mRNA_S-dermatodea_contig11100.723.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11100.723.1
Unique NamemRNA_S-dermatodea_contig11100.723.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 1.760e-124
Identity = 201/275 (73.09%), Postives = 234/275 (85.09%), Query Frame = 1
Query:   49 VVYVSEGANTALLDNLADAASTTTKG-AGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLG-QGAQQTAREAGMAIARALGAE-GLPVLLYGDLKKGRGLAEVRRSTPYFSNGKLPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAVSRFLGER 864
            VVYVSEG N+ LLD LA+AA TT  G AGL+RQFRD  YHRTG+TIGG+CP +VA AS+EVSRRA+RAIDL  H+A+HPRIGVVDHVSVHPLG +G+Q+ A++AG+AIA ALG + GLPVLLYGDL  GR LAEVRRSTPYF  G+LP  I ADLGPNEVD SRG+ TVGCTPLVTNYNILL TDDKR+A++VTRS+REKDGGL WVESLTL+R+DG++EAACNLLRPKETT A VL VAE +AA +GI VV  YETGLT+E+A+AA+SR   ER
Sbjct:   38 VVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEAAHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAAISRLSSER 312          
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A4D9D4Y2_9STRA (FTCD_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y2_9STRA)

HSP 1 Score: 202 bits (515), Expect = 5.480e-56
Identity = 121/274 (44.16%), Postives = 165/274 (60.22%), Query Frame = 1
Query:   52 VYVSEGANTALLDNLADAASTTTKG-AGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMH-KASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAEG-LPVLLYGDLKKGRGLAEVRRSTPYFSNGKLPEKIG-ADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAVSRFLGE 861
            VYVSEG N ALLD L   A T++ G   L+++F D  YHR+ +T+GG+ P  V E ++ V   A   +D+  H  A+HPR+GVVDHVS HPLG    + AR+A  A+ + +G +  +PVLLYG     + LA+VRRST YF       ++  AD GP +VDP  G++  G  P V N+NI L T +K++AA VT++VR +DGG   VE+LTL  E G  E ACNLL    T  A VL +A   A   G+EV +AY  G+T ++ +A     L E
Sbjct:   19 VYVSEGRNHALLDRLTHLARTSSPGLCALVQRFSDAVYHRSNFTLGGA-PEPVVEVALRVINEAFLHVDMTKHVDATHPRVGVVDHVSFHPLGNTPLEVARKAACALGQRVGGKWPVPVLLYGSCNN-KSLADVRRSTSYFKKMAFDAQVPHADYGPVDVDPRLGLLCCGAVPYVQNFNIRLKTSEKQIAAMVTKAVRSRDGGPVGVEALTLRHEGGHMEVACNLLDVDTTDTARVLKLATDAARKAGVEVEEAYTVGMTGDEILAETKHVLLE 290          
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A8J9WP56_9CHLO (Probable formimidoyltransferase-cyclodeaminase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP56_9CHLO)

HSP 1 Score: 201 bits (512), Expect = 1.850e-55
Identity = 123/284 (43.31%), Postives = 163/284 (57.39%), Query Frame = 1
Query:   52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQ-QTAREAGMAIARALGAEG---LPVLLYGDLKKGR-GLAEVRRSTPYFSNGK-----------LPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAVSRFL 855
            VY+SEG+  ALL+ L   AST T G  L+  F D  Y+RTG+T+    P  +A  ++ ++R AL AIDLR+H ASHPR+GVVDH+S HPLG GA   +A EA   I   LG EG   +PV LYG   K +  LA++RR+  YF   K           +P  +  D GP  +DPSRG+ TVG  P V NYN+LL TDD +++ Q+ R+V  + GGL  VE++ L  E G  E ACNLL    ++P  V    ++ A   GI V  AY TG T E+      + L
Sbjct:   15 VYISEGSKLALLEQLKGVASTDT-GTALVHTFIDKPYNRTGFTLASPGPQQLARTAVHLARAALAAIDLRLHSASHPRLGVVDHISCHPLGTGATLSSATEAARLIGAQLG-EGELAVPVFLYGSAHKNQQSLADIRRACGYFKGSKQGAFHGASGIIIPPGLQPDYGPEHLDPSRGLATVGAVPFVVNYNVLLKTDDMQLSRQIARAVSSRGGGLPSVEAMALPHE-GGVEIACNLLDAATSSPEAVGAAVQQHALKHGIVVGDAYMTGRTPEELCTLAEQIL 295          
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK)

HSP 1 Score: 188 bits (478), Expect = 3.410e-50
Identity = 121/280 (43.21%), Postives = 158/280 (56.43%), Query Frame = 1
Query:   40 ILSVVYVSEGANTALLDNLADAASTTTK---GAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAE-GLPVLLYGDLKKGRGLAEVRRSTPYFSNGKLPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLG-IEVVKAYETGLTEEQAVAAVSRFLGER 864
            I S +YVSEG +   ++ L + A   T       L+ +F D  Y+RT +   G   SSV+    EV+  A+ +++L  H+ASHPRIGVVDH+SVHPLG+     A EA   I    G E G+P+L YG L  G+ L+ VRRST YF  G+  E + ADLGP  VDP RG + VG  P V NYN+     D++    + R++REKDGGL  VE++ L    G+YEAACNLL      P  VL  A   AA  G IEV  AY  GLT  +    ++R L  R
Sbjct:   53 IFSNLYVSEGRDEQFINELHEMAHNKTGETFDCALVNKFSDPHYNRTSFCFAGHY-SSVSRIIKEVAEVAIESLNLEEHEASHPRIGVVDHISVHPLGE-TMVFAEEAAREIGAYFGTEKGIPILFYGSLN-GKRLSAVRRSTSYFRGGQDRE-VAADLGPRAVDPRRGAMCVGAVPPVLNYNVRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHAGGNYEAACNLLEADRVGPEEVLAAATAAAAAQGGIEVDAAYTIGLTAAEVADRLARALAGR 328          
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: I0YZZ2_COCSC (Formiminotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZZ2_COCSC)

HSP 1 Score: 186 bits (472), Expect = 8.660e-50
Identity = 120/294 (40.82%), Postives = 163/294 (55.44%), Query Frame = 1
Query:   52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAR-EAGMAIARALGAEG---LPVLLYGDL-KKGRGLAEVRRSTPYFSNGK-----------LPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSY---EAACNLL----RPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAVSRFLGER 864
            VY+SEG  + L+  L   A     G+ L+  F D  Y+RTG+T+    P  +A + + ++R AL  IDLR H ASHPR+GVVDH+S HPLG+ A  TA  E   +I   LG EG   +PV LYG    + R LA++RR+  YF   K           +P  +  D GP+E+DP RG+ TVG  P V N+NILL TDD ++A Q+ R+V  + GGL  VE++ L  E+G     E ACNLL     P E   A V + A+R     GI V + Y TG T E+  +   + L +R
Sbjct:   10 VYISEGLRSTLVQQLKVCADKCISGSALVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHAASHPRLGVVDHISCHPLGRDAALTAAAETARSIGTQLG-EGELAVPVFLYGSAGSQQRSLADLRRACGYFKGSKQGAFKGASEISMPAGMRPDFGPSELDPRRGLATVGALPWVVNFNILLQTDDLQLARQIARAVSGRGGGLPSVEAMALPHEEGEILGIEIACNLLDVAVSPTEAVAASVQEHADRH----GITVGRGYMTGKTPEELCSLAEQALADR 298          
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A061R7T0_9CHLO (Formimidoyltransferase-cyclodeaminase-like isoform x1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7T0_9CHLO)

HSP 1 Score: 167 bits (424), Expect = 1.410e-43
Identity = 107/262 (40.84%), Postives = 143/262 (54.58%), Query Frame = 1
Query:   52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGA------EGLPVLLYGDLK-KGRGLAEVRRSTPYFSNGKLPEKIGA---------DLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIE 789
            VY SEG N  LL  L    S    G  L+ +F DT Y+R+ +T+  +     A A+ E+++ A+ A+DLR H+ASHPR+GVVDH+S HPL   A   A E   A+AR++G+         PV LYG    +GR LA++RRS  YF         GA         DLGP  V P  G+V VG +  +TNYNILL T D     ++ R V E+ GGL  V+++ L   +G+ E ACNLL  + T P  VL+     AA  GIE
Sbjct:    2 VYXSEGXNVKLLKTLEQLVSGR-NGVALVNKFTDTPYNRSSFTLASAGVGEAAVAAAELAKAAICALDLRTHEASHPRLGVVDHISCHPLTAAA---AMEDAAALARSIGSIVXAEPTPAPVFLYGAAHPEGRRLADLRRSFGYFEGSAXSSWSGAIDDRHLLTPDLGPVXVSPRTGIVAVGASKWITNYNILLNTADLVTGRKIAREVSERGGGLPHVQAMALRHAEGAVEVACNLLDHEATPPPAVLERVRSLAAAHGIE 259          
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A8HWL3_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWL3_CHLRE)

HSP 1 Score: 159 bits (403), Expect = 1.520e-40
Identity = 103/268 (38.43%), Postives = 141/268 (52.61%), Query Frame = 1
Query:   52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREA-GMAIARALGAE----GLPVLLYGDLKKGR-GLAEVRRSTPYFSNG------------KLP-----EKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGI 786
            VY+SEG + AL+  L +AA+  T G  L+  F+D  YHRTG+T+    P  + EA + +SR AL+ +DLR H ASHPR+GVVDH+++HPLG  A   A  + G+A   A G E     LPV  YG     R GLA++RR   YF               +LP          DLGP       G+VT+G TP V NYN+ L   D   A ++ +++ E+ GGL  V+++ L+  DG  E ACNLL      P  +    E  A   G+
Sbjct:    3 VYISEGRDKALIGKL-EAAAQATPGVALVNVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAATHSRGVATTVAGGQEEEVPALPVYFYGHAHPSRRGLADIRRKLGYFRRSPEGGWRGGLEQQQLPAGNDLSAFPPDLGPATASARWGVVTIGATPWVGNYNVPLSGVDMATARKLAKAISERGGGLPGVQAMALQHADGLVEVACNLLDAAAAPPGTLQARLEGIAGAWGL 269          
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A7S0PKG3_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PKG3_9CHLO)

HSP 1 Score: 159 bits (402), Expect = 6.630e-40
Identity = 117/309 (37.86%), Postives = 159/309 (51.46%), Query Frame = 1
Query:   25 ALRNAILSVVYVSEGANTALLDNLADAA--STTTKGAGLLRQFRDTTYHRTGYTIGGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAEGLPVLLYGDLKK-GRGLAEVRRSTPYFSN-------GKLPEKIGA--DLGPNEVDPSRGMVTVGCTPLVTNYNI-LLGTDDKRVAAQ------------VTRSVREKDGGLRWVESLTLEREDGSYEAACNLL-----------RPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAV 843
            A R A+ +VVYVSEG N  +LD +   A  ++TT+   L+  FRD  Y+RTG+T  G   + V  +++EV+  +LR +DLR H A+HPR+GVVDHVS H L  G +  A E    I   LG+ G+PV LYGD    G GL E+RR + YFS        G+   + G   D GP+ V    G+  VG  P V NYN+ L+ T    + A+            V + V ++ GGL+ V+S+ L   D   E ACNLL           R  E   A + DV E    L G+ V + Y T  T E   AA+
Sbjct:    4 AARAALAAVVYVSEGRNAVVLDKIEAIARKASTTRPVALVNIFRDVEYNRTGFTFAGRDANDVTRSALEVASASLRVVDLREHAATHPRVGVVDHVSCHALDAGRRADAAELAREIGAGLGSFGVPVKLYGDAASDGVGLDEIRRRSGYFSGAASGTWRGEFVAERGFAFDYGPDVVPEREGLAMVGAVPWVCNYNVPLVFTFGVSMDAEQRLKRAMSFGRAVAKRVSQRGGGLQSVQSMALPHGD-KVEVACNLLDVHVSSTEDVQRATENIVATI-DVREFLGELGGVRVERGYVTNQTPESISAAI 310          
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A804P0U8_MAIZE (Uncharacterized protein n=14 Tax=Zea mays TaxID=4577 RepID=A0A804P0U8_MAIZE)

HSP 1 Score: 154 bits (389), Expect = 2.890e-38
Identity = 103/281 (36.65%), Postives = 141/281 (50.18%), Query Frame = 1
Query:   52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTI-----GGSCPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAE-GLPVLLYGDLKK-GRGLAEVRRSTPYFS-------------NGKLPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAV 834
            +Y+SE  N+  L  +  AA+     A L+  F D  Y+R GYT+     GG     +  AS  V   A+ A+DL  H  +HPR+GVVDHV+ HPL     +       A+A  +G    +P  LYG   + GR LA +RR   YF+             +  LP  +  D GP     S G+V VG TP V NYN+ L T D  VA ++ R+V E+ GGL  V+++ L   DG+ E ACNLL P       V +   R AA LG+ V + Y T L+ E+ V
Sbjct:   12 LYISEARNSGALRAIEHAAAALRPLAVLVNTFADDAYNRVGYTLVSPLAGGGASPPLRCASFRVVAAAIEAVDLDAHAGAHPRLGVVDHVAFHPLASAHLEDVTALARAVAADIGDRLQVPTYLYGAAHRDGRTLASIRRQLGYFTPTSPGGEQWHGAPDSLLP--VAPDAGPRTSSASNGVVVVGATPWVDNYNVPLTTADVSVARRIARAVSERGGGLACVQAMGLAHGDGATEVACNLLHPDAVGADQVQERVSRLAAGLGVGVGQGYFTDLSREKVV 290          
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Match: A0A8J5STH4_ZIZPA (FTCD_N domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5STH4_ZIZPA)

HSP 1 Score: 155 bits (392), Expect = 2.390e-37
Identity = 101/279 (36.20%), Postives = 142/279 (50.90%), Query Frame = 1
Query:   52 VYVSEGANTALLDNLADAASTTTKGAGLLRQFRDTTYHRTGYTIGGS---CPSSVAEASIEVSRRALRAIDLRMHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAE-GLPVLLYGDL-KKGRGLAEVRRSTPYFS-------------NGKLPEKIGADLGPNEVDPSRGMVTVGCTPLVTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACNLLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAV 834
            +Y+SE  N + L  +  AAS    GA ++ +F D  Y+R GYT+       P  +  A   V R AL AID R H  +HPR+G VDH+  HPL QG+         A+A  +G +  +P  LYG   ++GR LA +RR   YF               G LP  +  D GP     S+G+V VG T  V NYN+ + T D   A ++ R+V E+ GGL+ V+++ L   DG  E ACNLL P +     V D+ ER A   G+   K Y T  ++++ V
Sbjct:   37 IYISESRNASALRTIERAAS----GAVIVNRFTDDAYNRVGYTLVAPLLPAPPPLRYAVFGVVRAALEAIDFRAHAGTHPRLGAVDHICFHPLAQGSLHHVAALAGAVAADIGDKLQVPTFLYGAAHREGRTLASIRRQLGYFKPNSSGDQWRGAPEEGNLP--VTPDAGPERSPRSKGVVVVGATDWVDNYNVPVYTSDVDAARRIARAVSERGGGLQSVQAMGLAHSDGVVEVACNLLDPAKAGADQVQDMVERLAGADGLSAGKGYFTDFSQDKIV 309          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11100.723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA3_ECTSI1.760e-12473.09FTCD_N domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A4D9D4Y2_9STRA5.480e-5644.16FTCD_N domain-containing protein n=1 Tax=Nannochlo... [more]
A0A8J9WP56_9CHLO1.850e-5543.31Probable formimidoyltransferase-cyclodeaminase n=1... [more]
A0A7S3XW83_HETAK3.410e-5043.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
I0YZZ2_COCSC8.660e-5040.82Formiminotransferase n=1 Tax=Coccomyxa subellipsoi... [more]
A0A061R7T0_9CHLO1.410e-4340.84Formimidoyltransferase-cyclodeaminase-like isoform... [more]
A8HWL3_CHLRE1.520e-4038.43Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A0A7S0PKG3_9CHLO6.630e-4037.86Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A804P0U8_MAIZE2.890e-3836.65Uncharacterized protein n=14 Tax=Zea mays TaxID=45... [more]
A0A8J5STH4_ZIZPA2.390e-3736.20FTCD_N domain-containing protein n=1 Tax=Zizania p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11100contigS-dermatodea_contig11100:4315..7753 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.8
Seed ortholog evalue4.9e-76
Seed eggNOG ortholog2880.D8LBA3
Preferred nameFTCDNL1
GOsGO:0000139,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005790,GO:0005793,GO:0005794,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0006996,GO:0007010,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0012505,GO:0015631,GO:0016020,GO:0016043,GO:0016054,GO:0016740,GO:0016741,GO:0016742,GO:0016829,GO:0016840,GO:0016841,GO:0019439,GO:0019752,GO:0030407,GO:0030409,GO:0030412,GO:0030868,GO:0031090,GO:0031984,GO:0034641,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:0071840,GO:0071944,GO:0097425,GO:0098588,GO:0098791,GO:0098827,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606
EggNOG free text desc.formimidoyltetrahydrofolate cyclodeaminase activity
EggNOG OGs2QS19@2759,COG3404@1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionFormiminotransferase, N-terminal subdomain
Ec32 orthologEc-27_004640.1
Exons4
Model size2184
Cds size609
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11100.723.1prot_S-dermatodea_contig11100.723.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11100 4576..6439 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924187.6238918-UTR-S-dermatodea_contig11100:4314..45751622924187.6238918-UTR-S-dermatodea_contig11100:4314..4575Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11100 4315..4575 +
1694079078.2791545-UTR-S-dermatodea_contig11100:4314..45751694079078.2791545-UTR-S-dermatodea_contig11100:4314..4575Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11100 4315..4575 +
1622924187.6770403-UTR-S-dermatodea_contig11100:6439..77531622924187.6770403-UTR-S-dermatodea_contig11100:6439..7753Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11100 6440..7753 +
1694079078.3489413-UTR-S-dermatodea_contig11100:6439..77531694079078.3489413-UTR-S-dermatodea_contig11100:6439..7753Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11100 6440..7753 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924187.6339135-CDS-S-dermatodea_contig11100:4575..47551622924187.6339135-CDS-S-dermatodea_contig11100:4575..4755Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11100 4576..4755 +
1694079078.2884266-CDS-S-dermatodea_contig11100:4575..47551694079078.2884266-CDS-S-dermatodea_contig11100:4575..4755Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11100 4576..4755 +
1622924187.6424232-CDS-S-dermatodea_contig11100:5172..52471622924187.6424232-CDS-S-dermatodea_contig11100:5172..5247Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11100 5173..5247 +
1694079078.2959597-CDS-S-dermatodea_contig11100:5172..52471694079078.2959597-CDS-S-dermatodea_contig11100:5172..5247Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11100 5173..5247 +
1622924187.6514325-CDS-S-dermatodea_contig11100:5726..58671622924187.6514325-CDS-S-dermatodea_contig11100:5726..5867Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11100 5727..5867 +
1694079078.3065608-CDS-S-dermatodea_contig11100:5726..58671694079078.3065608-CDS-S-dermatodea_contig11100:5726..5867Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11100 5727..5867 +
1622924187.6633663-CDS-S-dermatodea_contig11100:6226..64391622924187.6633663-CDS-S-dermatodea_contig11100:6226..6439Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11100 6227..6439 +
1694079078.3376822-CDS-S-dermatodea_contig11100:6226..64391694079078.3376822-CDS-S-dermatodea_contig11100:6226..6439Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11100 6227..6439 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11100.723.1

>prot_S-dermatodea_contig11100.723.1 ID=prot_S-dermatodea_contig11100.723.1|Name=mRNA_S-dermatodea_contig11100.723.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=203bp
MHKASHPRIGVVDHVSVHPLGQGAQQTAREAGMAIARALGAEGLPVLLYG
DLKKGRGLAEVRRSTPYFSNGKLPEKIGADLGPNEVDPSRGMVTVGCTPL
VTNYNILLGTDDKRVAAQVTRSVREKDGGLRWVESLTLEREDGSYEAACN
LLRPKETTPAMVLDVAERKAALLGIEVVKAYETGLTEEQAVAAVSRFLGE
RG*
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mRNA from alignment at S-dermatodea_contig11100:4315..7753+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11100.723.1 ID=mRNA_S-dermatodea_contig11100.723.1|Name=mRNA_S-dermatodea_contig11100.723.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3439bp|location=Sequence derived from alignment at S-dermatodea_contig11100:4315..7753+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGTCAACCGCCGAGTCCGCCGCCGCTTTGCGCAATGCCATCCTTTCGGT AGTCTACGTATCCGAGGGCGCCAACACCGCCTTGCTTGATAACCTCGCGG ACGCGGCATCTACCACGACAAAAGGCGCCGGCCTCCTTCGGCAGTTCCGA GACACGACGTACCACCGCACGGGCTACACGATAGGGGGTAGCTGCCCGTC CTCCGTCGCCGAGGCTTCGATTGAGGTCAGCCGGCGCGCGCTTCGGGCCA TCGACCTCCGCATGCACAAGGCGAGCCACCCTCGAATCGGTGTCGTTGAT CACGTCTCGGTCCACCCGTTGGGGCAAGGAGCCCAACAAACGGCCAGGGA GGCCGGCATGGCCATCGCGAGAGCTTTGGGGGCCGAGGGTCTCCCCGTCT TGCTGTACGGCGACCTGAAGAAGGGAAGAGGATTGGCCGAGGTGCGACGA GCAAAACACCACCTCAATGGAAGAGTAACAAAGCACGGCGTTTTAGGCGT ACATGGTGGAGTCAGACAGCCTGTTCAGTGACAAACGGGAGATAGCCAAC CTGCCCGCTGGACTCCGCGGTTTTCCGAACTGCGTAGAAATTTCTAGCCC TTGCCGCAAAGGACAGGACCAGCCTTAGCAAGCAAGTGTTTAATACGGTT GGATTGCCAAGGGACTGTCTCCACGCATTCCTTCTGTCACGTCGACGTCA TGTACGGTGTGTGCGTCCAACTTTATCTTGGGAGTTTTAATTAGTATTCT GCCAAGTTGTGTGATCAAGCGTGAACCTTTCTGGTGTGCCGTCCCAGTTC ATATTTGTTTTCGTTCAAGACAGCCGTCCCATCTTTTTTTCGATGCCACC GCACTCAGGTGCGAAGATCGACACCCTATTTCTCCAACGGCAAGCTTCCG GAGAAGATAGGGGCGGATCTTGGGCCAAACGAGGTGGGATACCTGAGGGC TGTCGTTTGTTACAGATACCAGCGTGCGGCACTACCCCTGTGCACGCTCC CTGCTTGATAGCCGTGGACGCACAAAGAGGCGAGATTGACGACACTGCAA ACAAGATTATATGCAAGTTCATACGATCGGTGGGCATAGTATTCTTATTA GCATCTGGTGTGGCGCGTCAACGCAAGCTGTGCTTGCCGCTTGCTACCCA AGACAGGTAACGAGGGTTGCCGATGATGTGATGGATGTCCCGTCGACCCG TTTTAGAGGACAGGGCAAGACCACCAGTGCTTGCACTACCTGGCAACGTG CTATCCACGGTGTGCCTTCGTCAGGTAGACCAGGAAAAATATCCTGACCC GACAGACGGTCCCGACCTTATGCAGACAGCGACACACATGACCTTGATAC ACTATGCTGTTCGCTTCATTGCGTCACAGCTAGACCGCTTGCTGGATATG GTGCTTACACAGGTTGACCCGTCGCGAGGTATGGTTACCGTCGGCTGCAC TCCGCTCGTGACGAACTACAACATCCTCCTCGGCACAGACGACAAGCGCG TCGCCGCGCAAGTCACTCGCAGCGTGCGAGAGAAAGACGGCGGGCTACGT TGGGTACGTGCCGCCTTTTAGCGAGTATGCCTTGGACCGGTCAAAATTGG ACTGCGTCGTTGATTGGTGGCTGTTGCTTTCTGGGATTTTGCGCTCGAGG TGTTCTGATTCCGCTGGCCCGTTCGGTTGAACCCCCGGTGCGCGTCTCCC TCGAAGTCTCTGTCTACCTCACCCAAGAACTCATGCCGTCGTTTCCCAGC TCGTTCCCCTCGCTTTCGTATCCACAAGTGGTAGTGTAAGCTTTCGATGG TTGGGTGCTGACGTGTGTTTTACACGAGAGCCCGATCTCCGCCGTGTTAA TCGTAGCGCCGCGTTTTTTTCCGCTCGGGTATCAAATCAAATCCGCGCGC ACGTGTGAACAGGTCGAATCGCTCACCCTCGAAAGGGAAGACGGCAGCTA CGAAGCCGCTTGCAACCTCCTTCGGCCCAAAGAGACAACGCCCGCCATGG TGCTCGACGTGGCTGAGAGGAAAGCGGCCCTCCTTGGCATCGAGGTGGTG AAAGCTTACGAGACAGGCTTGACGGAGGAGCAAGCTGTTGCGGCCGTTTC TCGGTTTTTGGGTGAACGGGGCTAAGTAAAGGGTCGTCTTCGTCTTCGTG TGCGTTTGTGTAGGTATAATTTCCTATTTTCTTGTACTGGCCTCGCGTGG CGTATGGCTGTGTCACCCGTCGATGCGGCGAAGTAGGGTCGTTGTTTCTA TTGTGAAGACGCCGTGCGGTGGATGATGTTCGGTCGTTTGTGTCACACCG TTCTATTGGCCGTCTGATACCCTTTGATGTGTGGTACGAAGGCGTACGGA GTTGCGGTCGCATCGACTGAGTGATGTAGCCTCGTGGGCTTGTGCTGAGT TCCTTCCATACCCCATGGTGGCGGCTGTGTTTTGTTGTGCGTCGGGTGGT GTCCGTCTTCTTGTCCTTTCGGTGCGCGCTGGACGCTTGCGTGATGAGTA TCAATTGGCAGGCCTGATTTGGAGATGATGGCGAAGTGCAGTTAATGATG GCGACGTGGCGTCCTCTGGCACCGTATTTCCCTTCAATTCATACAGGTGT ATGCATGGGCACCCAACAATAATATTATTGTGAGGTGCCGCCCGCGGCAG GTTTAGGCTTCGTCACGTTGAAGGATAGTGGCAGGGGCGATCAGGGCGCC ACCAGCGCATTTTTCTCACCGCTTTGCGTGAGTGTCCCGCGAGAATCTCA AAGAATCGACGAAGACGTAGTCCCGTGCCCCCGGTGGGTCTTGCGGTTGA ATATCTCAGTCAGCTTGCTGGATTAAGCAATCGTGATGGAGCCCTGGATG AAGGATGGCACGGGCTGATGTAGCGTCTTCTGTCTCTTTTGTTATTTACC ATGTCACTTGTGACTAATCAGCCATTCCCGGCCTCGAGACTCTAGAGTCA ACTGACTGAATGACTTGCAAATATTTTGGGCCGCCAGTGTTCAGAGAGCT GACTCTACGATGGAGCGAATTCTCAGCTCTCAAAACGACTTCTTGTACAA GTACCGGTATTAAGACTAATAACTAGTTCTCTAATAAGCTAATCAGAGTC AACGGAGGAAGGGGGAAAGGAGTGGAGAGCTCTGGAGAGGAAATAATTGT TATAATCATTGATGCTTTTCCAGTCAGAGAAAATTGCGGCTATCGAAGGA AATCCTTTGTCAGGCCTGGTTAATCAACAAACCAAACCTTTGAGAAAACC CGTCGGCTCTTGGCTCTCCTTCAAGATAGATATATACTGTTACTTGTACA TAGCGCCAATGCGCCAATGCCAAGGCCGGAGTGCGAGAGCCCAGGCCAGA TCGGAAAAAATAACGGATTTGATGTCGAAGCTGACCGCGAGGGCAGAGAC TAGAGCGGAGGAGAGGGCGCGAGTAGCGCAGCATCAAGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig11100:4315..7753+

>mRNA_S-dermatodea_contig11100.723.1 ID=mRNA_S-dermatodea_contig11100.723.1|Name=mRNA_S-dermatodea_contig11100.723.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at S-dermatodea_contig11100:4315..7753+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCACAAGGCGAGCCACCCTCGAATCGGTGTCGTTGATCACGTCTCGGT
CCACCCGTTGGGGCAAGGAGCCCAACAAACGGCCAGGGAGGCCGGCATGG
CCATCGCGAGAGCTTTGGGGGCCGAGGGTCTCCCCGTCTTGCTGTACGGC
GACCTGAAGAAGGGAAGAGGATTGGCCGAGATGCACAAGGCGAGCCACCC
TCGAATCGGTGTCGTTGATCACGTCTCGGTCCACCCGTTGGGGCAAGGAG
CCCAACAAACGGCCAGGGAGGCCGGCATGGCCATCGCGAGAGCTTTGGGG
GCCGAGGGTCTCCCCGTCTTGCTGTACGGCGACCTGAAGAAGGGAAGAGG
ATTGGCCGAGGTGCGAAGATCGACACCCTATTTCTCCAACGGCAAGCTTC
CGGAGAAGATAGGGGCGGATCTTGGGCCAAACGAGGTGCGAAGATCGACA
CCCTATTTCTCCAACGGCAAGCTTCCGGAGAAGATAGGGGCGGATCTTGG
GCCAAACGAGGTTGACCCGTCGCGAGGTATGGTTACCGTCGGCTGCACTC
CGCTCGTGACGAACTACAACATCCTCCTCGGCACAGACGACAAGCGCGTC
GCCGCGCAAGTCACTCGCAGCGTGCGAGAGAAAGACGGCGGGCTACGTTG
GGTTGACCCGTCGCGAGGTATGGTTACCGTCGGCTGCACTCCGCTCGTGA
CGAACTACAACATCCTCCTCGGCACAGACGACAAGCGCGTCGCCGCGCAA
GTCACTCGCAGCGTGCGAGAGAAAGACGGCGGGCTACGTTGGGTCGAATC
GCTCACCCTCGAAAGGGAAGACGGCAGCTACGAAGCCGCTTGCAACCTCC
TTCGGCCCAAAGAGACAACGCCCGCCATGGTGCTCGACGTGGCTGAGAGG
AAAGCGGCCCTCCTTGGCATCGAGGTGGTGAAAGCTTACGAGACAGGCTT
GACGGAGGAGCAAGCTGTTGCGGCCGTTTCTCGGTTTTTGGGTGAACGGG
GCTAAGTCGAATCGCTCACCCTCGAAAGGGAAGACGGCAGCTACGAAGCC
GCTTGCAACCTCCTTCGGCCCAAAGAGACAACGCCCGCCATGGTGCTCGA
CGTGGCTGAGAGGAAAGCGGCCCTCCTTGGCATCGAGGTGGTGAAAGCTT
ACGAGACAGGCTTGACGGAGGAGCAAGCTGTTGCGGCCGTTTCTCGGTTT
TTGGGTGAACGGGGCTAA
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