prot_S-dermatodea_contig1088.589.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1088.589.1
Unique Nameprot_S-dermatodea_contig1088.589.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length226
Homology
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BLAST of mRNA_S-dermatodea_contig1088.589.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 2.630e-20
Identity = 41/55 (74.55%), Postives = 50/55 (90.91%), Query Frame = 0 
Query:    1 MQRTLLQKRVGEFDGREGEDVIPHWVTACVLHGDFRVKDQPKLSFFLAPWMPPEQ 55
            +QRTLLQKRVGEFDGREG+D IP+WV ACVLHG+F  K+Q K++FFLAPW+PPE+
Sbjct: 1005 IQRTLLQKRVGEFDGREGQDAIPNWVMACVLHGEFHTKEQDKMAFFLAPWIPPER 1059
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1088.589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCV2_9PHAE2.630e-2074.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021772WDR48/Bun107PFAMPF11816DUF3337coord: 7..210
e-value: 2.3E-18
score: 66.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1088contigS-dermatodea_contig1088:19415..21890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1088.589.1mRNA_S-dermatodea_contig1088.589.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1088 19373..21893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1088.589.1 ID=prot_S-dermatodea_contig1088.589.1|Name=mRNA_S-dermatodea_contig1088.589.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=226bp
MQRTLLQKRVGEFDGREGEDVIPHWVTACVLHGDFRVKDQPKLSFFLAPW
MPPEQAPPPSTPRQQQQQQQQSASSSSLGKRGGGADAASASRGGGAAGGG
KAGLAGGSASGAHPASQRFTAPAQMLVSKVMAYVLSHDELGQHLESTGPE
GNEGGVRTEGGEGVAPREYPEDIVEVLCGDRVLEPHLYVGAIKQYIWNSN
AGGTLFLHYRSRHRSTGKGQRPTGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021772WDR48/Bun107