mRNA_S-dermatodea_contig10.7.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10.7.1
Unique NamemRNA_S-dermatodea_contig10.7.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: D7G8M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M3_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 1.450e-121
Identity = 191/243 (78.60%), Postives = 210/243 (86.42%), Query Frame = 1 
Query:    1 AVAELPLGAAAAGGTRLVSEPAFELLFSEIIAYTGAYVAHTAASHAKDMARTASAGIK--GDAEEGGAKDLSEGDEEEQGGAMVEPSPASVGAGNALLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCGLVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVRAPGS 723
            A  E+P G+A A G RLVSEPAFELLFSEIIAYTGAYV+H+AASHA D  R + AG++  G+ E+GG       D  + GG++VEP+PASVGAG+ LLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWS+LF KQVDKLQTDHQGTFVLKD+NFRWTSRYAEDDT GSRDLV RLLQLPCGLVRGALANLGL AVVRA+FLD+RGG S LPAVSFTIK+R  GS
Sbjct:    5 ATGEVPAGSAVAAGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDRLRASEAGVEDEGEGEKGG---XXXDDGSDTGGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIRVGGS 244
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: A0A835ZD08_9STRA (Transport protein particle component, Bet3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD08_9STRA)

HSP 1 Score: 160 bits (405), Expect = 7.800e-43
Identity = 73/132 (55.30%), Postives = 100/132 (75.76%), Query Frame = 1 
Query:  316 ARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCGLVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVR 711
            AR+ES+G++VG RL ER CQ + + G+ LEA+KF+CKD W+E+F KQ+DKLQTDH+GTFVL++ NF+W ++YA D +   R+L    LQ  CGLVRGA+A L   A V+A F DE+   S+LPAVSFTI+++
Sbjct:   66 ARLESLGWDVGCRLTERLCQTKLLSGEPLEAVKFICKDFWTEVFRKQIDKLQTDHRGTFVLRELNFKWLAKYAPDKSRTDRNLAWFTLQFACGLVRGAMATLNQPATVKADFWDEKTDRSLLPAVSFTIRLK 197
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: A0A7S2UTW2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTW2_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.030e-42
Identity = 77/132 (58.33%), Postives = 99/132 (75.00%), Query Frame = 1 
Query:  274 GNALLPSDQ-AQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCGLVRGALANLGLSA-VVRAAFLDER 663
            G+ LL S+  A+ +  R+E MG+EVGYR VER  Q+R +  + LE IKF+CKD W+E+F KQVDKLQTDH+GTFVLKDA FRW  R+  D     + LV RLLQ PCG++RGALAN+GL+A VVRA F+D++
Sbjct:    1 GSGLLDSEAGAEALAHRLEGMGFEVGYRFVERVAQKRVIPSEPLEIIKFLCKDFWTEVFKKQVDKLQTDHRGTFVLKDAKFRWVLRFVADSDATGKQLVARLLQFPCGILRGALANMGLAAAVVRADFVDDQ 132
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: F0YPS8_AURAN (Uncharacterized protein n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPS8_AURAN)

HSP 1 Score: 141 bits (355), Expect = 4.080e-36
Identity = 67/132 (50.76%), Postives = 90/132 (68.18%), Query Frame = 1 
Query:  316 ARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCGLVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVR 711
            +R E  GYEVGYR VER  Q R +  D LE IKF+CKD+W+E+F KQ+DKLQT+H+G FVLKD  FRW +R + DD    + +   +LQ PCG++RGALANLG+ A V A +         LP+ SF+I+++
Sbjct:   28 SRPELHGYEVGYRFVERIAQARALAADHLEVIKFICKDVWNEIFGKQIDKLQTNHRGVFVLKDYTFRWLARVSSDDAEAMKRVTANILQFPCGVLRGALANLGIVATVTAEY-------GTLPSCSFSIRIQ 152
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: A0A2D4BMC0_PYTIN (Transport protein particle component, Bet3 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMC0_PYTIN)

HSP 1 Score: 134 bits (336), Expect = 3.930e-33
Identity = 64/148 (43.24%), Postives = 97/148 (65.54%), Query Frame = 1 
Query:  271 AGNALLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCGLVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVRA 714
            +G+A +  ++ +++  R+E+MGY VGYR VER+ + R    + L+ IKFVCKD W  +F KQ+DKLQT+H+G FV++D +FRW S ++      +RD+    L  PCGL+RGALANLG++A+V A         + LP   F IK+++
Sbjct:   42 SGDAEVAKNRKEELTMRLEAMGYXVGYRFVERSARDRPRMTEPLDVIKFVCKDFWIMIFKKQIDKLQTNHRGVFVVQDYSFRWLSGFSSSTDQHTRDMALLFLVFPCGLIRGALANLGITAIVNADL-------TTLPGCLFNIKIKS 182
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: K3WA95_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA95_GLOUD)

HSP 1 Score: 129 bits (325), Expect = 1.750e-31
Identity = 62/151 (41.06%), Postives = 97/151 (64.24%), Query Frame = 1 
Query:  259 ASVGAGNALLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCGLVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVR 711
            A++ +G   L  ++ +++  ++E+MGY+VGYR  ER+ + R    + L+ IKFVCKD W  +F KQ+DKLQT+H+G FV++D NFRW S ++      ++++    L  PCGL+RGALANLG++A+V A         + LP   F IK++
Sbjct:   45 ANLESGAIELAKNKKEELTIKLEAMGYDVGYRFAERSAKDRPRMLEPLDVIKFVCKDFWILIFKKQIDKLQTNHRGVFVVQDFNFRWLSSFSSASDQHTKEMALLFLVFPCGLIRGALANLGITAIVNADL-------TTLPGCLFNIKIK 188
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: A0A485KK91_9STRA (Aste57867_8427 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK91_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.120e-30
Identity = 70/160 (43.75%), Postives = 95/160 (59.38%), Query Frame = 1 
Query:  238 AMVE--PSPASVGAGNALLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCGLVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVR 711
            +MVE  PS A     +   PSD    + A++E+ GY+VGYR VER  + R    + L+ IKF+CKD W  +F KQ+DKLQT+H+G FVL+D NFRW    + +D   S+      L  PCGL+RGALANLG+ A+V A         + +P   F IK+R
Sbjct:   25 SMVERHPSSAEKAPEDVWTPSDD---LTAKLEAFGYDVGYRFVERFSRDRPRMLEPLDVIKFLCKDFWIHIFKKQIDKLQTNHRGVFVLQDFNFRWIQALSGEDDAESKQKALVFLIFPCGLIRGALANLGILAIVNADL-------NAVPGCVFNIKIR 174
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: A0A251TMA2_HELAN (Putative transport protein particle (TRAPP) component n=3 Tax=Asteraceae TaxID=4210 RepID=A0A251TMA2_HELAN)

HSP 1 Score: 126 bits (317), Expect = 1.160e-30
Identity = 65/135 (48.15%), Postives = 89/135 (65.93%), Query Frame = 1 
Query:  319 RIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDT----TGSRDLVTRLLQLPCGLVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVR 711
            RIE++GY+VG++L ER    R    D LEAIKF+CKD WSELF KQ+D L+T+H+GTFVL+D  FRW SR + D +    + ++D  + LL  PCG++RGAL+ LG+   V A         S LPA SF I+++
Sbjct:   36 RIEAIGYQVGHQLCERYTMERPRFTDHLEAIKFLCKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSADPSAETSSAAQDTTSMLLYFPCGIIRGALSTLGIPCAVSADI-------SNLPACSFVIRIK 163
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: A0A7S2HJ09_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HJ09_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.310e-30
Identity = 89/254 (35.04%), Postives = 127/254 (50.00%), Query Frame = 1 
Query:   52 VSEPAFELLFSEIIAYTGAYVAHTAASHAKDMARTASAGIKGDAEEGGAKDLSEGDEEEQGGAMVEPSPASVGAGNALLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGD----------------------------------QLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCGLVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVR 711
            VSE A+E L +EI+             H  D +  A+ G+K   ++ G +   +G ++++ G   +  PA        L    A++  A++E +G+ VGYRL ER  Q R + G                                   QLEA+KF+CK+ W+E+F KQ+DKLQT+H+G FVLKD   RW  R   DD T +R    ++L  PCGL+RGALANLG+ AVV   FL +      + A SF IKV+
Sbjct:   57 VSEVAYEFLLAEIL-------------HWVDTSAAAATGMKS-LQQQGTESSPQGGDKDKKGKQTQQQPAEDPRTREELTLLAAERAAAKVERLGFGVGYRLCERLAQSRPLLGPTPTGQGGGXXXXXXXGDASNANPDSPTIVISPAMQLEAVKFLCKEFWTEIFRKQIDKLQTNHRGVFVLKDHELRWLKRLPPDDET-ARVQAIKMLAFPCGLIRGALANLGIGAVVSCDFLAD---GKTMAACSFNIKVK 292
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BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Match: A0A7S1H2T6_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2T6_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.700e-30
Identity = 68/150 (45.33%), Postives = 91/150 (60.67%), Query Frame = 1 
Query:  301 AQQMEARIESMGYEVGYRLVERTCQRRWMGG-------------DQLEAIKFVCKDLWSELFMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCGLVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVR 711
            A+   +++E MGY VGYRL ER  Q +  G               QLEA+KF+CK+ W E+F KQ+DKLQT+H+G FVLKD + RW +R   +  + +R    ++L  PCGLVRGALANLG+ AVV   FL +    S   A SF IK++
Sbjct:   21 AEMAASKLERMGYSVGYRLCERLAQNKTFGAAAAGKDPAQAVAASQLEAVKFLCKEFWMEVFRKQIDKLQTNHRGVFVLKDMDLRWLTRLPPNQES-ARVAAIQMLAFPCGLVRGALANLGIPAVVSCDFLADGTNMS---ACSFNIKIK 166
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8M3_ECTSI1.450e-12178.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZD08_9STRA7.800e-4355.30Transport protein particle component, Bet3 n=1 Tax... [more]
A0A7S2UTW2_9STRA1.030e-4258.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F0YPS8_AURAN4.080e-3650.76Uncharacterized protein n=3 Tax=Aureococcus anopha... [more]
A0A2D4BMC0_PYTIN3.930e-3343.24Transport protein particle component, Bet3 n=2 Tax... [more]
K3WA95_GLOUD1.750e-3141.06Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A485KK91_9STRA1.120e-3043.75Aste57867_8427 protein n=1 Tax=Aphanomyces stellat... [more]
A0A251TMA2_HELAN1.160e-3048.15Putative transport protein particle (TRAPP) compon... [more]
A0A7S2HJ09_9STRA1.310e-3035.04Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1H2T6_9STRA1.700e-3045.33Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10contigS-dermatodea_contig10:64819..68369 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.1
Seed ortholog evalue9.1e-80
Seed eggNOG ortholog2880.D7G8M3
Preferred nameTRAPPC6B
KEGG rclassRC02795
KEGG koko:K02321,ko:K04706,ko:K20304
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko04120,ko04630,ko05160,map00230,map00240,map01100,map03030,map04120,map04630,map05160
KEGG ModuleM00261
GOsGO:0000045,GO:0000407,GO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005793,GO:0005794,GO:0005801,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006996,GO:0007033,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010506,GO:0010508,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016050,GO:0016192,GO:0016236,GO:0016239,GO:0016241,GO:0017016,GO:0017112,GO:0017137,GO:0019222,GO:0019899,GO:0022607,GO:0030008,GO:0031267,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031410,GO:0031503,GO:0031982,GO:0031984,GO:0032438,GO:0032991,GO:0033036,GO:0033059,GO:0034497,GO:0034613,GO:0034629,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043473,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048518,GO:0048522,GO:0048753,GO:0050789,GO:0050794,GO:0051020,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0061919,GO:0065003,GO:0065007,GO:0065009,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0090114,GO:0097708,GO:0098772,GO:0098791,GO:0099023,GO:1903232,GO:1905037,GO:1990070,GO:1990071,GO:1990072
EggNOG free text desc.ER to Golgi vesicle-mediated transport
EggNOG OGsKOG3316@1,KOG3316@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko04121,ko04131,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNO signalling/Golgi transport ligand-binding domain
Ec32 orthologEc-09_002340.1
Exons4
Model size1538
Cds size582
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10.7.1prot_S-dermatodea_contig10.7.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10 64963..67557 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924134.577402-UTR-S-dermatodea_contig10:64818..649621622924134.577402-UTR-S-dermatodea_contig10:64818..64962Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10 64819..64962 +
1694079040.3616726-UTR-S-dermatodea_contig10:64818..649621694079040.3616726-UTR-S-dermatodea_contig10:64818..64962Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10 64819..64962 +
1622924134.6266706-UTR-S-dermatodea_contig10:67557..683691622924134.6266706-UTR-S-dermatodea_contig10:67557..68369Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10 67558..68369 +
1694079040.4337208-UTR-S-dermatodea_contig10:67557..683691694079040.4337208-UTR-S-dermatodea_contig10:67557..68369Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10 67558..68369 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924134.5881798-CDS-S-dermatodea_contig10:64962..651091622924134.5881798-CDS-S-dermatodea_contig10:64962..65109Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10 64963..65109 +
1694079040.3727355-CDS-S-dermatodea_contig10:64962..651091694079040.3727355-CDS-S-dermatodea_contig10:64962..65109Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10 64963..65109 +
1622924134.5981278-CDS-S-dermatodea_contig10:66030..661801622924134.5981278-CDS-S-dermatodea_contig10:66030..66180Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10 66031..66180 +
1694079040.388367-CDS-S-dermatodea_contig10:66030..661801694079040.388367-CDS-S-dermatodea_contig10:66030..66180Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10 66031..66180 +
1622924134.607358-CDS-S-dermatodea_contig10:66797..668941622924134.607358-CDS-S-dermatodea_contig10:66797..66894Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10 66798..66894 +
1694079040.4026105-CDS-S-dermatodea_contig10:66797..668941694079040.4026105-CDS-S-dermatodea_contig10:66797..66894Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10 66798..66894 +
1622924134.6184497-CDS-S-dermatodea_contig10:67369..675571622924134.6184497-CDS-S-dermatodea_contig10:67369..67557Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10 67370..67557 +
1694079040.4193044-CDS-S-dermatodea_contig10:67369..675571694079040.4193044-CDS-S-dermatodea_contig10:67369..67557Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10 67370..67557 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10.7.1

>prot_S-dermatodea_contig10.7.1 ID=prot_S-dermatodea_contig10.7.1|Name=mRNA_S-dermatodea_contig10.7.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=194bp
MARTASAGIKGDAEEGGAKDLSEGDEEEQGGAMVEPSPASVGAGNALLPS
DQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSEL
FMKQVDKLQTDHQGTFVLKDANFRWTSRYAEDDTTGSRDLVTRLLQLPCG
LVRGALANLGLSAVVRAAFLDERGGASILPAVSFTIKVRAPGS*
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mRNA from alignment at S-dermatodea_contig10:64819..68369+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10.7.1 ID=mRNA_S-dermatodea_contig10.7.1|Name=mRNA_S-dermatodea_contig10.7.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3551bp|location=Sequence derived from alignment at S-dermatodea_contig10:64819..68369+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCCGTCGCGGAGTTGCCGCTGGGCGCGGCGGCGGCGGGAGGCACCAGGCT
GGTTTCCGAGCCGGCTTTCGAGCTCCTGTTCTCAGAGATCATTGCGTACA
CTGGGGCGTATGTCGCACACACTGCCGCGAGCCACGCCAAGGACATGGCG
AGAACCGCCTCGGCCGGCATCAAAGGGGACGCAGAAGAGGGGGGGGCTAA
AGACTTAAGCGAGGGTGACGAAGAGGAGCAAGGAGGCGCGATGGTGGAGC
CGAGTCCGGCGTCGGTCGGGGCGGGAAACGCGCTACTTCCGGTGAGAACC
TCCACATTTCTCCACATGTACTCTGTGATGGTAACGAGAGACGCGGTGTC
GCGCTCGAAGCTGTTACTATTAGGGACATAGGGATGGGCAATTCACGAAG
TGCCTGTCATAGGGATGGGCGAGCGAGCCCTTCGATCATGGTACTTTGGT
TTAAGACTGGGAGATAAGGATTCGATTGATGACAATCAGTGATATTTGTT
CGGCTGGATACAGAATACAACTCTCTGCTGGTAAATATAATTATTCATAT
TGGCATTACCATGTGCTACGTGTCGGTCATGCCCGGCAGCAATGAATGTA
CCCGCCTGTTCTGCATCTGGCTGCTTGGGATGTACCTTCAAACTCCCATG
CCGCCGCAGTACGACCTCGCACCGTTGTAGACCTGGTTGTAGACAAAACA
TGGCCACACGGCCACGCTATCTTGCCGGGAGGCTTGATGGACTACTTGTA
GTGCATCCATCGCGCCGCTACAATAGTGCAATTTGCTTTGAATTTTAATA
CTATGCTTGTACACTGTCTGACCACAAGTCGGGTCGGATTATGCCGATCG
GCTATACGTGTGCAAATCAATCAATCAATCAATCAATCAATCAATCAATC
AACACTAAACGAATCAGACTCACGCATCACCCGTCGCACCTTTCCGTCTC
TCTCCAGTCTCTAGAGAGAGACGGGGCGCGTGATCCTATGTGTCCTATTT
GGTGTCTTTGATTGAGGCACAACGATTACTAGGTGAAAAAAAGGCCACGG
TAAGAGGAAGGAAGGCCTTTGTTTTGACGGATGGAGTCAATAGCCGGACG
CACGGTGCACGCTGTACTTAAACTCGAGTGCTGACAACTTCTCTATGATA
GCTCTGCCTGAAACAACACCACTCTCCCTGCACAACTTCAACAACGTCGG
TCGCTCATGCAGTCGGACCAAGCGCAACAGATGGAAGCACGGATCGAGAG
CATGGGGTACGAAGTGGGTTATCGCCTCGTGGAGCGGACGTGCCAGAGAC
GCTGGATGGGGGGAGACCAACTCGAGGCGATCAAGTTCGTCTGCAAGGAT
TTGTGGTCCGAGGTGGCTAATCCATATTTGCCTCCCTGTTTGCTTTCTGT
GGTAACATTGCTAGGGTGGCTGGAAAATCAGATTGGTGTTGGCTTGCGCG
ATTACAGCTTCATTTACGAGTAAAGTCTGGGCCTCACTGCCGTGCAGAGG
GTGCCGTTTATTTAACGTAACTGAGAAGGCGTAGCAACAGGCTAGACGCT
CACGGTAGGGCACAGGAATTGTTTTAGGACTGCCATCTACTGCGCCAGAC
GCGATTGGACAGGTCGTTAATCCGCTCCCGCTTTATGCAGGGCCTCTTCA
AGCCAGACCCATCGATACACTTCATCAGTGCGTATGCATAGCCCTGGTGT
AGAAAGGGTGTAAGGGCATCGGCATGGGCTCTGAGTCGCGACCTTTCACG
TCCAGCTGTCGTTTTACTGGTGTCAAGTAGTATGCTTCGGCGACATGCCG
AAGCCCCTGGCTGCCATCTTCCACAAGCTAAGAGATTCGCGCTTTGCGCT
GGCAGTTGGGTCAGCCAAGCCTGCAACCCCTCTGTTCACCCCAACCTCCA
TCGATGTGTAGCTCATAAAAGCATCTGCTGTCTCACGATCTTGCAACCTC
CATTTCCGCACTCGTGGGGCGATCGGCAGCTGTTCATGAAACAGGTGGAT
AAGCTGCAGACTGACCACCAAGGAACTTTCGTCCTCAAGGACGCCAACTT
CCGGTGGACGTCGCGCTACGCGGAAGGTCAGACTAAAGTTGGCGAGCTCC
ACCGAGCCTCACTAACTACGTGGTTTGGTAACCGTGCACGAACAGTGCGC
TCGAGCGGAGTCGCTGCAGGGAAGAGCTCGTTTGGAAAACGTGTTTTGGT
ACAAAGGCGTGTGTATCTATCTGGCAGAGCTTCAAACGTGGGTGCCTCCG
CGTCGTGCCCCTTTTGGTGGCATACGGTGGTCTCGGATCCAGAAATATGC
GTAACATCGTAGCGTATCCGCATAAACGACCTCCCTTAGGAGGCGCATGC
GGTAACTCGGCGAACACATGCAAATTGGCTTTTGAGAATGCAAGTATCCG
CCCGGCGTATTGCTCCGCAGCTCTCAAATGGGACAAACTCGAAAAACCTT
TTCAGCGCTCGACGCGGCCCGCGTTATCACAACAATCTTGATTGTTCTCC
ATTGTCCGTGCTGCTGCCCCTCAACCTTCTTTCTCGACGTCACAACCTCA
GACGACACGACGGGGAGCCGCGACCTTGTCACCCGCCTGCTGCAGCTCCC
GTGCGGCCTCGTGCGCGGCGCGCTGGCCAACCTCGGCCTGTCTGCGGTGG
TTAGAGCGGCGTTCTTGGACGAACGGGGGGGGGCGTCCATTTTGCCGGCC
GTTTCTTTCACCATCAAAGTTCGAGCCCCTGGCAGCTAGCGCGTGTCTAC
TAAATTATACCTAAAATATTAAAAGTAAAAAAAACAACTTGTTTATTTTG
TGTGCCGCCCACTTTTCCTCTACGGTCGTGGTAACAAAATGATATGCGTG
TGTTTTTTTGTTTTGGAGGGAATTTAGGCTCGTGTTGTCTTGCGGGCGTG
ATCCGCCACAGTGAAAATGTTGGGATGGTTTGTCATATGGAATTCGATAT
TAAAAAGCTTGCGAGCTGATTGCATTCGTAGAGCTGCAATGGCTCTATTG
CTGGGATACTGGTGGCCAGCTGGTGTCTGGTGTTTCCCATGCAGTGCATG
TCTTGGCCTTGGAGCGGTTTTGTTCGCGTCAATTCCAATGCGTTATCGTC
ACGTCGATGAGGACAGGCCAAAGCCAAAACTTTTCTGGCGCGTCCTCTAT
CGAAAAAAGTCCGCAATTGTGCATGACAGGCGCCCACTGATGGCAGGTTG
GCTCCAGAGCCTATAATAGGTGCATACTGGACGGCTTGGGCCTCGAGTGA
AACAAACAAACTATTTAGAATACCTTGTCAATAATTAGGAAGCGTGGTTG
AAATATTATGTATTCACACGGACTCGTACGGTAAATGTACTGACGTCGCC
AGCGAGACATATCTTGCGGTGACACGTTGAGCGGCTTTCTTTTGCAATCG
TAAAGGAAGTCGCAAATGGAGTCGGGAGATCAGCTCCGTTGCCCTGCACT
CGAGCACATACGCACCTTTGCCCCATTAACCCTTTTGGGACTAAGGCTGT
TTCGGGTAACTGTTTGTTATTTTTTTTCACCCTTTTGGTACTAAGACCGG
G
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Coding sequence (CDS) from alignment at S-dermatodea_contig10:64819..68369+

>mRNA_S-dermatodea_contig10.7.1 ID=mRNA_S-dermatodea_contig10.7.1|Name=mRNA_S-dermatodea_contig10.7.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at S-dermatodea_contig10:64819..68369+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGAGAACCGCCTCGGCCGGCATCAAAGGGGACGCAGAAGAGGGGGG
GGCTAAAGACTTAAGCGAGGGTGACGAAGAGGAGCAAGGAGGCGCGATGG
TGGAGCCGAGTCCGGCGTCGGTCGGGGCGGGAAACGCGCTACTTCCGATG
GCGAGAACCGCCTCGGCCGGCATCAAAGGGGACGCAGAAGAGGGGGGGGC
TAAAGACTTAAGCGAGGGTGACGAAGAGGAGCAAGGAGGCGCGATGGTGG
AGCCGAGTCCGGCGTCGGTCGGGGCGGGAAACGCGCTACTTCCGTCGGAC
CAAGCGCAACAGATGGAAGCACGGATCGAGAGCATGGGGTACGAAGTGGG
TTATCGCCTCGTGGAGCGGACGTGCCAGAGACGCTGGATGGGGGGAGACC
AACTCGAGGCGATCAAGTTCGTCTGCAAGGATTTGTGGTCCGAGTCGGAC
CAAGCGCAACAGATGGAAGCACGGATCGAGAGCATGGGGTACGAAGTGGG
TTATCGCCTCGTGGAGCGGACGTGCCAGAGACGCTGGATGGGGGGAGACC
AACTCGAGGCGATCAAGTTCGTCTGCAAGGATTTGTGGTCCGAGCTGTTC
ATGAAACAGGTGGATAAGCTGCAGACTGACCACCAAGGAACTTTCGTCCT
CAAGGACGCCAACTTCCGGTGGACGTCGCGCTACGCGGAAGCTGTTCATG
AAACAGGTGGATAAGCTGCAGACTGACCACCAAGGAACTTTCGTCCTCAA
GGACGCCAACTTCCGGTGGACGTCGCGCTACGCGGAAGACGACACGACGG
GGAGCCGCGACCTTGTCACCCGCCTGCTGCAGCTCCCGTGCGGCCTCGTG
CGCGGCGCGCTGGCCAACCTCGGCCTGTCTGCGGTGGTTAGAGCGGCGTT
CTTGGACGAACGGGGGGGGGCGTCCATTTTGCCGGCCGTTTCTTTCACCA
TCAAAGTTCGAGCCCCTGGCAGCTAGACGACACGACGGGGAGCCGCGACC
TTGTCACCCGCCTGCTGCAGCTCCCGTGCGGCCTCGTGCGCGGCGCGCTG
GCCAACCTCGGCCTGTCTGCGGTGGTTAGAGCGGCGTTCTTGGACGAACG
GGGGGGGGCGTCCATTTTGCCGGCCGTTTCTTTCACCATCAAAGTTCGAG
CCCCTGGCAGCTAG
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