prot_S-dermatodea_contig11258.808.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11258.808.1
Unique Nameprot_S-dermatodea_contig11258.808.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length446
Homology
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A6H5JRG4_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG4_9PHAE)

HSP 1 Score: 457 bits (1176), Expect = 8.720e-155
Identity = 302/440 (68.64%), Postives = 338/440 (76.82%), Query Frame = 0
Query:   12 RTAPLL-VVLATLNFSAASLVIAAPAVQQLGRAAVTRRETREHDISLST-ARAVA-GLRAIGTRGGASGDTGKGSDEPPAPPA--GGLTATAKELLSKLLDVVGTMMGKVGSGXXXXXXXXXXXXXXXXXXXXXXXXXRGFKGSFEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKALADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARSLPFLGVVNSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKG-EGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLSSSFPKVS 445
            R  PLL V L  +N S A L++ A ++ +    A +      HD S S+ ARAVA G+R   T  G   D G+ +DEPP  P   GGL AT KE +SKL  VV +++G  G G    XXXXXXXXXXXXXXXXXXXXX GF  +FEAKYGK HPKFNEKSF DATE AW RNRLCLVYIAAE+G+GGKA K+DDAICKALADP+VA F+D++FV WVPGGK++AQ  A+SAAAAKRVGARSLPFLGVVNSAS TDKMTLER LERSTV +HHC PPPS  QMVSW+ RVL+L K LLE ELAEQQRL+DEDTI+TERVEGYSKSLKDDALREVRE+EEEAE  XXXXXXXXXXX               KA ELGQEP ESA KG E  A+TLMLRLADGSR+RRRFLRSDPMGKVLDWADVQGVDL+AQRLSS+ PK S
Sbjct:   17 RAGPLLFVALVAVNLSTAPLLVTAKSLPRSRWVAASSNGGSLHDSSASSNARAVAVGVRCGATSSGKE-DEGEDTDEPPRSPLSEGGLAATVKETISKLTGVVRSLLG--GKGSKSGXXXXXXXXXXXXXXXXXXXXXGGFTEAFEAKYGKRHPKFNEKSFGDATETAWGRNRLCLVYIAAEKGSGGKAAKVDDAICKALADPEVAEFIDSSFVMWVPGGKSSAQRVAASAAAAKRVGARSLPFLGVVNSASETDKMTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKNLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAEXXXXXXXXXXXXXVLEAKQREDVERREKKAAELGQEPPESAVKGAEAKAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKAS 453          
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: D7FVT5_ECTSI (UBX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT5_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 2.280e-75
Identity = 132/184 (71.74%), Postives = 142/184 (77.17%), Query Frame = 0
Query:  263 MTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKG-EGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLSSSFPKVS 445
            MTLER LERSTV +HHC PPPS  QMVSW+ RVL+L K LLE ELAEQQRL+DEDTI+TERVEGYSKSLKDDALREVRE+EEEAERA                          KA ELGQEP ESA KG E TA+TLMLRLADGSR+RRRFLRSDPMGKVLDWADVQGVDL+AQRLSS+ PK S
Sbjct:    1 MTLERKLERSTVAMHHCNPPPSASQMVSWMARVLELKKSLLEVELAEQQRLKDEDTIYTERVEGYSKSLKDDALREVREREEEAERARLAEEQRVAQEALEAKLREDVERREKKAAELGQEPPESAVKGAEATAATLMLRLADGSRIRRRFLRSDPMGKVLDWADVQGVDLDAQRLSSTMPKAS 184          
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A835Z0S3_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S3_9STRA)

HSP 1 Score: 171 bits (432), Expect = 6.880e-45
Identity = 122/294 (41.50%), Postives = 171/294 (58.16%), Query Frame = 0
Query:  145 RGFKGSFEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKALADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARSLPFLGVVNSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLS 438
            +G    F  +YG  HP F E ++  ATE A   N+  LV++ +E+G  GK  + DDAI ++  DP V +F++ +F+ +   G +      S A AA+R GA+SLP+LGV+         T+ +  +R+ VGLHHC PPPS   +V W++++L++  G+LE +  E  RL  E  +  ER +GY++++  D  +  +EK E A +A            XXXXXXXXXXXXXX    LG EPA  AA     A  + LRL DG R RRRFL SD   ++ DWADV GV+LEA RLS
Sbjct:   68 KGLTARFARRYGAKHPIFFEGTYKQATEAALRANKFTLVFLTSEKG--GKKSRADDAIARSFTDPAVISFINEHFILFAAAGPSP-----SGADAARRTGAKSLPYLGVIR--------TVAKDSKRALVGLHHCNPPPSAGGLVKWMSQLLEVKGGVLEADKTELARLAVEANLAKERQKGYAEAVMVDQKQIRKEKREAAAKAKEEAERLAAEAAXXXXXXXXXXXXXXXXXXLGDEPAAGAA---AAAVEVALRLPDGRRERRRFLLSDDTERLYDWADVLGVELEASRLS 343          
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A7S3EE78_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EE78_9RHOD)

HSP 1 Score: 70.5 bits (171), Expect = 1.940e-9
Identity = 91/297 (30.64%), Postives = 133/297 (44.78%), Query Frame = 0
Query:  151 FEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICK-ALADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRV-GARSLPFLGVVNSA-STTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEG-YSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLSSSFPK 443
            F+  Y   HP+F E ++ +A   A  R +  LV++ +E              C+  L   +V  ++D N + W  G      +A+     A+R+ G  + PF+ ++ S    +D +TL      S  G             + W+ + +    G   T        RDE     E+ +  Y ++L+ D  RE   KE   + A        XXXXXXXXXXX       K   LG+EP     KG G  +T+ LRL DG RV RRFL SD +  + DWAD+ GV +E   L SSFP+
Sbjct:  143 FDILYSNLHPRFFEGTYLEALAAAGARFQFLLVFLHSEMHPASVR------FCRQVLGSREVIRYIDENVIFWARG------IASPEGYRAQRLLGVTTYPFVALITSPPGRSDGVTLSEY--NSDAG-----------DFLQWL-QTMSARFGTTLTRRRLHVEERDEARQLREQQDREYHETLEADRRREQAAKEAAEQAAEQERLKREXXXXXXXXXXXLVERREGKRVALGEEPE----KGPGV-TTIGLRLPDGKRVDRRFLVSDKVAILFDWADINGVSIEHAALVSSFPR 408          
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A152AA02_9MYCE (UAS domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152AA02_9MYCE)

HSP 1 Score: 62.8 bits (151), Expect = 4.170e-7
Identity = 81/297 (27.27%), Postives = 139/297 (46.80%), Query Frame = 0
Query:  154 KYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKA-LADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARSLPFLGVV--NSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVD-LEAQRLSSSFPKVSL 446
            +YG +HP F + S+ +A   A ++ ++ L+YI + +    +        CK  L   +   F+D+ +V W     T+      +A     + A + P+LG++  NS S   + T  +  + S V L   +     DQ++S +T + ++    L    +EQ +   +  I  E+ E Y  SLK D  +E           XXXXXXXXX XX              K     QEP        G  S + ++L+DG+R++R FL++D +G ++D+ D +  + ++   L +S+PK SL
Sbjct:   54 RYGSTHPSFRQGSYNEAVSFAKSKFKILLIYIHSSKHPNSQQ------FCKEILFTREFKEFIDSTYVIWACDISTSIGFKVFNA-----MRASTFPYLGMLCCNSISGLTQGTQTKIEDFSGVSLQLPR-----DQIMSNMTGIYEIYGPHLVVAKSEQDQREQDRFIRQEQDEAYLISLKQDQEKERLXXXXXXXXXXXXXXXXXXEXXRLQKESEMLDRKESKKIRFEQEPT-------GPVSKVAIKLSDGTRIQRNFLKTDTIGDIMDYIDTKIQEPIDNYILMTSYPKKSL 327          
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A5J4Z6R3_PORPP (FAS-associated factor 2-B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6R3_PORPP)

HSP 1 Score: 61.6 bits (148), Expect = 1.400e-6
Identity = 100/300 (33.33%), Postives = 143/300 (47.67%), Query Frame = 0
Query:  151 FEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKA-LADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARS------LPFLGVVNSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLSSSFPK 443
            FEA +G +H +F   S   A   A    +  LVYI  E        +  ++ C++ L D +V  F+D  F+ W           A+S   A+ V ARS      LP L +V    T     +    + +  G      P     +  W+ RV +     L +   +Q+       +  ++ E + ++L++                XXXXXXXXXXXXXXXXXXXXXXXXX K E LG+EP    A+G  TAS ++LR+ DGSR  RRFLR   +  + DWAD  GV++    L SS+P+
Sbjct:  159 FEASFGNTHARFTRTSLVQALRTAGREYKFALVYIHDENR------EACNSFCRSVLQDGQVIRFIDEAFIFW-----------AASTRFAETVQARSEFRLTHLPALAIVEGHPTRPPGRVIAMKQANAFG-----GPMDAAGVFQWMQRVQERYGVSLISARIQQEERETNRLLRQQQDEEFQRALEEXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXRKQELLGEEPP---AQGAVTAS-VVLRMPDGSRNTRRFLRDTKLEMLFDWADTLGVEIGQALLVSSYPR 425          
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Match: A0A8J4ZWL7_9CHEL (FAS-associated factor 2-B n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZWL7_9CHEL)

HSP 1 Score: 60.5 bits (145), Expect = 3.290e-6
Identity = 88/269 (32.71%), Postives = 135/269 (50.19%), Query Frame = 0
Query:  150 SFEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDDAICKALADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARSLPFLGVVNSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNKGLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAXXXXXXXXXXXXXXXXXXXXXXXXXXKAEELGQEPAESAAKGEGTASTLMLRLADGSRVRRRFLRSDPM 418
            S+  KYG  HP F + +++ A   A    +  LVY+ ++           D     LA+  +  FV+ N + W     T      S A    R G  + PF+ V+      +KMT+   L  S           SPD+++S +T V+  N+  L    A+++      T+  ++ E Y +SLK D  +E +++       XXXXXXXXXXXXXXXXXXXXXXX     E++  EPAE+    +  A  +M++L +G+R+ RRFL+S P+
Sbjct:  151 SYNEKYGSRHPVFYQGTYSQALNDAKRELKFLLVYLHSDDHQ-----HTQDFCLNTLANQSIIDFVNVNLLFWACSVTTTEGYRVSQAL---REG--TYPFMAVI--VLRQNKMTIVARLSGSI----------SPDELISELTNVMADNESSLVVARADREERSLNQTLRRQQDEAYEESLKADQEKERKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDLIEQIPAEPAEN----DPDAVRIMIKLPNGARLDRRFLKSHPL 393          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11258.808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JRG4_9PHAE8.720e-15568.64UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVT5_ECTSI2.280e-7571.74UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z0S3_9STRA6.880e-4541.50UBX domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3EE78_9RHOD1.940e-930.64Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A152AA02_9MYCE4.170e-727.27UAS domain-containing protein n=1 Tax=Tieghemostel... [more]
A0A5J4Z6R3_PORPP1.400e-633.33FAS-associated factor 2-B n=1 Tax=Porphyridium pur... [more]
A0A8J4ZWL7_9CHEL3.290e-632.71FAS-associated factor 2-B n=1 Tax=Nymphon striatum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 332..383
NoneNo IPR availableGENE3D3.10.20.90coord: 394..446
e-value: 4.2E-10
score: 41.5
NoneNo IPR availableGENE3D3.40.30.10coord: 131..297
e-value: 1.3E-10
score: 43.1
NoneNo IPR availablePANTHERPTHR23322FAS-ASSOCIATED PROTEINcoord: 129..443
NoneNo IPR availablePANTHERPTHR23322:SF1FAS-ASSOCIATED FACTOR, ISOFORM Acoord: 129..443
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..446
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.729
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR001012UBX domainPFAMPF00789UBXcoord: 394..444
e-value: 6.9E-7
score: 29.4
IPR001012UBX domainPROSITEPS50033UBXcoord: 391..446
score: 12.882
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 354..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11258contigS-dermatodea_contig11258:2770..6930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11258.808.1mRNA_S-dermatodea_contig11258.808.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11258 2567..6930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11258.808.1 ID=prot_S-dermatodea_contig11258.808.1|Name=mRNA_S-dermatodea_contig11258.808.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=446bp
MGTLRGHRRRSRTAPLLVVLATLNFSAASLVIAAPAVQQLGRAAVTRRET
REHDISLSTARAVAGLRAIGTRGGASGDTGKGSDEPPAPPAGGLTATAKE
LLSKLLDVVGTMMGKVGSGSGDGGGRKTKAKAKSSKKSEGKSNGRGFKGS
FEAKYGKSHPKFNEKSFADATEHAWTRNRLCLVYIAAERGAGGKAVKIDD
AICKALADPKVATFVDANFVTWVPGGKTAAQLAASSAAAAKRVGARSLPF
LGVVNSASTTDKMTLERTLERSTVGLHHCKPPPSPDQMVSWVTRVLDLNK
GLLETELAEQQRLRDEDTIFTERVEGYSKSLKDDALREVREKEEEAERAR
LEEEERVAQEAREAKEREDVERRERKAEELGQEPAESAAKGEGTASTLML
RLADGSRVRRRFLRSDPMGKVLDWADVQGVDLEAQRLSSSFPKVSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001012UBX_dom
IPR029071Ubiquitin-like_domsf