mRNA_S-dermatodea_contig11100.723.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI) HSP 1 Score: 382 bits (982), Expect = 1.760e-124 Identity = 201/275 (73.09%), Postives = 234/275 (85.09%), Query Frame = 1
Query: 49 VVYVSEGANTALLDNLADAASTTTKG-AGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLG-QGAQQTAREAGMAIARALGAE-GLPVLLYGDLKKGRGLAEVRRSTPYFSNGKLPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAVSRFLGER 864
VVYVSEG N+ LLD LA+AA TT G AGL+RQFRD YHRTG+TIGG+CP +VA AS+EVSRRA+RAIDL H+A+HPRIGVVDHVSVHPLG +G+Q+ A++AG+AIA ALG + GLPVLLYGDL GR LAEVRRSTPYF G+LP I ADLGPNEVD SRG+ TVGCTPLVTNYNILL TDDKR+A++VTRS+REKDGGL WVESLTL+R+DG++EAACNLLRPKETT A VL VAE +AA +GI VV YETGLT+E+A+AA+SR ER
Sbjct: 38 VVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEAAHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAAISRLSSER 312
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A4D9D4Y2_9STRA (FTCD_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y2_9STRA) HSP 1 Score: 202 bits (515), Expect = 5.480e-56 Identity = 121/274 (44.16%), Postives = 165/274 (60.22%), Query Frame = 1
Query: 52 VYVSEGANTALLDNLADAASTTTKG-AGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMH-KASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAEG-LPVLLYGDLKKGRGLAEVRRSTPYFSNGKLPEKIG-ADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAVSRFLGE 861
VYVSEG N ALLD L A T++ G L+++F D YHR+ +T+GG+ P V E ++ V A +D+ H A+HPR+GVVDHVS HPLG + AR+A A+ + +G + +PVLLYG + LA+VRRST YF ++ AD GP +VDP G++ G P V N+NI L T +K++AA VT++VR +DGG VE+LTL E G E ACNLL T A VL +A A G+EV +AY G+T ++ +A L E
Sbjct: 19 VYVSEGRNHALLDRLTHLARTSSPGLCALVQRFSDAVYHRSNFTLGGA-PEPVVEVALRVINEAFLHVDMTKHVDATHPRVGVVDHVSFHPLGNTPLEVARKAACALGQRVGGKWPVPVLLYGSCNN-KSLADVRRSTSYFKKMAFDAQVPHADYGPVDVDPRLGLLCCGAVPYVQNFNIRLKTSEKQIAAMVTKAVRSRDGGPVGVEALTLRHEGGHMEVACNLLDVDTTDTARVLKLATDAARKAGVEVEEAYTVGMTGDEILAETKHVLLE 290
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A8J9WP56_9CHLO (Probable formimidoyltransferase-cyclodeaminase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP56_9CHLO) HSP 1 Score: 201 bits (512), Expect = 1.850e-55 Identity = 123/284 (43.31%), Postives = 163/284 (57.39%), Query Frame = 1
Query: 52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQ-QTAREAGMAIARALGAEG---LPVLLYGDLKKGR-GLAEVRRSTPYFSNGK-----------LPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAVSRFL 855
VY+SEG+ ALL+ L AST T G L+ F D Y+RTG+T+ P +A ++ ++R AL AIDLR+H ASHPR+GVVDH+S HPLG GA +A EA I LG EG +PV LYG K + LA++RR+ YF K +P + D GP +DPSRG+ TVG P V NYN+LL TDD +++ Q+ R+V + GGL VE++ L E G E ACNLL ++P V ++ A GI V AY TG T E+ + L
Sbjct: 15 VYISEGSKLALLEQLKGVASTDT-GTALVHTFIDKPYNRTGFTLASPGPQQLARTAVHLARAALAAIDLRLHSASHPRLGVVDHISCHPLGTGATLSSATEAARLIGAQLG-EGELAVPVFLYGSAHKNQQSLADIRRACGYFKGSKQGAFHGASGIIIPPGLQPDYGPEHLDPSRGLATVGAVPFVVNYNVLLKTDDMQLSRQIARAVSSRGGGLPSVEAMALPHE-GGVEIACNLLDAATSSPEAVGAAVQQHALKHGIVVGDAYMTGRTPEELCTLAEQIL 295
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK) HSP 1 Score: 188 bits (478), Expect = 3.410e-50 Identity = 121/280 (43.21%), Postives = 158/280 (56.43%), Query Frame = 1
Query: 40 ILSVVYVSEGANTALLDNLADAASTTTK---GAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAE-GLPVLLYGDLKKGRGLAEVRRSTPYFSNGKLPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLG-IEVVKAYETGLTEEQAVAAVSRFLGER 864
I S +YVSEG + ++ L + A T L+ +F D Y+RT + G SSV+ EV+ A+ +++L H+ASHPRIGVVDH+SVHPLG+ A EA I G E G+P+L YG L G+ L+ VRRST YF G+ E + ADLGP VDP RG + VG P V NYN+ D++ + R++REKDGGL VE++ L G+YEAACNLL P VL A AA G IEV AY GLT + ++R L R
Sbjct: 53 IFSNLYVSEGRDEQFINELHEMAHNKTGETFDCALVNKFSDPHYNRTSFCFAGHY-SSVSRIIKEVAEVAIESLNLEEHEASHPRIGVVDHISVHPLGE-TMVFAEEAAREIGAYFGTEKGIPILFYGSLN-GKRLSAVRRSTSYFRGGQDRE-VAADLGPRAVDPRRGAMCVGAVPPVLNYNVRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHAGGNYEAACNLLEADRVGPEEVLAAATAAAAAQGGIEVDAAYTIGLTAAEVADRLARALAGR 328
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: I0YZZ2_COCSC (Formiminotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZZ2_COCSC) HSP 1 Score: 186 bits (472), Expect = 8.660e-50 Identity = 120/294 (40.82%), Postives = 163/294 (55.44%), Query Frame = 1
Query: 52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAR-EAGMAIARALGAEG---LPVLLYGDL-KKGRGLAEVRRSTPYFSNGK-----------LPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSY---EAACNLL----RPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAVSRFLGER 864
VY+SEG + L+ L A G+ L+ F D Y+RTG+T+ P +A + + ++R AL IDLR H ASHPR+GVVDH+S HPLG+ A TA E +I LG EG +PV LYG + R LA++RR+ YF K +P + D GP+E+DP RG+ TVG P V N+NILL TDD ++A Q+ R+V + GGL VE++ L E+G E ACNLL P E A V + A+R GI V + Y TG T E+ + + L +R
Sbjct: 10 VYISEGLRSTLVQQLKVCADKCISGSALVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHAASHPRLGVVDHISCHPLGRDAALTAAAETARSIGTQLG-EGELAVPVFLYGSAGSQQRSLADLRRACGYFKGSKQGAFKGASEISMPAGMRPDFGPSELDPRRGLATVGALPWVVNFNILLQTDDLQLARQIARAVSGRGGGLPSVEAMALPHEEGEILGIEIACNLLDVAVSPTEAVAASVQEHADRH----GITVGRGYMTGKTPEELCSLAEQALADR 298
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A061R7T0_9CHLO (Formimidoyltransferase-cyclodeaminase-like isoform x1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7T0_9CHLO) HSP 1 Score: 167 bits (424), Expect = 1.410e-43 Identity = 107/262 (40.84%), Postives = 143/262 (54.58%), Query Frame = 1
Query: 52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGA------EGLPVLLYGDLK-KGRGLAEVRRSTPYFSNGKLPEKIGA---------DLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIE 789
VY SEG N LL L S G L+ +F DT Y+R+ +T+ + A A+ E+++ A+ A+DLR H+ASHPR+GVVDH+S HPL A A E A+AR++G+ PV LYG +GR LA++RRS YF GA DLGP V P G+V VG + +TNYNILL T D ++ R V E+ GGL V+++ L +G+ E ACNLL + T P VL+ AA GIE
Sbjct: 2 VYXSEGXNVKLLKTLEQLVSGR-NGVALVNKFTDTPYNRSSFTLASAGVGEAAVAAAELAKAAICALDLRTHEASHPRLGVVDHISCHPLTAAA---AMEDAAALARSIGSIVXAEPTPAPVFLYGAAHPEGRRLADLRRSFGYFEGSAXSSWSGAIDDRHLLTPDLGPVXVSPRTGIVAVGASKWITNYNILLNTADLVTGRKIAREVSERGGGLPHVQAMALRHAEGAVEVACNLLDHEATPPPAVLERVRSLAAAHGIE 259
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A8HWL3_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWL3_CHLRE) HSP 1 Score: 159 bits (403), Expect = 1.520e-40 Identity = 103/268 (38.43%), Postives = 141/268 (52.61%), Query Frame = 1
Query: 52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREA-GMAIARALGAE----GLPVLLYGDLKKGR-GLAEVRRSTPYFSNG------------KLP-----EKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGI 786
VY+SEG + AL+ L +AA+ T G L+ F+D YHRTG+T+ P + EA + +SR AL+ +DLR H ASHPR+GVVDH+++HPLG A A + G+A A G E LPV YG R GLA++RR YF +LP DLGP G+VT+G TP V NYN+ L D A ++ +++ E+ GGL V+++ L+ DG E ACNLL P + E A G+
Sbjct: 3 VYISEGRDKALIGKL-EAAAQATPGVALVNVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAATHSRGVATTVAGGQEEEVPALPVYFYGHAHPSRRGLADIRRKLGYFRRSPEGGWRGGLEQQQLPAGNDLSAFPPDLGPATASARWGVVTIGATPWVGNYNVPLSGVDMATARKLAKAISERGGGLPGVQAMALQHADGLVEVACNLLDAAAAPPGTLQARLEGIAGAWGL 269
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A7S0PKG3_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PKG3_9CHLO) HSP 1 Score: 159 bits (402), Expect = 6.630e-40 Identity = 117/309 (37.86%), Postives = 159/309 (51.46%), Query Frame = 1
Query: 25 ALRNAILSVVYVSEGANTALLDNLADAA--STTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAEGLPVLLYGDLKK-GRGLAEVRRSTPYFSN-------GKLPEKIGA--DLGPNEVDPSRGMVTVGCTPLVTNYNI-LLGTDDKRVAAQ------------VTRSVREKDGGLRWVESLTLEREDGSYEAACNLL-----------RPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAV 843
A R A+ +VVYVSEG N +LD + A ++TT+ L+ FRD Y+RTG+T G + V +++EV+ +LR +DLR H A+HPR+GVVDHVS H L G + A E I LG+ G+PV LYGD G GL E+RR + YFS G+ + G D GP+ V G+ VG P V NYN+ L+ T + A+ V + V ++ GGL+ V+S+ L D E ACNLL R E A + DV E L G+ V + Y T T E AA+
Sbjct: 4 AARAALAAVVYVSEGRNAVVLDKIEAIARKASTTRPVALVNIFRDVEYNRTGFTFAGRDANDVTRSALEVASASLRVVDLREHAATHPRVGVVDHVSCHALDAGRRADAAELAREIGAGLGSFGVPVKLYGDAASDGVGLDEIRRRSGYFSGAASGTWRGEFVAERGFAFDYGPDVVPEREGLAMVGAVPWVCNYNVPLVFTFGVSMDAEQRLKRAMSFGRAVAKRVSQRGGGLQSVQSMALPHGD-KVEVACNLLDVHVSSTEDVQRATENIVATI-DVREFLGELGGVRVERGYVTNQTPESISAAI 310
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A804P0U8_MAIZE (Uncharacterized protein n=14 Tax=Zea mays TaxID=4577 RepID=A0A804P0U8_MAIZE) HSP 1 Score: 154 bits (389), Expect = 2.890e-38 Identity = 103/281 (36.65%), Postives = 141/281 (50.18%), Query Frame = 1
Query: 52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTI-----GGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAE-GLPVLLYGDLKK-GRGLAEVRRSTPYFS-------------NGKLPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAV 834
+Y+SE N+ L + AA+ A L+ F D Y+R GYT+ GG + AS V A+ A+DL H +HPR+GVVDHV+ HPL + A+A +G +P LYG + GR LA +RR YF+ + LP + D GP S G+V VG TP V NYN+ L T D VA ++ R+V E+ GGL V+++ L DG+ E ACNLL P V + R AA LG+ V + Y T L+ E+ V
Sbjct: 12 LYISEARNSGALRAIEHAAAALRPLAVLVNTFADDAYNRVGYTLVSPLAGGGASPPLRCASFRVVAAAIEAVDLDAHAGAHPRLGVVDHVAFHPLASAHLEDVTALARAVAADIGDRLQVPTYLYGAAHRDGRTLASIRRQLGYFTPTSPGGEQWHGAPDSLLP--VAPDAGPRTSSASNGVVVVGATPWVDNYNVPLTTADVSVARRIARAVSERGGGLACVQAMGLAHGDGATEVACNLLHPDAVGADQVQERVSRLAAGLGVGVGQGYFTDLSREKVV 290
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A8J5STH4_ZIZPA (FTCD_N domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5STH4_ZIZPA) HSP 1 Score: 155 bits (392), Expect = 2.390e-37 Identity = 101/279 (36.20%), Postives = 142/279 (50.90%), Query Frame = 1
Query: 52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGS---CPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAE-GLPVLLYGDL-KKGRGLAEVRRSTPYFS-------------NGKLPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAV 834
+Y+SE N + L + AAS GA ++ +F D Y+R GYT+ P + A V R AL AID R H +HPR+G VDH+ HPL QG+ A+A +G + +P LYG ++GR LA +RR YF G LP + D GP S+G+V VG T V NYN+ + T D A ++ R+V E+ GGL+ V+++ L DG E ACNLL P + V D+ ER A G+ K Y T ++++ V
Sbjct: 37 IYISESRNASALRTIERAAS----GAVIVNRFTDDAYNRVGYTLVAPLLPAPPPLRYAVFGVVRAALEAIDFRAHAGTHPRLGAVDHICFHPLAQGSLHHVAALAGAVAADIGDKLQVPTFLYGAAHREGRTLASIRRQLGYFKPNSSGDQWRGAPEEGNLP--VTPDAGPERSPRSKGVVVVGATDWVDNYNVPVYTSDVDAARRIARAVSERGGGLQSVQAMGLAHSDGVVEVACNLLDPAKAGADQVQDMVERLAGADGLSAGKGYFTDFSQDKIV 309 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11100.723.1 >prot_S-dermatodea_contig11100.723.1 ID=prot_S-dermatodea_contig11100.723.1|Name=mRNA_S-dermatodea_contig11100.723.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=203bp MHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAEGLPVLLYGback to top mRNA from alignment at S-dermatodea_contig11100:4315..7753+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11100.723.1 ID=mRNA_S-dermatodea_contig11100.723.1|Name=mRNA_S-dermatodea_contig11100.723.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3439bp|location=Sequence derived from alignment at S-dermatodea_contig11100:4315..7753+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11100:4315..7753+ >mRNA_S-dermatodea_contig11100.723.1 ID=mRNA_S-dermatodea_contig11100.723.1|Name=mRNA_S-dermatodea_contig11100.723.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at S-dermatodea_contig11100:4315..7753+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |