prot_S-dermatodea_contig10915.617.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig10915.617.1
Unique Name	prot_S-dermatodea_contig10915.617.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	102

Homology

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: D7G0Y2_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y2_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 5.010e-39
Identity = 71/108 (65.74%), Postives = 85/108 (78.70%), Query Frame = 0

Query:    1 KAKAVAIIRESVAADDFVSPAVGVGRQDAPRFMDARIAGELVCGGSS-----SVVPWDRVNDDFCDCP-DGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            +A+AVA+IRE+ A D+F  PA GVGR+DA RF  AR AG+LVC  SS     + + WD++ND+FCDCP DGSDEPGTSAC+ G FECANRGHR +RLPSSRV DGVCD
Sbjct:   34 RARAVALIRENAAGDEFTPPASGVGRRDAARFAAARAAGKLVCTSSSGEEGSTEISWDKINDNFCDCPHDGSDEPGTSACSNGVFECANRGHRSVRLPSSRVGDGVCD 141

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: A0A6H5KIQ9_9PHAE (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ9_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.030e-38
Identity = 70/108 (64.81%), Postives = 84/108 (77.78%), Query Frame = 0

Query:    1 KAKAVAIIRESVAADDFVSPAVGVGRQDAPRFMDARIAGELVC-----GGSSSVVPWDRVNDDFCDCP-DGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            +A+AVA+IRE+ A D+F  PA GVGR+DA RF  AR AG+LVC      G S+ + WD++ND+FCDCP DGSDEPGTSAC+ G FECANRGH  +RLPSSRV DGVCD
Sbjct:   44 RARAVALIRENAAGDEFTPPASGVGRRDAARFTAARAAGKLVCTSSSEAGGSTEISWDKINDNFCDCPHDGSDEPGTSACSNGVFECANRGHWSVRLPSSRVGDGVCD 151

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: A0A1Y2B5J2_9FUNG (Glucosidase 2 subunit beta n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2B5J2_9FUNG)

HSP 1 Score: 99.8 bits (247), Expect = 1.440e-22
Identity = 46/80 (57.50%), Postives = 52/80 (65.00%), Query Frame = 0

Query:   23 GVGRQDAPRFMDARIAGELVCGGSSSVVPWDRVNDDFCDCPDGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            GV  + APR+  +       C   S  +P+  VNDDFCDC DGSDEPGTSAC  G F CAN GH P RLPS+RV DGVCD
Sbjct:   22 GVSDKLAPRYQPSA-TNTFTCLDGSQTIPYSSVNDDFCDCVDGSDEPGTSACPFGVFFCANNGHEPARLPSNRVNDGVCD 100

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: A0A0L0T3K5_ALLM3 (Glucosidase 2 subunit beta n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T3K5_ALLM3)

HSP 1 Score: 98.2 bits (243), Expect = 6.400e-22
Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = 0

Query:   36 RIAGELVCGGSSSVVPWDRVNDDFCDCPDGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            R  G+  C  +S  +P+  VNDD+CDCPDGSDEPGT+AC  G F CAN GHRP+ +PSSR+ DGVC+
Sbjct:   80 RTDGQWTCLDASKAIPFAAVNDDYCDCPDGSDEPGTAACNNGRFHCANVGHRPVDIPSSRINDGVCE 146

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: A0A1S8VWJ8_9FUNG (Glucosidase 2 subunit beta n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VWJ8_9FUNG)

HSP 1 Score: 98.2 bits (243), Expect = 6.720e-22
Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    6 AIIRESVAADDFVSPAVGVGRQDAPRFMDARIAGELVCGGSSSVVPWDRVNDDFCDCPDGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            A I  +VA +  + P VGV   +  R+   +      C   +  +P+D VNDD+CDC DGSDEPGTSAC  G F C N+GH    +PSSRV DGVCD
Sbjct:   20 AFITAAVATETKLGPTVGVSTANLYRYAQLKPGTLFNCFDGTRSIPFDSVNDDYCDCEDGSDEPGTSACDGGTFSCINKGHIESHIPSSRVNDGVCD 116

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: A0A4U7KVA0_9BASI (Glucosidase 2 subunit beta n=1 Tax=Sporisorium graminicola TaxID=280036 RepID=A0A4U7KVA0_9BASI)

HSP 1 Score: 97.1 bits (240), Expect = 2.400e-21
Identity = 47/95 (49.47%), Postives = 58/95 (61.05%), Query Frame = 0

Query:   11 SVAADDFVSPAVGVGRQDAPRFMDARIA-GEL--VCGGSSSVVPWDRVNDDFCDCPDGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            S +A    +P  GV   DA ++   + A G L   C   S  + W  +NDD+CDCPDGSDEPGTSAC   +F CAN GH P R+ SSRV DG+CD
Sbjct:   18 SASASSSTTPLRGVAPADASKYQPTKDAQGRLRWTCLDGSKELSWSAINDDYCDCPDGSDEPGTSACHNSSFYCANHGHIPARIRSSRVDDGICD 112

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: A0A0E9NRY5_SAICN (Glucosidase 2 subunit beta n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NRY5_SAICN)

HSP 1 Score: 96.3 bits (238), Expect = 4.360e-21
Identity = 41/64 (64.06%), Postives = 46/64 (71.88%), Query Frame = 0

Query:   39 GELVCGGSSSVVPWDRVNDDFCDCPDGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            G   C  +S  +P+ RVNDD+CDCPDGSDEPGTSAC  G F C NRGH P  L SSRV DG+CD
Sbjct:   44 GSFTCLDNSKTIPFSRVNDDYCDCPDGSDEPGTSACENGKFHCMNRGHVPGWLSSSRVGDGICD 107

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: A0A1Y1YS33_9FUNG (Glucosidase 2 subunit beta n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YS33_9FUNG)

HSP 1 Score: 95.9 bits (237), Expect = 5.670e-21
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 0

Query:   18 VSPAVGVGRQDAPRFMDARIAGELVCGGSSSVVPWDRVNDDFCDCPDGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            V P +GV   ++ + +   + G   C   S  +P+  VNDD+CDCPDGSDEPGTSAC    F C N GH PL + SSRV DGVCD
Sbjct:   26 VDPLLGV--PESKKALYTSVEGTFRCLDGSKTIPYHSVNDDYCDCPDGSDEPGTSACPNSTFHCKNLGHMPLEISSSRVNDGVCD 108

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: A0A316Z7Q2_9BASI (Glucosidase 2 subunit beta n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z7Q2_9BASI)

HSP 1 Score: 95.5 bits (236), Expect = 8.320e-21
Identity = 49/110 (44.55%), Postives = 58/110 (52.73%), Query Frame = 0

Query:    1 KAKAVAIIRESVAADDFVSPAV--------GVGRQDAPRFMDARIAGELVCGGSSSVVPWDRVNDDFCDCPDGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            KA+ VA +  +VAA      A         GV  +DA  +          C  S   +PW  VNDD+CDC DGSDEPGTSAC    F C N GH P  +PSSRV DG+CD
Sbjct:   16 KAQLVAFVSCAVAAASLAGSAAASSAGRPRGVAPEDAALYAQPAHGASWRCLTSGESIPWSAVNDDYCDCADGSDEPGTSACPNSRFYCINEGHLPAFIPSSRVNDGICD 125

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BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Match: A0A875RY02_EENNA (Uncharacterized protein n=1 Tax=Eeniella nana TaxID=13502 RepID=A0A875RY02_EENNA)

HSP 1 Score: 93.6 bits (231), Expect = 2.040e-20
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0

Query:   23 GVGRQDAPRFMDARIAGELVCGGSSSVVPWDRVNDDFCDCPDGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGVCD 102
            GV  ++ P ++  +         S+ V+ +DRVNDD+CDCPDGSDEPGTSAC+ G F CAN G +P  +PSS V DGVCD
Sbjct:   13 GVAPKNYPLYVPDKDGNFHCLNDSTIVISFDRVNDDYCDCPDGSDEPGTSACSNGKFYCANEGFKPHYIPSSWVNDGVCD 92

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig10915.617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0Y2_ECTSI	5.010e-39	65.74	Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sili...	[more]
A0A6H5KIQ9_9PHAE	2.030e-38	64.81	Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sp. ...	[more]
A0A1Y2B5J2_9FUNG	1.440e-22	57.50	Glucosidase 2 subunit beta n=1 Tax=Rhizoclosmatium...	[more]
A0A0L0T3K5_ALLM3	6.400e-22	59.70	Glucosidase 2 subunit beta n=1 Tax=Allomyces macro...	[more]
A0A1S8VWJ8_9FUNG	6.720e-22	47.42	Glucosidase 2 subunit beta n=1 Tax=Batrachochytriu...	[more]
A0A4U7KVA0_9BASI	2.400e-21	49.47	Glucosidase 2 subunit beta n=1 Tax=Sporisorium gra...	[more]
A0A0E9NRY5_SAICN	4.360e-21	64.06	Glucosidase 2 subunit beta n=2 Tax=Saitoella compl...	[more]
A0A1Y1YS33_9FUNG	5.670e-21	50.59	Glucosidase 2 subunit beta n=1 Tax=Basidiobolus me...	[more]
A0A316Z7Q2_9BASI	8.320e-21	44.55	Glucosidase 2 subunit beta n=1 Tax=Tilletiopsis wa...	[more]
A0A875RY02_EENNA	2.040e-20	52.50	Uncharacterized protein n=1 Tax=Eeniella nana TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028146	Glucosidase II beta subunit, N-terminal	PFAM	PF12999	PRKCSH-like	coord: 11..102 e-value: 2.2E-26 score: 92.7
IPR026874	Glucosidase 2 subunit beta	PANTHER	PTHR12630:SF1	GLUCOSIDASE 2 SUBUNIT BETA	coord: 18..102
IPR039794	Glucosidase II beta subunit-like	PANTHER	PTHR12630	N-LINKED OLIGOSACCHARIDE PROCESSING	coord: 18..102
IPR036055	LDL receptor-like superfamily	SUPERFAMILY	57424	LDL receptor-like module	coord: 39..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig10915	contig	S-dermatodea_contig10915:6146..6929 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig10915.617.1	mRNA_S-dermatodea_contig10915.617.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig10915 6146..6929 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig10915.617.1 ID=prot_S-dermatodea_contig10915.617.1|Name=mRNA_S-dermatodea_contig10915.617.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=102bp
KAKAVAIIRESVAADDFVSPAVGVGRQDAPRFMDARIAGELVCGGSSSVV
PWDRVNDDFCDCPDGSDEPGTSACAKGAFECANRGHRPLRLPSSRVRDGV
CD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028146	PRKCSH_N
IPR026874	Glucosidase_2_bsu
IPR039794	Gtb1-like
IPR036055	LDL_receptor-like_sf