prot_S-dermatodea_contig10987.646.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10987.646.1
Unique Nameprot_S-dermatodea_contig10987.646.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length165
Homology
BLAST of mRNA_S-dermatodea_contig10987.646.1 vs. uniprot
Match: D7FN14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN14_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.500e-46
Identity = 92/163 (56.44%), Postives = 111/163 (68.10%), Query Frame = 0
Query:    5 APAGVKAIFSVNGHEEHRFDSSGRRDAPPPPAG-VGKQGPVEGTDKYDHRYTGRHDHGTLPALKSGGPHEELINALLGAKQDSDSFLTGLMNQELAAKSDDGHSRGAPGGHAPPKTPQNPSPEAMEL--CDGGRGGGGADRGEEEEALPPTPPVTQPAKRPKP 164
            A  GVKA F V G   H+FDSSG++D+ P  A  VG++GPVEGTDKYD RYTGRHDHGTLPALK+GGPH EL+ A+  AK DSD+FLT L+N+E +A+ D   +   PGG A    P   + EAMEL  C  GRG   + +G     LPPTPP  QPAKRP+P
Sbjct:   16 AVVGVKATFRVQGQAVHQFDSSGKKDSTPAAAAAVGEEGPVEGTDKYDCRYTGRHDHGTLPALKTGGPHGELVKAIHDAKADSDAFLTELINKEASAR-DSKRTEADPGGAALDGKPGATAGEAMELEPCGAGRGAEASPQG---VPLPPTPPEAQPAKRPRP 174          
BLAST of mRNA_S-dermatodea_contig10987.646.1 vs. uniprot
Match: A0A6H5KA65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA65_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 8.270e-39
Identity = 84/172 (48.84%), Postives = 107/172 (62.21%), Query Frame = 0
Query:    5 APAGVKAIFSVNGHEEHRFDSSGRRDAPPPPAG------------VGKQGPVEGTDKYDHRYTGRHDHGTLPALKSGGPHEELINALLGAKQDSDSFLTGLMNQELAAKSDDGHSRGAPGGHAPPKTPQNPSPEAMELCDGGRGGGGADRGEEEEALPPTPPVTQPAKRPKP 164
            A  GVKA F V G   H+FDS G++D+                  VG++GP+EGTDKY++RYTGRHDHGTLPALK+GG H EL+ A+  AK DSD+FLT L+N+E +A+ D   +   PGG      P+  + EAMEL   G GGG  +   +  ALPPTPP  Q AKRP+P
Sbjct:   13 AVVGVKATFRVQGKTVHQFDSFGKKDSTAXXXXXXXXXXXXXXXVVGEEGPMEGTDKYNYRYTGRHDHGTLPALKTGGSHGELVKAIHDAKADSDAFLTELLNKEASAR-DSNRTEAEPGGAGLGGKPRATTGEAMELEPCGAGGG-PEASPQGGALPPTPPEAQLAKRPRP 182          
BLAST of mRNA_S-dermatodea_contig10987.646.1 vs. uniprot
Match: A0A7S3PNC3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PNC3_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 8.890e-6
Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 0
Query:   47 TDKYDHRYTGRHDHGTLPALKSGGPH-EELINALLGAKQDSDSFLTGLMNQE 97
            +D+Y + YTG+HDHG LP LKSG P    L++ L   K++S   L GL+ +E
Sbjct:   49 SDRYTYEYTGKHDHGKLPGLKSGDPKLNNLLHFLKLVKEESSKALAGLVQEE 100          
BLAST of mRNA_S-dermatodea_contig10987.646.1 vs. uniprot
Match: A0A482SF24_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SF24_9ARCH)

HSP 1 Score: 51.2 bits (121), Expect = 3.720e-5
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0
Query:   52 HRYTGRHDHGTLPALKSGGPHEELINALLGAKQDSDSFLTGLMNQ 96
            + Y+GRHD G LP LKS GP  ++I AL  AK  SDSFLT  +NQ
Sbjct:   55 YEYSGRHDGGPLPILKSEGPMADVIAALAQAKVVSDSFLTDRINQ 99          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10987.646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FN14_ECTSI2.500e-4656.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA65_9PHAE8.270e-3948.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3PNC3_9STRA8.890e-646.15Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A482SF24_9ARCH3.720e-557.78Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10987contigS-dermatodea_contig10987:2384..4858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10987.646.1mRNA_S-dermatodea_contig10987.646.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10987 2203..5650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10987.646.1 ID=prot_S-dermatodea_contig10987.646.1|Name=mRNA_S-dermatodea_contig10987.646.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=165bp
MSDTAPAGVKAIFSVNGHEEHRFDSSGRRDAPPPPAGVGKQGPVEGTDKY
DHRYTGRHDHGTLPALKSGGPHEELINALLGAKQDSDSFLTGLMNQELAA
KSDDGHSRGAPGGHAPPKTPQNPSPEAMELCDGGRGGGGADRGEEEEALP
PTPPVTQPAKRPKP*
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