mRNA_S-dermatodea_contig11105.725.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: D7FIS7_ECTSI (Similar to G-protein coupled receptors n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIS7_ECTSI) HSP 1 Score: 181 bits (458), Expect = 6.960e-52 Identity = 91/126 (72.22%), Postives = 106/126 (84.13%), Query Frame = 1
Query: 1 QSIFGVIQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATYGIIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMNTQRFSYSQVPVAS-KFGDEDGGDILLQSINDEEAEYGGSL 375
Q+I GVIQHL+ R QTAKL LY+ FR VL GS +F V WA YG++RSSE E ER WESYWTV+AIWE+LYLAVL+AVCFLLRPSMN+QRFSY+ +P S K GDEDGGDILLQSI+D+ AE+GGSL
Sbjct: 394 QAIVGVIQHLQVRGQTAKLALYVYFRRVLVGSAIFGVVWAVYGVVRSSEVEEERHWESYWTVDAIWEVLYLAVLVAVCFLLRPSMNSQRFSYAALPTLSGKGGDEDGGDILLQSIDDD-AEFGGSL 518
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: A0A7S2WUX5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUX5_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.930e-25 Identity = 54/127 (42.52%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 1 QSIFGVIQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATYGIIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMNTQRFSYSQVPVASKFGDEDGGDILLQSINDEEAEYGGSLGD 381
Q++ I +L AR+Q+ KL L+ +FRTVL SV+F++AWA + ++ S+ + +R W+S W+VNA+WE+LYL +L+AV L PS N+QR++YS + D D+ ++++EAEYGG+L D
Sbjct: 387 QALMQTIAYLDARKQSVKLQLFRRFRTVLIISVLFSIAWAIFTVVASAPKYFKRHWQSAWSVNAVWEVLYLIILVAVAVLFMPSKNSQRYAYSL-----ELATVDPDDMEEDELDEDEAEYGGALDD 508
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: A0A7S2AS73_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AS73_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 9.290e-21 Identity = 42/93 (45.16%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 1 QSIFGVIQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATYGIIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMNTQRFSYS 279
Q++ I++L +R+Q+ KL L+ +FRTVL SV+ ++A+A Y ++ S+E E W S W +NA+WE+LYL +L+A+C L PS N+QR++YS
Sbjct: 341 QAMLSTIRYLESRKQSVKLQLFRRFRTVLILSVLVSMAYAVYTMVASTESWFEEHWTSQWCINAVWEVLYLLILMAICILWMPSSNSQRYAYS 433
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: A0A7S2XZ88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ88_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.330e-19 Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 1
Query: 1 QSIFGVIQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATYGIIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMNTQRFSYS 279
Q++ I L+ R+Q K L+ +FR VL SV+F+VAW+ + I+ S+ ER W+ WTV AIWE+LYL +L+A+C L RPS+N QR++YS
Sbjct: 383 QALTRTIFLLKTRKQWIKYMLFERFRLVLIISVLFSVAWSIFSIVMSTGSRLERDWQEAWTVPAIWEVLYLLILVAICVLWRPSINNQRYAYS 475
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: A0A836CI84_9STRA (Lung seven transmembrane receptor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI84_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 8.140e-16 Identity = 49/125 (39.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 4 SIFGVIQHLR--ARRQTAKLTLYLQFRTVLGGSVVFAVAWATYGIIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMN-TQRFSYSQVPVASKFGDEDGGDILLQSINDEEAEYGG 369
S+ V+ HL+ AR + +LY +F VL VF+ AWA +G+++++ + + WE W V A+WE+LYL +L+AVC LLRP M+ F YS V +A + ++ L +DEE EYGG
Sbjct: 390 SLSWVLAHLKTKARPRPELTSLYRRFVGVLIVGGVFSFAWAIFGVVQTTGDRRDVHWELDWAVVAVWEVLYLYLLIAVCVLLRPRMDGATSFGYSAVEMAERDTNQ------LMGDHDEELEYGG 508
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: A0A2R5G6Y7_9STRA (Transmembrane protein 87A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6Y7_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.560e-13 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 1
Query: 4 SIFGVIQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATYGIIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMNTQRFSYSQV 285
S+ +I+ L ARRQ KL LY+ FR +L +VV AW+ + + W+ ++ + A W++LY AVLLA+ +L PS ++QR++Y +V
Sbjct: 367 SLAVIIKSLGARRQETKLDLYVSFRRILVAAVVVGCAWSVFFAYCIRTNYVDLHWQDFYKLEAFWDVLYFAVLLAIIYLWAPSASSQRYAYDKV 460
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: A0A7S4FCR9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCR9_CHRCT) HSP 1 Score: 70.9 bits (172), Expect = 2.270e-13 Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 19 IQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATY--GIIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMNTQRFSY 276
+ L RRQTAKLTLY +F ++L S+ + W ++ G+I S ++ RW S W +A W +LY +LLA+C+L PS + +++Y
Sbjct: 6 LAQLSTRRQTAKLTLYRRFSSILLASICISGLWVSWQMGVIVSGSLDS--RWTSLWMFDAFWHVLYFGILLAICYLWSPSKSNLQYAY 91
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: A0A7S4KJM4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4KJM4_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 2.870e-13 Identity = 31/86 (36.05%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 19 IQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATYGIIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMNTQRFSY 276
+ L RRQ+AKL LY +F VL S+ + W + ++ + + RW S W +A+W +LY A+LLA+C+L P+ N +++Y
Sbjct: 24 LAQLSTRRQSAKLLLYRRFSYVLITSIGVSALWVCWQMVAIVIDNLDERWASLWIFDAVWHLLYFAILLAICYLWSPNKNNLQYAY 109
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: A0A7S0GMJ3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GMJ3_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 9.860e-13 Identity = 35/91 (38.46%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 4 SIFGVIQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATYGIIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMNTQRFSY 276
S+ +Q+L + Q KL YL+ R VL S++FA+AWA +GI+ + EE +S WT++ +WE+ YL VL++V L RP+ + + ++Y
Sbjct: 312 SLNSTMQYLESMNQNMKLLRYLRLRLVLLISILFAIAWAVFGIVDNLMEEGMLPLQSAWTLSGVWELNYLFVLISVAVLWRPNESAKNYAY 402
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Match: A0A482SEC8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEC8_9ARCH) HSP 1 Score: 71.6 bits (174), Expect = 3.440e-12 Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 4 SIFGVIQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATYG--IIRSSEEETERRWESYWTVNAIWEILYLAVLLAVCFLLRPSMNTQRFSYS 279
SI ++ L +R+Q K LY FR VL ++ WA YG + + T + W WTV+A+WE++Y + +A+ L PS N+QR++YS
Sbjct: 184 SINNLMVSLASRKQGVKYLLYRNFRGVLITLLILTCLWALYGSALFLNDSNGTNKNWREKWTVDALWEVIYFLIFVAIAVLWAPSNNSQRYAYS 277 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11105.725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11105.725.1 >prot_S-dermatodea_contig11105.725.1 ID=prot_S-dermatodea_contig11105.725.1|Name=mRNA_S-dermatodea_contig11105.725.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=127bp QSIFGVIQHLRARRQTAKLTLYLQFRTVLGGSVVFAVAWATYGIIRSSEEback to top mRNA from alignment at S-dermatodea_contig11105:5013..7706- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11105.725.1 ID=mRNA_S-dermatodea_contig11105.725.1|Name=mRNA_S-dermatodea_contig11105.725.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2694bp|location=Sequence derived from alignment at S-dermatodea_contig11105:5013..7706- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11105:5013..7706- >mRNA_S-dermatodea_contig11105.725.1 ID=mRNA_S-dermatodea_contig11105.725.1|Name=mRNA_S-dermatodea_contig11105.725.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at S-dermatodea_contig11105:5013..7706- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |