prot_S-dermatodea_contig11005.667.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11005.667.1
Unique Nameprot_S-dermatodea_contig11005.667.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length135
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig11005.667.1 vs. uniprot
Match: D7FK21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK21_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 6.670e-37
Identity = 90/138 (65.22%), Postives = 105/138 (76.09%), Query Frame = 0 
Query:    1 MEEFDKGARVMDIQISNIISRGRGNFTRSTGPLSETTPFPAALAAQFADLAEDEAAFYEDLGXXXXXXXXXXXXXXXXGGLSDEEVTALLDACGKGLKHVVCLSIGSSTGXXXXXXXXXXXX---DEKGFPGESAAEQ 135
            MEEFDK ARVMDI+++NII+RGR NFT+ TGPL++ T FPA++AA+FA LAEDEAAFYE+LG                 GLSDEEV  LLDACGK LKHVVCLS+G +  XXXXXXXXXXXX   ++KGFPGES AEQ
Sbjct:  187 MEEFDKEARVMDIKVANIIARGRSNFTQFTGPLTDQTAFPASVAAEFAYLAEDEAAFYEELGGGGGEDAAKGE------GLSDEEVVGLLDACGKSLKHVVCLSVGGAXXXXXXXXXXXXXXXXAEDKGFPGESTAEQ 318
[Close]
BLAST of mRNA_S-dermatodea_contig11005.667.1 vs. uniprot
Match: A0A6H5KAR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAR2_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 4.130e-20
Identity = 44/62 (70.97%), Postives = 56/62 (90.32%), Query Frame = 0 
Query:    1 MEEFDKGARVMDIQISNIISRGRGNFTRSTGPLSETTPFPAALAAQFADLAEDEAAFYEDLG 62
            MEEFDK ARVMDI+++NII+RG+ NFT+ TGPL++ T FPA++AA+FA LAEDEAAFYE+LG
Sbjct:  274 MEEFDKEARVMDIKVANIIARGKSNFTQFTGPLTDQTAFPASVAAEFAYLAEDEAAFYEELG 335
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11005.667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK21_ECTSI6.670e-3765.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAR2_9PHAE4.130e-2070.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11005contigS-dermatodea_contig11005:4920..7671 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11005.667.1mRNA_S-dermatodea_contig11005.667.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11005 4920..7692 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11005.667.1 ID=prot_S-dermatodea_contig11005.667.1|Name=mRNA_S-dermatodea_contig11005.667.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=135bp
MEEFDKGARVMDIQISNIISRGRGNFTRSTGPLSETTPFPAALAAQFADL
AEDEAAFYEDLGGGGGGGGGGDGGAKVGGGLSDEEVTALLDACGKGLKHV
VCLSIGSSTGGGGGLFGGGGGGDEKGFPGESAAEQ
back to top