mRNA_S-dermatodea_contig11211.780.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11211.780.1
Unique NamemRNA_S-dermatodea_contig11211.780.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: D8LE56_ECTSI (TFIIS-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE56_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 1.000e-75
Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 2 
Query:  158 MADTMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 511
            MADTMRFCSECNNIM+PKENK DRKLMY+C+RC Y+E A+SGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS
Sbjct:  120 MADTMRFCSECNNIMHPKENKTDRKLMYSCNRCKYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 237
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BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: A0A835YYP5_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYP5_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.340e-48
Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 2 
Query:  170 MRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWV 508
            MRFC ECNNI++PKEN+  R L YAC+RC Y+E A   SCVY NNL+ T   KLDIV  DVV+DPTLQRSK+ IC++CNY+EAVFFQAD+ AKS SLSLIFVCT+  CG KWV
Sbjct:    1 MRFCKECNNILHPKENRTTRTLFYACNRCAYREEAGQ-SCVYENNLVKTTELKLDIVHEDVVNDPTLQRSKHQICDRCNYSEAVFFQADDSAKSSSLSLIFVCTH--CGKKWV 110
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BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: A0A1B6PTV6_SORBI (DNA-directed RNA polymerase subunit n=2 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PTV6_SORBI)

HSP 1 Score: 125 bits (315), Expect = 2.130e-33
Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 2 
Query:  167 TMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 505
            TMRFC ECNNI+YPKE++A++ L+YAC  C +QE A+S +CVYRN +   AG    ++  DV  DPTL R+K+  C  C + EAVFFQA    +   ++L FVC N +CGH+W
Sbjct:    3 TMRFCRECNNILYPKEDRANKVLLYACRNCEHQEVADS-NCVYRNVVDHDAGELTQVLSEDVASDPTLPRTKSVRCAACGHGEAVFFQATTRGED-GMALFFVCCNPSCGHRW 113
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BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: A0A2I4F1N3_JUGRE (DNA-directed RNA polymerase subunit n=38 Tax=Magnoliopsida TaxID=3398 RepID=A0A2I4F1N3_JUGRE)

HSP 1 Score: 125 bits (314), Expect = 2.930e-33
Identity = 57/113 (50.44%), Postives = 80/113 (70.80%), Query Frame = 2 
Query:  167 TMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 505
            TM+FC ECNNI+YPKE+K  + L+YAC  C +QEAA++ +CVYRN +  + G +  ++Q DV  DPTL R+K+  C +CN+ EAVFFQA    + + ++L FVC N  CGH+W
Sbjct:    3 TMKFCRECNNILYPKEDKEQKILLYACRNCDHQEAADN-NCVYRNEIHHSVGERTQVLQ-DVAADPTLPRTKSVRCAECNHGEAVFFQATARGE-EGMTLFFVCCNPNCGHRW 112
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BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: A0A6P5Z8D8_DURZI (DNA-directed RNA polymerase subunit n=2 Tax=Malvaceae TaxID=3629 RepID=A0A6P5Z8D8_DURZI)

HSP 1 Score: 125 bits (313), Expect = 4.140e-33
Identity = 58/113 (51.33%), Postives = 78/113 (69.03%), Query Frame = 2 
Query:  167 TMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 505
            TM+FC ECNNI+YPKE++  + L+YAC  C +QE AE  +CVYRN +  +AG +  I+Q DV  DPTL R+K+ IC  C + EAVFFQA    + + ++L FVC N  CGH+W
Sbjct:    3 TMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAED-NCVYRNEVHHSAGERTQILQ-DVAADPTLPRTKSVICANCKHGEAVFFQATARGE-EGMTLFFVCCNPNCGHRW 112
[Close]
BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: A0A0K9RIQ4_SPIOL (DNA-directed RNA polymerase subunit n=3 Tax=Spermatophyta TaxID=58024 RepID=A0A0K9RIQ4_SPIOL)

HSP 1 Score: 124 bits (312), Expect = 5.850e-33
Identity = 57/113 (50.44%), Postives = 78/113 (69.03%), Query Frame = 2 
Query:  167 TMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 505
            TM+FC ECNNI+YPKE+K  + L YAC  C +QE AE+ +CVYRN +    G +  ++Q DV  DPTL R+K+  C +CN+ EAVFFQA    + + ++L FVC N +CGH+W
Sbjct:    3 TMKFCRECNNILYPKEDKDQKILQYACRNCDHQEIAEN-NCVYRNEIHHAVGERTQVLQ-DVAADPTLPRTKSVRCTQCNHGEAVFFQATSRGE-EGMTLFFVCCNPSCGHRW 112
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BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: A0A5D2M575_GOSTO (DNA-directed RNA polymerase subunit n=2 Tax=Gossypium TaxID=3633 RepID=A0A5D2M575_GOSTO)

HSP 1 Score: 126 bits (316), Expect = 5.880e-33
Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = 2 
Query:  149 FATMADTMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 505
            F+    TM+FC ECNNI+YPKE++  + L+YAC  C +QE AE+ +CVYRN +  +AG +  I+Q DV  DPTL R+K  IC  C + EAVFFQA    + + ++L FVC N  CGH+W
Sbjct:   44 FSNKMSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAEN-NCVYRNEVHHSAGERTQILQ-DVAADPTLPRTKAVICANCKHGEAVFFQATARGE-EGMTLFFVCCNPNCGHRW 159
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BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: A0A6P4PU27_GOSAR (DNA-directed RNA polymerase subunit n=7 Tax=Gossypium TaxID=3633 RepID=A0A6P4PU27_GOSAR)

HSP 1 Score: 124 bits (311), Expect = 8.260e-33
Identity = 58/113 (51.33%), Postives = 78/113 (69.03%), Query Frame = 2 
Query:  167 TMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 505
            TM+FC ECNNI+YPKE++  + L+YAC  C +QE AE+ +CVYRN +  +AG +  I+Q DV  DPTL R+K  IC  C + EAVFFQA    + + ++L FVC N  CGH+W
Sbjct:    3 TMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAEN-NCVYRNEVHHSAGERTQILQ-DVAADPTLPRTKAVICANCKHGEAVFFQATARGE-EGMTLFFVCCNPNCGHRW 112
[Close]
BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: A0A6J1AX74_9ROSI (DNA-directed RNA polymerase subunit n=2 Tax=Malvaceae TaxID=3629 RepID=A0A6J1AX74_9ROSI)

HSP 1 Score: 124 bits (311), Expect = 8.260e-33
Identity = 57/113 (50.44%), Postives = 79/113 (69.91%), Query Frame = 2 
Query:  167 TMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 505
            TM+FC ECNNI+YPKE++  + L+YAC  C +QE A++ +CVYRN +  +AG +  I+Q DV  DPTL R+K+ IC  C + EAVFFQA    + + ++L FVC N  CGH+W
Sbjct:    3 TMKFCRECNNILYPKEDREQKILLYACRNCDHQEVADN-NCVYRNEVHHSAGERTQILQ-DVAADPTLPRTKSVICANCKHGEAVFFQATARGE-EGMTLFFVCCNPNCGHRW 112
[Close]
BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Match: A0A5J5WUC6_GOSBA (TFIIS-type domain-containing protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A5J5WUC6_GOSBA)

HSP 1 Score: 126 bits (316), Expect = 8.290e-33
Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = 2 
Query:  149 FATMADTMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 505
            F+    TM+FC ECNNI+YPKE++  + L+YAC  C +QE AE+ +CVYRN +  +AG +  I+Q DV  DPTL R+K  IC  C + EAVFFQA    + + ++L FVC N  CGH+W
Sbjct:   56 FSNKMSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAEN-NCVYRNEVHHSAGERTQILQ-DVAADPTLPRTKAVICANCKHGEAVFFQATARGE-EGMTLFFVCCNPNCGHRW 171
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11211.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE56_ECTSI1.000e-7593.22TFIIS-type domain-containing protein n=1 Tax=Ectoc... [more]
A0A835YYP5_9STRA4.340e-4868.14DNA-directed RNA polymerase subunit n=1 Tax=Tribon... [more]
A0A1B6PTV6_SORBI2.130e-3350.44DNA-directed RNA polymerase subunit n=2 Tax=Androp... [more]
A0A2I4F1N3_JUGRE2.930e-3350.44DNA-directed RNA polymerase subunit n=38 Tax=Magno... [more]
A0A6P5Z8D8_DURZI4.140e-3351.33DNA-directed RNA polymerase subunit n=2 Tax=Malvac... [more]
A0A0K9RIQ4_SPIOL5.850e-3350.44DNA-directed RNA polymerase subunit n=3 Tax=Sperma... [more]
A0A5D2M575_GOSTO5.880e-3349.58DNA-directed RNA polymerase subunit n=2 Tax=Gossyp... [more]
A0A6P4PU27_GOSAR8.260e-3351.33DNA-directed RNA polymerase subunit n=7 Tax=Gossyp... [more]
A0A6J1AX74_9ROSI8.260e-3350.44DNA-directed RNA polymerase subunit n=2 Tax=Malvac... [more]
A0A5J5WUC6_GOSBA8.290e-3349.58TFIIS-type domain-containing protein n=3 Tax=Gossy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11211contigS-dermatodea_contig11211:2208..5455 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.5
Seed ortholog evalue6.4e-60
Seed eggNOG ortholog2880.D8LE56
Preferred namePOLR2I
KEGG rclassRC02795
KEGG koko:K03017
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG ModuleM00180
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000428,GO:0001192,GO:0001193,GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006354,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008270,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0042221,GO:0042795,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
EggNOG OGsCOG1594@1,KOG2691@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, TFIIS-type
Ec32 orthologEc-00_001020.1
Exons5
Model size708
Cds size357
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924192.102096-UTR-S-dermatodea_contig11211:2207..24011622924192.102096-UTR-S-dermatodea_contig11211:2207..2401Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11211 2208..2401 -
1694079081.698384-UTR-S-dermatodea_contig11211:2207..24011694079081.698384-UTR-S-dermatodea_contig11211:2207..2401Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11211 2208..2401 -
1622924192.1610663-UTR-S-dermatodea_contig11211:5298..54551622924192.1610663-UTR-S-dermatodea_contig11211:5298..5455Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11211 5299..5455 -
1694079081.7605102-UTR-S-dermatodea_contig11211:5298..54551694079081.7605102-UTR-S-dermatodea_contig11211:5298..5455Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11211 5299..5455 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924192.1115365-CDS-S-dermatodea_contig11211:2401..24761622924192.1115365-CDS-S-dermatodea_contig11211:2401..2476Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 2402..2476 -
1694079081.7162304-CDS-S-dermatodea_contig11211:2401..24761694079081.7162304-CDS-S-dermatodea_contig11211:2401..2476Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 2402..2476 -
1622924192.121168-CDS-S-dermatodea_contig11211:3506..36241622924192.121168-CDS-S-dermatodea_contig11211:3506..3624Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 3507..3624 -
1694079081.7271528-CDS-S-dermatodea_contig11211:3506..36241694079081.7271528-CDS-S-dermatodea_contig11211:3506..3624Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 3507..3624 -
1622924192.1316473-CDS-S-dermatodea_contig11211:3955..40871622924192.1316473-CDS-S-dermatodea_contig11211:3955..4087Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 3956..4087 -
1694079081.7357826-CDS-S-dermatodea_contig11211:3955..40871694079081.7357826-CDS-S-dermatodea_contig11211:3955..4087Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 3956..4087 -
1622924192.142805-CDS-S-dermatodea_contig11211:4704..47351622924192.142805-CDS-S-dermatodea_contig11211:4704..4735Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 4705..4735 -
1694079081.7456965-CDS-S-dermatodea_contig11211:4704..47351694079081.7456965-CDS-S-dermatodea_contig11211:4704..4735Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 4705..4735 -
1622924192.151144-CDS-S-dermatodea_contig11211:5297..52981622924192.151144-CDS-S-dermatodea_contig11211:5297..5298Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 5298..5298 -
1694079081.7531252-CDS-S-dermatodea_contig11211:5297..52981694079081.7531252-CDS-S-dermatodea_contig11211:5297..5298Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11211 5298..5298 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11211.780.1prot_S-dermatodea_contig11211.780.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11211 2402..5298 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11211.780.1

>prot_S-dermatodea_contig11211.780.1 ID=prot_S-dermatodea_contig11211.780.1|Name=mRNA_S-dermatodea_contig11211.780.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=119bp
MADTMRFCSECNNIMYPKENKADRKLMYACSRCTYQEAAESGSCVYRNNL
ITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQS
LSLIFVCTNRACGHKWVS*
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mRNA from alignment at S-dermatodea_contig11211:2208..5455-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11211.780.1 ID=mRNA_S-dermatodea_contig11211.780.1|Name=mRNA_S-dermatodea_contig11211.780.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3248bp|location=Sequence derived from alignment at S-dermatodea_contig11211:2208..5455- (Saccorhiza dermatodea SderLu1190fm monoicous)
AACAGGCAGGCGACGTTCTGGGCTGTGGTCAGCTGTGATCCATCTGAACC
TGTAGAATCAAGAAGGTGCAAGCCATCACCAGGCAACGTTGTGAGCCTGT
CAGGTTTTGGCCAGCAAATTTCCCTTTCAAGGGGGTCTCTCCATTACTTT
CGCGACAAGTGAGTGCTGCGAGTTTTCGAGGGCTGTGCTGCTGTAACTTG
TAGCAAGCTGTTACAGCAAGTGTTGCTTCCATGGACCGGTGTATCAGCCA
TATGGTGGTGTTTGTGGTCAGGTCCAGCGAGCGATGCGCCCGCTCCTCTA
CGGTGTTTGCCTGGCTCCACTTCCCGACATCACTCTCCGACTGGGTGTTT
GATCCACTGGGTGTGTCCCAGGGGCTTGCTCTCCTCTGTGTCTGCCTCAT
GCGATTGAGGTGTCGAGCTGAACGTGAGCATTGCGACTTGCTGCTGCCAC
CGCGATTATTGCTTGCTTCCGTGCGGCGCGTGTGAGACGCCGTGCTGTGA
AGTCGTGACGCCTTCAAAGAACGATCGTCGAGGATGTATTGCCTCGTCTC
CCCTCGTAGGTGGGGTTCGAGATAGATGTTGATTGCCCCAGGTCCGTCTA
TCTGATGCCCTCTGCACCCTCTACCCCCCCCCCCCTCCACTCTGCGCTCG
TCTGGCGGCTCTATCCCGTCTACTCGCTGCCTGCTGCCGTGGTGCTGTGC
TCCATATGGCAACCTCACAGTGGCGGACACTATGCGATTCTGTAGCGAGT
GGTGAGTGTACAAGGAGTGCTCAAGACACTTGGAGCATTTATACTTATAT
CATAGTAATTGCTAATTACCCTTCGTTTCCGATGTGTACACTTTGTACAT
GTATACATAGCTCTAGAGCAGTAGAGCTCGGACCCGAGACAGTCCGGGCA
GAAGCCGAGATCGTTCCTTGCAGCCAGACTCCAGACGAACAGCAGCACTA
AAACAGCATTCTTCGGAGAGCTTTGCACAAAGAGCTTACTTTTTGTTGCC
TTCGCCTCCCCCGCGTGTGGTTCTGGGTTGTTCGCCTGTTCGGTTGCTGT
GTTTTTTCGAGCTCAGAGACATGTGTTGGACCTCACAATGCTCGGGAGCA
CCCCAGCGGTATTCAGCGGTAATCTACAAAGGAGTTCTCGTTGGCGTTCC
TGGGCCTTTCTCACGCACCACGACTGGCGCTGCTTTTGGTTTTACTAAGA
CCCACAGCGCGCTTATTTTGCCAATATATGTTTGGGCAAGTTGGGGCCTC
TATCACGTGCACTATAATAGTGCTGTCCATGCGGACATCGATGGCGAACT
GTGTGACGGCAACGCTTGTCGTGTGCTTTTCCATTGCTGTGCCTCGTCTC
TTCCTCTGGTCCCTGCAGCAACAACATTATGTACCCGAAAGAGAACAAAG
CGGACCGGAAATTGATGTACGCGTGCAGCCGGTGTACCTACCAGGAGGCC
GCGGAGTCGGGGTCTTGCGTCTACAGGAATAACCTCATCACCACAGCAGG
GTATGTGTTGGACTGTAAAGTGGCGGTGCGTTCCTTGGCATTGTGTACAT
ATATCCACGTCGAGATCAACAAATTGATTGCCGTGAACGAGATGTCTCTC
TGGTAGGGCTCCAGATGTAGTCGCGCATTTGTTGTGACTGTCTCTTGGCA
AGCGGTTACCGAAAAACAAATTGCAGGGGAAAAAAGGGGGCAACTGTCGA
GCCGATGACCGGCCCCAGCCGCGCACGGTATCAGGGCATGTTTTTTGGCG
CTGAGAGCCGTTCGTTCGCCACGGGTGCACAGCAGCCAACTCGCCTGCCT
TCCCCTGCTCTTTCCGTGTCTTTCTTGACAGCAATAAACTAGACATCGTA
CAAACGGATGTGGTGGACGACCCGACGCTGCAACGAAGCAAGAACGCGAT
TTGCGAGAAGTGCAATTACAACGAGGCTGTATTCTTCCAAGCAGACGAGG
TACGCCATCACCCGACCGTATCCATTGCTTGTAGGCTGTTGGCCTCCGCC
GCCTCGCCAATATTGGTTTTGTGTGATACCACGTACTAGACCTGAGCCGC
GGCTGAAAGCGAGCTTACGCTGCCCCGGCGAGGGAAATGCTGTCAGATGC
AGACACGGCGTCCGCGGCACACACATGAAGAAAGTAGAGAAGGCATGCGC
CGCTGGTAAACCAAGAGAAGGATGGAGGAGAACAACTATTAATAGATGCA
CGGGGCGTTACGGTGTCTGGCAGGGGGTGCTGCTACTATAACCTGATCCC
TTCCGAACGCGTTCCTGCATGGGTTACCAGTACCCGTCCACCAGCTCAAT
GCTATTCCCCCTCTCCCCGCTCGCCCCCCGTTAAACTGAGACCTACAACC
CCCCTGCCTTTGAGGTTCGAGGTGGGGTTGGTCGAGGTAGGATTGGCTCT
TGGAGACCTCGGCCGAAGAGTCTTGTCTCTCCCCAAAGGGGCGAAACGCA
TCACATCCTATAGGACACCTGGTGAACATTGGATAGTTGGAACACCCTAG
AGCAACCATTCGCTTGCATGAGTAGTGCCCCGCCAGGAGTACTCATGAGC
AGATTATAGTCCGAGTGTATCACACGTATACCGTCGTGTATATTGTGTTT
GTGCGGTGCTTTTGTATTAACACGGTGATCAATGTCCCTTTGCGATACTT
GGAGTATAGTCATAGTCACGCCTACTGAATGTGTAACATTTGGTTACTCG
GTATGTCCCATCAACCCATGGCATGCCGTTTGGCGTCGCAAACGCAAGGG
TGATGACCAGCAGCTGCTACAGTATCATCATCCTTCTTGTGAAAAGCAGC
CTTGTCGACGAAAACCCGGCACATCGCTCCGTCCCCGCATTGTTGGGACG
CGTGGTCTATGTCCATATGGATACGACATGCGTTTAACATAAGTACCCCC
CCCCCCCCGCGCGCTCACCCACGGTGCTTCCTTTCGATGCTGCGGGCCCT
TTTGTCGCCAATTCGCCTTTATTTCACAGGGAGCCAAGTCTCAGAGTTTG
TCTCTGATTTTCGTGTGCACGAATCGAGCGTGCGGGCACAAATGGGTCAG
CTGATCCCGCCGCGGTGAACCGGCTACTGTGAATACTGGGCGCTGGAGCC
AGGCCGACGTCGCTGTTGCCTCTCACGAGAAGGGATTGATGTCGGGCTGC
ACTTGGCGTCTTGTTAGGTTTTATTATACGTACCACCGCCTTTCCATGAC
TGCGGGGGGGGGGGGGGTTGGCAAAACTATATTTTTATCAAGATGAAC
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Coding sequence (CDS) from alignment at S-dermatodea_contig11211:2208..5455-

>mRNA_S-dermatodea_contig11211.780.1 ID=mRNA_S-dermatodea_contig11211.780.1|Name=mRNA_S-dermatodea_contig11211.780.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=714bp|location=Sequence derived from alignment at S-dermatodea_contig11211:2208..5455- (Saccorhiza dermatodea SderLu1190fm monoicous)
AATGGCGGACACTATGCGATTCTGTAGCGAGTGTGGCGGACACTATGCGA
TTCTGTAGCGAGTGCAACAACATTATGTACCCGAAAGAGAACAAAGCGGA
CCGGAAATTGATGTACGCGTGCAGCCGGTGTACCTACCAGGAGGCCGCGG
AGTCGGGGTCTTGCGTCTACAGGAATAACCTCATCACCACAGCAGGCAAC
AACATTATGTACCCGAAAGAGAACAAAGCGGACCGGAAATTGATGTACGC
GTGCAGCCGGTGTACCTACCAGGAGGCCGCGGAGTCGGGGTCTTGCGTCT
ACAGGAATAACCTCATCACCACAGCAGGCAATAAACTAGACATCGTACAA
ACGGATGTGGTGGACGACCCGACGCTGCAACGAAGCAAGAACGCGATTTG
CGAGAAGTGCAATTACAACGAGGCTGTATTCTTCCAAGCAGACGAGCAAT
AAACTAGACATCGTACAAACGGATGTGGTGGACGACCCGACGCTGCAACG
AAGCAAGAACGCGATTTGCGAGAAGTGCAATTACAACGAGGCTGTATTCT
TCCAAGCAGACGAGGGAGCCAAGTCTCAGAGTTTGTCTCTGATTTTCGTG
TGCACGAATCGAGCGTGCGGGCACAAATGGGTCAGCTGAGGAGCCAAGTC
TCAGAGTTTGTCTCTGATTTTCGTGTGCACGAATCGAGCGTGCGGGCACA
AATGGGTCAGCTGA
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