mRNA_S-dermatodea_contig11065.694.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: A0A6H5KRZ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRZ7_9PHAE) HSP 1 Score: 184 bits (468), Expect = 2.290e-53 Identity = 91/118 (77.12%), Postives = 104/118 (88.14%), Query Frame = 1
Query: 1 LARSQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPANTDVEDLEKIIVEESKKRVVNRDLAEGP 354
L ++VLLTTNVL+RGVDVPAVSLVVNYDMPT+GY++ DPDTYLHRIGRTGRFGRRGVAINLIQDD +RV+E I+RHFSP M+R A+TDVE+LEKIIVEESKKRV NRDL+ P
Sbjct: 442 LGHNKVLLTTNVLSRGVDVPAVSLVVNYDMPTMGYSQDPDPDTYLHRIGRTGRFGRRGVAINLIQDDSTFRVMESIDRHFSPTGSMLRQASTDVEELEKIIVEESKKRVENRDLSSEP 559
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: A0A835ZGD2_9STRA (ATP-dependent RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGD2_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.100e-37 Identity = 67/98 (68.37%), Postives = 82/98 (83.67%), Query Frame = 1
Query: 10 SQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPANTDVEDLEKII 303
S+VL+TTNVLARGVDVPAV+LVVNYDMP LG ++ D ++YLHRIGRTGRFGR+GVAIN +QD+DAY VLE IERHFSP M+R A D+E+L ++
Sbjct: 280 SKVLITTNVLARGVDVPAVTLVVNYDMPYLGRSKDPDYESYLHRIGRTGRFGRKGVAINFVQDNDAYSVLEQIERHFSPSKQMIRRAPDDMEELTNLV 377
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: A0A7S2UVW1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVW1_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.290e-31 Identity = 64/100 (64.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query: 7 RSQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPA-NTDVEDLEKII 303
R +VL+TTNVLARGVDVP+VSLV+NYD+P Y +AD +TYLHRIGRTGRFGR+G AIN + DD +L DIERHFSPG M+ A DVE+LE++I
Sbjct: 488 RKKVLVTTNVLARGVDVPSVSLVINYDLPVT-YQNRADFETYLHRIGRTGRFGRKGCAINFVNDDQDQAILADIERHFSPGREMILQAPGDDVEELERVI 586
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: H0GNF2_SACCK (Dbp5p n=1 Tax=Saccharomyces cerevisiae x Saccharomyces kudriavzevii (strain VIN7) TaxID=1095631 RepID=H0GNF2_SACCK) HSP 1 Score: 115 bits (288), Expect = 2.080e-28 Identity = 55/99 (55.56%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 7 RSQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPANTDVEDLEKII 303
RS+VL+TTNVLARG+D+P VS+VVNYD+PTL QADP TY+HRIGRTGRFGR+GVAI+ + D +++ +L I+++F + M R D +++EKI+
Sbjct: 271 RSKVLITTNVLARGIDIPTVSMVVNYDLPTLA-NGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYFG-DIEMTRVPTDDWDEVEKIV 367
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: A0A1E5R4R2_9ASCO (ATP-dependent RNA helicase DBP5 n=3 Tax=Hanseniaspora TaxID=29832 RepID=A0A1E5R4R2_9ASCO) HSP 1 Score: 116 bits (290), Expect = 3.020e-28 Identity = 56/103 (54.37%), Postives = 80/103 (77.67%), Query Frame = 1
Query: 10 SQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQ-----ADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPANTDVEDLEKII 303
S+VL+TTNVLARG+D+P+VSLVVNYD+PT+ + + ADP TY+HRIGRTGRFGR GVA++ + DD++ +VL+DIE +F P + + + D+E LEK++
Sbjct: 351 SKVLITTNVLARGIDIPSVSLVVNYDLPTMPHPKNKSLYVADPSTYVHRIGRTGRFGRPGVAVSFVSDDNSRKVLKDIETYF-PDIEIQKLPTDDIEALEKMV 452
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: DBP5_YEAS7 (ATP-dependent RNA helicase DBP5 n=17 Tax=Saccharomyces TaxID=4930 RepID=DBP5_YEAS7) HSP 1 Score: 115 bits (288), Expect = 7.280e-28 Identity = 55/99 (55.56%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 7 RSQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPANTDVEDLEKII 303
RS+VL+TTNVLARG+D+P VS+VVNYD+PTL QADP TY+HRIGRTGRFGR+GVAI+ + D +++ +L I+++F + M R D +++EKI+
Sbjct: 380 RSKVLITTNVLARGIDIPTVSMVVNYDLPTLA-NGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYFG-DIEMTRVPTDDWDEVEKIV 476
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: A0A7H9HZM7_9SACH (Uncharacterized protein n=3 Tax=Torulaspora TaxID=4948 RepID=A0A7H9HZM7_9SACH) HSP 1 Score: 115 bits (287), Expect = 8.550e-28 Identity = 56/99 (56.57%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 7 RSQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPANTDVEDLEKII 303
RS+VL+TTNVLARG+D+P VS+VVNYD+PTL Q DP TY+HRIGRTGRFGR+GVAI+ + D +Y VL I+++F + M R D +++EKI+
Sbjct: 361 RSKVLITTNVLARGIDIPTVSMVVNYDLPTLP-GGQPDPSTYIHRIGRTGRFGRKGVAISFVHDKKSYNVLSSIQKYFG-DIEMTRVPTNDWDEVEKIV 457
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: A0A6V2XVD0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XVD0_HETAK) HSP 1 Score: 115 bits (287), Expect = 1.500e-27 Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 7 RSQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPA-NTDVEDLEKII 303
+ +VL++TNVLARGVDVPAVSLVVNYD+PT Y Q D ++YLHRIGRTGRFGR+GVAIN + ++ +LE I HFSP M+ A D+E+LEKII
Sbjct: 440 KRKVLISTNVLARGVDVPAVSLVVNYDIPTT-YDGQPDFESYLHRIGRTGRFGRKGVAINFVDNEHDKGLLEQIANHFSPARTMIFEAPGDDIEELEKII 538
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: A7TPZ9_VANPO (Uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) TaxID=436907 RepID=A7TPZ9_VANPO) HSP 1 Score: 114 bits (285), Expect = 1.870e-27 Identity = 56/99 (56.57%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 7 RSQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPANTDVEDLEKII 303
RS+VL+TTNVLARG+D+P VS+VVNYD+PT QADP TY+HRIGRTGRFGR+GVAI+ + D +Y+VL +I+ +F + M R D +++EKI+
Sbjct: 376 RSKVLITTNVLARGIDIPTVSMVVNYDLPT-SLNGQADPATYIHRIGRTGRFGRKGVAISFVHDKKSYQVLSNIKDYFG-DIEMTRVPTDDWDEVEKIV 472
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Match: A0A642VC74_9ASCO (Uncharacterized protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642VC74_9ASCO) HSP 1 Score: 114 bits (285), Expect = 2.830e-27 Identity = 55/99 (55.56%), Postives = 74/99 (74.75%), Query Frame = 1
Query: 7 RSQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRTGRFGRRGVAINLIQDDDAYRVLEDIERHFSPGVPMVRPANTDVEDLEKII 303
RS+VL+TTNVLARG+D+P+VS+VVNYD+P L + DP TYLHRIGRTGRFGR GV++ LI D +YR + I HF G+ M + + D +++EKI+
Sbjct: 439 RSKVLITTNVLARGIDIPSVSMVVNYDLP-LDQDGRPDPSTYLHRIGRTGRFGRVGVSVTLIHDKTSYRQFQQILDHFGEGIEMTKLPHDDWDEVEKIV 536 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11065.694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11065.694.1 >prot_S-dermatodea_contig11065.694.1 ID=prot_S-dermatodea_contig11065.694.1|Name=mRNA_S-dermatodea_contig11065.694.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=120bp LARSQVLLTTNVLARGVDVPAVSLVVNYDMPTLGYTRQADPDTYLHRIGRback to top mRNA from alignment at S-dermatodea_contig11065:162..1081+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11065.694.1 ID=mRNA_S-dermatodea_contig11065.694.1|Name=mRNA_S-dermatodea_contig11065.694.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=920bp|location=Sequence derived from alignment at S-dermatodea_contig11065:162..1081+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11065:162..1081+ >mRNA_S-dermatodea_contig11065.694.1 ID=mRNA_S-dermatodea_contig11065.694.1|Name=mRNA_S-dermatodea_contig11065.694.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at S-dermatodea_contig11065:162..1081+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |