mRNA_S-dermatodea_contig10949.627.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: A0A6H5LEY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEY9_9PHAE) HSP 1 Score: 170 bits (431), Expect = 7.790e-46 Identity = 96/182 (52.75%), Postives = 131/182 (71.98%), Query Frame = 1
Query: 1 LLDSRHNNRTTNRRELYVKNSEDALSSAAAEMAHKILQNKRDRFERTQQGKAGGSSXXXSARRNADVELADPVITALRGGGRTRSGVATNRRDEQEVEVDLRKQATETLIASMDRMGADNALKFLESKGSEAAKDIRREIRDLKAKAAVGVSLQGAIKVAMKQNKTSEGRRTWQTLLIAAAF 546
L+D ++ NR++N+R++YV+N+E++++S A EMA +L+NKR+++E+ Q G +GGSS RRNAD E+ADPV+ ALRGGGRTRS V T + E VD R+Q TET +ASMD MG DNALK LE S AKD R+ +R+L+ K + VSL+ AI+ A KQ +T EG RT QT+L AAA
Sbjct: 50 LVDKKNPNRSSNKRQVYVENTEESITSKALEMARIVLKNKREKWEKAQ-GHSGGSSSGGGPRRNADREVADPVMAALRGGGRTRSRVVTIQPAEPTAPVDWRQQCTETFLASMDSMGYDNALKHLEEIVSTFAKDARKRLRELEDKVSTAVSLERAIEQARKQRRTKEGSRTLQTILTAAAI 230
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: A0A6H5KHT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT7_9PHAE) HSP 1 Score: 159 bits (403), Expect = 3.540e-42 Identity = 93/189 (49.21%), Postives = 132/189 (69.84%), Query Frame = 1
Query: 1 LLDSRHNNRTTNRRELYVKNSEDALSSAAAEMAHKILQNKRDRFERTQQGKAGGS-SXXXSARRNADVELADPVITALRGGGRTRSGVATNRRDEQEVEVDLRKQATETLIASMDRMGADNALKFLESKGSEAAKDIRREIRDLKAKAAVGVSLQGAIKVAMKQNKTSEGRRTWQTLLIAAAFRRPADD 564
L+D + NR++N+++++V N+E+ ++S A EMAH++L+NKR+R+E+ G++GGS S ARRNAD E+AD + ALRG GRTRSG + E D R+Q+TET IASMD MG D AL LE GS+ AK+ R +R+L+AK + VSL+ A++ A +Q +T EG RT+QT+L AAAF P DD
Sbjct: 50 LVDKKSPNRSSNKQQVFVANTEERVASKALEMAHRLLKNKRERWEKAH-GRSGGSRSSGGGARRNADREVADLFMAALRGCGRTRSGSTISEPAEPTAPADWRQQSTETFIASMDSMGYDKALHHLEGTGSKFAKETRVRLRELEAKVSTAVSLERALEQAQRQRRTKEGSRTFQTILTAAAF--PVDD 235
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.330e-40 Identity = 94/169 (55.62%), Postives = 123/169 (72.78%), Query Frame = 1
Query: 49 YVK-NSEDALSSAAAEMAHKILQNKRDRFERTQQGKAGGSSXXXSARRNADVELADPVITALRGGGRTRSGVATNRRDEQEVE-VDLRKQATETLIASMDRMGADNALKFLESKGSEAAKDIRREIRDLKAKAAVGVSLQGAIKVAMKQNKTSEGRRTWQTLLIAAAFR 549
YVK N E+A+S AAE+ K+L+NKR+++++ QQ ++GGSS RR AD +ADPVITALRGGGRTRS V T+ EQE E V+ R+ ATET +ASMD MG +NAL+ L+ GS AKD +R+L+AKA+ VSL+ AI+ A KQ +T+EGR T QT+L AAAFR
Sbjct: 42 YVKENPEEAVSKQAAELTDKVLKNKREQWQKAQQ-RSGGSSRSSGVRRTADSAVADPVITALRGGGRTRSRVQTSEPVEQETEPVNWRQHATETFLASMDSMGHENALRHLKKIGSTFAKDTLVRLRELEAKASTAVSLERAIEQAPKQPRTTEGRHTLQTILTAAAFR 209
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: A0A6H5K847_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K847_9PHAE) HSP 1 Score: 147 bits (372), Expect = 7.300e-39 Identity = 91/182 (50.00%), Postives = 120/182 (65.93%), Query Frame = 1
Query: 1 LLDSRHNNRTTNRRELYVKNSEDALSSAAAEMAHKILQNKRDRFERTQQGKAGGSSXXXSARRNADVELADPVITALRGGGRTRSGVATNRRDEQEVEVDLRKQATETLIASMDRMGADNALKFLESKGSEAAKDIRREIRDLKAKAAVGVSLQGAIKVAMKQNKTSEGRRTWQTLLIAAAF 546
L+DS+H NR++ Y K+SE+A+S A E+ K+L+NKR+R+++ Q XXX RR D +ADPVI ALRG GRTR V T + E VD R+Q+ ET +ASMD MG DNAL+ LE GS AKD R+ +R L+ K + VSL+ AI+ A KQ +T+EGRRT QT+L AAAF
Sbjct: 211 LVDSKHKNRSSQTYSGYAKDSEEAVSEKAEELTDKVLKNKRERWQKAQXX-XXXXXXXXXVRRTEDSAVADPVIMALRGVGRTRPRVVTIQPTEPTAPVDWRQQSAETFLASMDSMGYDNALQHLEKIGSTFAKDTRKRLRGLEDKVSTAVSLERAIEQAQKQRRTNEGRRTLQTILTAAAF 391
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: A0A6H5KCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ5_9PHAE) HSP 1 Score: 140 bits (354), Expect = 3.290e-37 Identity = 87/163 (53.37%), Postives = 112/163 (68.71%), Query Frame = 1
Query: 85 AAEMAHKILQNKRDRFERTQQGKAGGSSXXXSARRNADVELADPVITALRGGGRTRSGVATNRRDEQEVE-VDLRKQATETLIASMDRMGADNALKFLESKGSEAAKDIRREIRDLKAKAAVGVSLQGAIKVAMKQNKTSEGRRTWQTLLIAAAFRRPADDDG 570
AAE+ K+L++KR+++++ QQ ++GGSS RR AD +ADPVITALRGGGRTRS V T+ EQE V+ R+ ATET +ASMD MG +NAL LE GS AKD +R+L+AKA+ VSL+ I+ A Q +T EGR T QT+L AAAF P D DG
Sbjct: 13 AAELTDKVLKHKREQWQKAQQ-RSGGSSRSSGVRRTADSAVADPVITALRGGGRTRSRVQTSEPAEQETAPVNWRQHATETFLASMDSMGYENALLHLEKIGSTFAKDTLVRLRELEAKASTAVSLERVIEQAQMQRRTIEGRHTLQTILTAAAF--PVDVDG 172
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: A0A6H5KM14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM14_9PHAE) HSP 1 Score: 139 bits (350), Expect = 5.610e-35 Identity = 89/176 (50.57%), Postives = 115/176 (65.34%), Query Frame = 1
Query: 22 NRTTNRRELYVKNSEDALSSAAAEMAHKILQNKRDRFERTQQGKAGGSSXXXSARRNADVELADPVITALRGGGRTRSGVATNRRDEQEVEVDLRKQATETLIASMD-RMGADNALKFLESKGSEAAKDIRREIRDLKAKAAVGVSLQGAIKVAMKQNKTSEGRRTWQTLLIAAAF 546
NR +++ YV+N+E+A+SS A EMA ++L+ KRD F R G XXX D ELADPVI ALRGGGRTRSGV T + DEQE E+ +A ++ + + +AL+FL SKG +AAK++RR IR+L A VG SL+ AI+ A KQ TS+G RTWQTLL AAAF
Sbjct: 76 NRPSDKETRYVENTEEAVSSEALEMADRVLKKKRDVFLRENGGDXXXXXXXXXXXXXXDDELADPVIVALRGGGRTRSGVETGKPDEQE--------DAESFLAFLNSKESSSDALEFLASKGLDAAKEVRRRIRELDVLARVGASLKRAIEQAQKQRSTSDGHRTWQTLLTAAAF 243
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: A0A6H5KGU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU5_9PHAE) HSP 1 Score: 138 bits (348), Expect = 2.130e-34 Identity = 89/176 (50.57%), Postives = 114/176 (64.77%), Query Frame = 1
Query: 22 NRTTNRRELYVKNSEDALSSAAAEMAHKILQNKRDRFERTQQGKAGGSSXXXSARRNADVELADPVITALRGGGRTRSGVATNRRDEQEVEVDLRKQATETLIASMD-RMGADNALKFLESKGSEAAKDIRREIRDLKAKAAVGVSLQGAIKVAMKQNKTSEGRRTWQTLLIAAAF 546
NR +++ YV+N+E+A SS A EMA ++L+ KRD F R G XXX D ELADPVI ALRGGGRTRSGV T + DEQE E+ +A ++ + + +AL+FL SKG +AAK++RR IR+L A VG SL+ AI+ A KQ TS+G RTWQTLL AAAF
Sbjct: 57 NRPSDKETRYVENTEEAASSEALEMADRVLKKKRDVFLRENGGXXXXXXXXXXXXXXXDDELADPVIVALRGGGRTRSGVETGKPDEQE--------DAESFLAFLNSKESSSDALEFLASKGLDAAKEVRRRIRELDVLARVGASLKRAIEQAQKQRSTSDGHRTWQTLLTAAAF 224
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: A0A6H5JQZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ3_9PHAE) HSP 1 Score: 129 bits (324), Expect = 2.460e-32 Identity = 72/156 (46.15%), Postives = 103/156 (66.03%), Query Frame = 1
Query: 97 AHKILQNKRDRFERTQQGKAGGSSXXXSARRNADVELADPVITALRGGGRTRSGVATNRRDEQEVEVDLRKQATETLIASMDRMGADNALKFLESKGSEAAKDIRREIRDLKAKAAVGVSLQGAIKVAMKQNKTSEGRRTWQTLLIAAAFRRPADD 564
++K+L+NKR+R+E+ + G SS A+ NAD E+ADPV+ A RG GRTR GV + E D R+Q+TET +ASMD MG + AL LE GS+ AK+ R +R+L+AK + VSL+ A++ A +Q +T EG T+QT+L AA++ P DD
Sbjct: 48 SNKLLKNKRERWEKARGRSGGSSSSGGGAKTNADREVADPVMAAFRGCGRTRYGVTISEPAEPTAPADWRQQSTETFVASMDSMGYNKALHHLEGTGSKFAKETRVRVRELEAKVSTAVSLERALEQAQRQRRTKEGSHTFQTILTAASY--PVDD 201
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: D7FQY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY8_ECTSI) HSP 1 Score: 123 bits (308), Expect = 2.620e-32 Identity = 73/147 (49.66%), Postives = 100/147 (68.03%), Query Frame = 1
Query: 1 LLDSRHNNRTTNRRELYVKNSEDALSSAAAEMAHKILQNKRDRFERTQQGKAGGSSXXXSARRNADVELADPVITALRGGGRTRSGVATNRRDEQEVEVDLRKQATETLIASMDRMGADNALKFLESKGSEAAKDIRREIRDLKAKA 441
L+D++H R++ Y KN+E+A+S A E+ K+L+NKR+++++ QQ ++G XX RR AD +ADPVI ALR GGRTRS V T + E VD R+Q+TET +ASMD MG DNALK LE GS AKD R+ +R+L+ KA
Sbjct: 7 LVDAKHKKRSSQTYSGYAKNTEEAVSEKAKELTDKVLKNKREQWQKAQQ-RSGXXXXXGGVRRTADSAVADPVIMALRSGGRTRSRVVTIQPAEPTAPVDWRQQSTETFLASMDSMGYDNALKHLEEIGSTFAKDTRKRLRELEDKA 152
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Match: A0A6H5KDQ3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ3_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 1.170e-13 Identity = 69/196 (35.20%), Postives = 99/196 (50.51%), Query Frame = 1
Query: 1 LLDSRHNNRTTNRRELYVKNSEDALSSAAAEMAHKILQNKRDRFERTQQGKAGGSSXXXSARRNADVELADPVITALRG---GGRTRSGVATN-RRDEQEVEVDLRKQATETLIASMDRMGADNALKFLESKGSEAAKDIRREIRDLKAKAAVGVSLQGAIKVAMKQNKTSEGRRTWQTLLIAAAFRRPADDDGEE 576
LLDS+ R Y + SE LS+ A E A I+ KR+ + + GGS AD ++ PVI A++G G RTRS TN + E + D R ++E+ +A+M M L FL +G AA +R+E D + + + A+ A Q +T+EGRRT+QT+L AAAF DDG+E
Sbjct: 45 LLDSKRKGRKAAENTGYCEASEVVLSNLAREKADAIMAGKRNAARKNGIPQGGGSGGC-----GADRVMSCPVIAAIQGSHEGLRTRSSATTNPAANNPEPQPDWR-DSSESFLAAMRSMAEGELLDFLAGQGVAAADLLRKEQADARDARKMVAGTKKALAAASTQGRTNEGRRTFQTILTAAAF---DGDDGDE 231 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10949.627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10949.627.1 >prot_S-dermatodea_contig10949.627.1 ID=prot_S-dermatodea_contig10949.627.1|Name=mRNA_S-dermatodea_contig10949.627.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=194bp LLDSRHNNRTTNRRELYVKNSEDALSSAAAEMAHKILQNKRDRFERTQQGback to top mRNA from alignment at S-dermatodea_contig10949:577..1565+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10949.627.1 ID=mRNA_S-dermatodea_contig10949.627.1|Name=mRNA_S-dermatodea_contig10949.627.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=989bp|location=Sequence derived from alignment at S-dermatodea_contig10949:577..1565+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10949:577..1565+ >mRNA_S-dermatodea_contig10949.627.1 ID=mRNA_S-dermatodea_contig10949.627.1|Name=mRNA_S-dermatodea_contig10949.627.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at S-dermatodea_contig10949:577..1565+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |