mRNA_S-dermatodea_contig11258.808.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A6H5JRG4_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG4_9PHAE) HSP 1 Score: 457 bits (1176), Expect = 9.540e-154 Identity = 302/440 (68.64%), Postives = 338/440 (76.82%), Query Frame = 3
Query: 237 RTAPLL-VVLATLNFSAASLVIAAPAVQQLGRAAVTRRETREHDISLST-ARAVA-GLRAIGTRGGASGDTGKGSDEPPAPPA--GGLTATAKELLSKLLDVVGTMMGKVGSGXXXXXXXXXXXXXXXXXXXXXXXXXRGFKGSFEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKALADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARSLPFLGVVNSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKG-EGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLSSSFPKVS 1538
R PLL V L +N S A L++ A ++ + A + HD S S+ ARAVA G+R T G D G+ +DEPP P GGL AT KE +SKL VV +++G G G XXXXXXXXXXXXXXXXXXXXX GF +FEAKYGK HPKFNEKSF DATE AW RNRLCLVYIAAE+G+GGKA K+DDAICKALADP+VA F+D++FV WVPGGK++AQ A+SAAAAKRVGARSLPFLGVVNSAS TDKMTLER LERSTV +HHC PPPS QMVSW+ RVL+L K LLE ELAEQQRL+DEDTI+TERVEGYSKSLKDDALREVRE+EEEAE XXXXXXXXXXX KA ELGQEP ESA KG E A+TLMLRLADGSR+RRRFLRSDPMGKVLDWADVQGVDL+AQRLSS+ PK S
Sbjct: 17 RAGPLLFVALVAVNLSTAPLLVTAKSLPRSRWVAASSNGGSLHDSSASSNARAVAVGVRCGATSSGKE-DEGEDTDEPPRSPLSEGGLAATVKETISKLTGVVRSLLG--GKGSKSGXXXXXXXXXXXXXXXXXXXXXGGFTEAFEAKYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRVAASAAAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAEXXXXXXXXXXXXXVLEAKQREDVERREKKAAELGQEPPESAVKGAEAKAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKAS 453
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: D7FVT5_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT5_ECTSI) HSP 1 Score: 244 bits (624), Expect = 1.470e-74 Identity = 132/184 (71.74%), Postives = 142/184 (77.17%), Query Frame = 3
Query: 990 MTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKG-EGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLSSSFPKVS 1538
MTLER LERSTV +HHC PPPS QMVSW+ RVL+L K LLE ELAEQQRL+DEDTI+TERVEGYSKSLKDDALREVRE+EEEAERA KA ELGQEP ESA KG E TA+TLMLRLADGSR+RRRFLRSDPMGKVLDWADVQGVDL+AQRLSS+ PK S
Sbjct: 1 MTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKSLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAERARLAEEQRVAQEALEAKLREDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKAS 184
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A835Z0S3_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S3_9STRA) HSP 1 Score: 171 bits (432), Expect = 2.750e-44 Identity = 122/294 (41.50%), Postives = 171/294 (58.16%), Query Frame = 3
Query: 636 RGFKGSFEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKALADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARSLPFLGVVNSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLS 1517
+G F +YG HP F E ++ ATE A N+ LV++ +E+G GK + DDAI ++ DP V +F++ +F+ + G + S A AA+R GA+SLP+LGV+ T+ + +R+ VGLHHC PPPS +V W++++L++ G+LE + E RL E + ER +GY++++ D + +EK E A +A XXXXXXXXXXXXXX LG EPA AA A + LRL DG R RRRFL SD ++ DWADV GV+LEA RLS
Sbjct: 68 KGLTARFARRYGAKHPIFFEGTYKQATEAALRANKFTLVFLTSEKG--GKKSRADDAIARSFTDPAVISFINEHFILFAAAGPSP-----SGADAARRTGAKSLPYLGVIR--------TVAKDSKRALVGLHHCNPPPSAGGLVKWMSQLLEVKGGVLEADKTELARLAVEANLAKERQKGYAEAVMVDQKQIRKEKREAAAKAKEEAERLAAEAAXXXXXXXXXXXXXXXXXXLGDEPAAGAA---AAAVEVALRLPDGRRERRRFLLSDDTERLYDWADVLGVELEASRLS 343
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A7S3EE78_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EE78_9RHOD) HSP 1 Score: 70.5 bits (171), Expect = 2.620e-9 Identity = 91/297 (30.64%), Postives = 133/297 (44.78%), Query Frame = 3
Query: 654 FEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICK-ALADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRV-GARSLPFLGVVNSA-STTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEG-YSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLSSSFPK 1532
F+ Y HP+F E ++ +A A R + LV++ +E C+ L +V ++D N + W G +A+ A+R+ G + PF+ ++ S +D +TL S G + W+ + + G T RDE E+ + Y ++L+ D RE KE + A XXXXXXXXXXX K LG+EP KG G +T+ LRL DG RV RRFL SD + + DWAD+ GV +E L SSFP+
Sbjct: 143 FDILYSNLHPRFFEGTYLEALAAAGARFQFLLVFLHSEMHPASVR------FCRQVLGSREVIRYIDENVIFWARG------IASPEGYRAQRLLGVTTYPFVALITSPPGRSDGVTLSEY--NSDAG-----------DFLQWL-QTMSARFGTTLTRRRLHVEERDEARQLREQQDREYHETLEADRRREQAAKEAAEQAAEQERLKREXXXXXXXXXXXLVERREGKRVALGEEPE----KGPGV-TTIGLRLPDGKRVDRRFLVSDKVAILFDWADINGVSIEHAALVSSFPR 408
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A152AA02_9MYCE (UAS domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152AA02_9MYCE) HSP 1 Score: 62.8 bits (151), Expect = 5.340e-7 Identity = 81/297 (27.27%), Postives = 139/297 (46.80%), Query Frame = 3
Query: 663 KYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKA-LADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARSLPFLGVV--NSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVD-LEAQRLSSSFPKVSL 1541
+YG +HP F + S+ +A A ++ ++ L+YI + + + CK L + F+D+ +V W T+ +A + A + P+LG++ NS S + T + + S V L + DQ++S +T + ++ L +EQ + + I E+ E Y SLK D +E XXXXXXXXX XX K QEP G S + ++L+DG+R++R FL++D +G ++D+ D + + ++ L +S+PK SL
Sbjct: 54 RYGSTHPSFRQGSYNEAVSFAKSKFKILLIYIHSSKHPNSQQ------FCKEILFTREFKEFIDSTYVIWACDISTSIGFKVFNA-----MRASTFPYLGMLCCNSISGLTQGTQTKIEDFSGVSLQLPR-----DQIMSNMTGIYEIYGPHLVVAKSEQDQREQDRFIRQEQDEAYLISLKQDQEKERLXXXXXXXXXXXXXXXXXXEXXRLQKESEMLDRKESKKIRFEQEPT-------GPVSKVAIKLSDGTRIQRNFLKTDTIGDIMDYIDTKIQEPIDNYILMTSYPKKSL 327
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A5J4Z6R3_PORPP (FAS-associated factor 2-B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6R3_PORPP) HSP 1 Score: 61.6 bits (148), Expect = 1.830e-6 Identity = 100/300 (33.33%), Postives = 143/300 (47.67%), Query Frame = 3
Query: 654 FEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKA-LADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARS------LPFLGVVNSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLSSSFPK 1532
FEA +G +H +F S A A + LVYI E + ++ C++ L D +V F+D F+ W A+S A+ V ARS LP L +V T + + + G P + W+ RV + L + +Q+ + ++ E + ++L++ XXXXXXXXXXXXXXXXXXXXXXXXX K E LG+EP A+G TAS ++LR+ DGSR RRFLR + + DWAD GV++ L SS+P+
Sbjct: 159 FEASFGNTHARFTRTSLVQALRTAGREYKFALVYIHDENR------EACNSFCRSVLQDGQVIRFIDEAFIFW-----------AASTRFAETVQARSEFRLTHLPALAIVEGHPTRPPGRVIAMKQANAFG-----GPMDAAGVFQWMQRVQERYGVSLISARIQQEERETNRLLRQQQDEEFQRALEEXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXRKQELLGEEPP---AQGAVTAS-VVLRMPDGSRNTRRFLRDTKLEMLFDWADTLGVEIGQALLVSSYPR 425
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A8J4ZWL7_9CHEL (FAS-associated factor 2-B n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZWL7_9CHEL) HSP 1 Score: 60.5 bits (145), Expect = 4.290e-6 Identity = 88/269 (32.71%), Postives = 135/269 (50.19%), Query Frame = 3
Query: 651 SFEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKALADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARSLPFLGVVNSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPM 1457
S+ KYG HP F + +++ A A + LVY+ ++ D LA+ + FV+ N + W T S A R G + PF+ V+ +KMT+ L S SPD+++S +T V+ N+ L A+++ T+ ++ E Y +SLK D +E +++ XXXXXXXXXXXXXXXXXXXXXXX E++ EPAE+ + A +M++L +G+R+ RRFL+S P+
Sbjct: 151 SYNEKYGSRHPVFYQGTYSQALNDAKRELKFLLVYLHSDDHQ-----HTQDFCLNTLANQSIIDFVNVNLLFWACSVTTTEGYRVSQAL---REG--TYPFMAVI--VLRQNKMTIVARLSGSI----------SPDELISELTNVMADNESSLVVARADREERSLNQTLRRQQDEAYEESLKADQEKERKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDLIEQIPAEPAEN----DPDAVRIMIKLPNGARLDRRFLKSHPL 393 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11258.808.1 >prot_S-dermatodea_contig11258.808.1 ID=prot_S-dermatodea_contig11258.808.1|Name=mRNA_S-dermatodea_contig11258.808.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=446bp MGTLRGHRRRSRTAPLLVVLATLNFSAASLVIAAPAVQQLGRAAVTRRETback to top mRNA from alignment at S-dermatodea_contig11258:2567..6930+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11258.808.1 ID=mRNA_S-dermatodea_contig11258.808.1|Name=mRNA_S-dermatodea_contig11258.808.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4364bp|location=Sequence derived from alignment at S-dermatodea_contig11258:2567..6930+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11258:2567..6930+ >mRNA_S-dermatodea_contig11258.808.1 ID=mRNA_S-dermatodea_contig11258.808.1|Name=mRNA_S-dermatodea_contig11258.808.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2676bp|location=Sequence derived from alignment at S-dermatodea_contig11258:2567..6930+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |