prot_S-dermatodea_contig10949.628.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10949.628.1
Unique Nameprot_S-dermatodea_contig10949.628.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length41
Homology
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BLAST of mRNA_S-dermatodea_contig10949.628.1 vs. uniprot
Match: D7FL93_ECTSI (Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL93_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 1.320e-7
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    1 MEGIMSVPTFKFFKGGEEITAISGADGKAVEEAVAKLAES 40
            M  I SVPTFKFFKGG+EI ++SGAD   +E+ VAKLAE+
Sbjct:   99 MAHIKSVPTFKFFKGGQEIDSMSGADANLLEQNVAKLAEA 138
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10949.628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FL93_ECTSI1.320e-765.00Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..40
e-value: 2.4E-7
score: 32.3
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 3..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10949contigS-dermatodea_contig10949:5099..6296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10949.628.1mRNA_S-dermatodea_contig10949.628.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10949 4159..6440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10949.628.1 ID=prot_S-dermatodea_contig10949.628.1|Name=mRNA_S-dermatodea_contig10949.628.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=41bp
MEGIMSVPTFKFFKGGEEITAISGADGKAVEEAVAKLAES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf