prot_S-dermatodea_contig11137.739.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11137.739.1
Unique Nameprot_S-dermatodea_contig11137.739.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length78
Homology
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BLAST of mRNA_S-dermatodea_contig11137.739.1 vs. uniprot
Match: A0A6H5LGC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGC4_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 2.240e-7
Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:    1 QACAAAGEWERALKIFAGLPSVGVQPGQLCFDAALVACAIGGQGALAVSLLEEMTSLAAEE 61
            QACAAAG+W+RAL  F+G  S G++PGQLCF             A A SLL EM +L +E+
Sbjct:  301 QACAAAGQWDRALATFSGAKSDGIEPGQLCFXXXXXXXXXXXXXARATSLLAEMATLESEQ 361
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11137.739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LGC4_9PHAE2.240e-749.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..74
e-value: 2.6E-8
score: 35.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11137contigS-dermatodea_contig11137:1785..3457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11137.739.1mRNA_S-dermatodea_contig11137.739.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11137 1785..3457 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11137.739.1 ID=prot_S-dermatodea_contig11137.739.1|Name=mRNA_S-dermatodea_contig11137.739.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=78bp
QACAAAGEWERALKIFAGLPSVGVQPGQLCFDAALVACAIGGQGALAVSL
LEEMTSLAAEEPDREWEDNAASYYGTPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf