSTHNDKGEVAGKP 202
            +A+K++L    PV  T  P  + +P    PE   + +  + A D R L++G GV +   +TSC+++IVEG  +  +      I+ +GG   GE    D  I G     ++    LL+     V G + Y  ++I  GG++ G++   S H D+     KP
Sbjct:   28 VAEKKQLKPTEPVWKTTEPLRSVAPPSPAPEAEPQANSRETAADVRTLIIGPGVSVKGEITSCNRLIVEGKIEAKLADCPNVIIKQGGVFNGESTTQDADIQGCFAGNLVVRGRLLVRATGTVGGKIAYGEIEIERGGQISGEI---SDHTDEAVSHLKP 184          
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A317E6K6_9PROT (Cell shape determination protein CcmA n=1 Tax=Zavarzinia compransoris TaxID=1264899 RepID=A0A317E6K6_9PROT)

HSP 1 Score: 62.0 bits (149), Expect = 2.000e-8
Identity = 42/130 (32.31%), Postives = 62/130 (47.69%), Query Frame = 0
Query:   79 PDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFI-LAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYSTHNDKGEVAGKPQEAAA 207
            P    P+ D++ L+VG+ +VL+  +T+CDK++VEG     +     I +   G  +G     +  IGG    T+I    LLI     V G++ Y  L+I  GG L G +      N     A KP EA A
Sbjct:   33 PSAPPPSSDDKKLIVGRNIVLSGQITACDKLVVEGRVDATLTESRVIEITSTGVFKGAAEIDEALIGGVFEGTLICRGRLLIRSTGKVKGEIRYGQLEIECGGELVGDI------NTVQGQATKPAEAPA 156          
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A0M4D5U6_SPHS1 (Cell shape determination protein CcmA n=3 Tax=Sphingopyxis TaxID=165697 RepID=A0A0M4D5U6_SPHS1)

HSP 1 Score: 60.5 bits (145), Expect = 5.060e-8
Identity = 32/97 (32.99%), Postives = 58/97 (59.79%), Query Frame = 0
Query:   92 VVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTH 188
            ++G  VV+T NV +   + V+G  +G++K    +  E   ++G +      I G +  +I A KTL+I  +A + GD+VY+++ I +GG++ GKL+H
Sbjct:   40 IIGSDVVITGNVAASVDLHVDGKIEGDLKCANLVQGEASEIKGAIIAETAKIAGLLDGSIEA-KTLVIHASARITGDVVYETITIENGGKVDGKLSH 135          
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: A0A317E7N0_9PROT (Cell shape determination protein CcmA n=1 Tax=Zavarzinia aquatilis TaxID=2211142 RepID=A0A317E7N0_9PROT)

HSP 1 Score: 60.5 bits (145), Expect = 6.560e-8
Identity = 36/117 (30.77%), Postives = 56/117 (47.86%), Query Frame = 0
Query:   71 SIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFI-LAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKL 186
            S P     P    P+ D++ L+VG+ +VL+  +T+CDK++VEG     +     I +   G  +G     +  IGG     +I    LLI     V G++ Y  L+I  GG L G +
Sbjct:   24 SRPLTPATPSAPPPSSDDKKLIVGRNIVLSGQITACDKLVVEGRVDATLTESRVIEITSTGVFKGAAEIDEALIGGTFEGKLICRGRLLIRATGKVKGEIRYGQLEIECGGELVGDI 140          
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Match: D7FXL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL1_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.640e-7
Identity = 32/120 (26.67%), Postives = 62/120 (51.67%), Query Frame = 0
Query:   70 PSIPEMAVKPDLLKPAHDERVLVVGKGVVLTANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRATIIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHY 189
            P++P       LL+  +    + +G+GV+LTA+VT  + V++ G F+G +      + +G  + G + C    + G      ++S +L +   A V+G ++Y  L++  G +L G L+ Y
Sbjct:   14 PTLPTKRTVRQLLETRNTLNKMEIGQGVLLTADVTGAELVVIRGCFEGKVTAQCIDIEQGAEVRGTIECEAARVNGKFDGVFMSSHSLHLASHANVSGRIIYRRLKVAKGAQLYG-LSEY 132          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1128.816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQI6_ECTSI7.520e-6562.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYZ3_9PHAE4.270e-5858.51Reverse transcriptase domain-containing protein n=... [more]
D7FXK1_ECTSI1.940e-1235.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A239HT97_9SPHN7.640e-932.99Protein CcmA, bactofilin family n=2 Tax=Sphingopyx... [more]
A0A0W1DNC4_9SPHN7.970e-930.25Cell shape determination protein CcmA n=3 Tax=uncl... [more]
A0A537SG45_9PROT1.050e-828.75Polymer-forming cytoskeletal protein n=1 Tax=Alpha... [more]
A0A317E6K6_9PROT2.000e-832.31Cell shape determination protein CcmA n=1 Tax=Zava... [more]
A0A0M4D5U6_SPHS15.060e-832.99Cell shape determination protein CcmA n=3 Tax=Sphi... [more]
A0A317E7N0_9PROT6.560e-830.77Cell shape determination protein CcmA n=1 Tax=Zava... [more]
D7FXL1_ECTSI1.640e-726.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 92..186
e-value: 7.7E-15
score: 55.0
IPR007607Bactofilin A/BPANTHERPTHR35024FAMILY NOT NAMEDcoord: 90..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1128contigS-dermatodea_contig1128:16435..21133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1128.816.1mRNA_S-dermatodea_contig1128.816.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1128 15911..21133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1128.816.1 ID=prot_S-dermatodea_contig1128.816.1|Name=mRNA_S-dermatodea_contig1128.816.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=212bp
MSATMEKLHKKRRSFSRRPSFSLADELASAAAVTGTSNEGHTRGTSESSI
AQKEELPVTRVPSTAASPEPSIPEMAVKPDLLKPAHDERVLVVGKGVVLT
ANVTSCDKVIVEGHFQGNIKTGTFILAEGGNMEGEVRCADGCIGGNMRAT
IIASKTLLIGKAAVVAGDMVYDSLQIIDGGRLQGKLTHYSTHNDKGEVAG
KPQEAAAEAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B