prot_S-dermatodea_contig10877.582.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10877.582.1
Unique Nameprot_S-dermatodea_contig10877.582.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length186
Homology
BLAST of mRNA_S-dermatodea_contig10877.582.1 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 3.010e-47
Identity = 99/200 (49.50%), Postives = 123/200 (61.50%), Query Frame = 0
Query:    2 QVKEISYAFPTDHEDTGCLSVVCRLTLDVLGFPACTSSSVTSRVGISNAQRGENPLAFRSDSFSQP-AVTGEPAA-----TFTVSLRDSGAADFLVPERRYEESVRREWRIGERVVTEYKEETXXXXXXXXXXXXXXGCGLTSFYGVVSKIARNQSGS---------EMWANSPWDCLSIKWDYDGTTTSLGPWEPRPVS 186
            QVKE+S+ FP D E+ G  SVVCRL+L+VLGFP   SSSV +R  ++ A RG+NPLA+R DSF+ P A  G  +A     TF+VSLRD G ADFLV ERRY ESV R WR  ERV+ E+KE                   L  ++GV+ ++    +G            W NSPWDCLSI+WD D T +SLGPWEPRPV+
Sbjct: 1347 QVKEMSFVFPKDTEEVGNHSVVCRLSLEVLGFPVRVSSSVVARTALNQASRGDNPLAYREDSFAPPPAEDGGGSAEAHSQTFSVSLRDCGEADFLVSERRYNESVGRNWRPSERVMMEWKEGEDGEEGEGV---------LKPYFGVMVRLGMAGAGGAGGAQSSSRNDWPNSPWDCLSIRWDLDNTISSLGPWEPRPVT 1537          
BLAST of mRNA_S-dermatodea_contig10877.582.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.450e-46
Identity = 98/199 (49.25%), Postives = 120/199 (60.30%), Query Frame = 0
Query:    3 VKEISYAFPTDHEDTGCLSVVCRLTLDVLGFPACTSSSVTSRVGISNAQRGENPLAFRSDSFSQPAVT--GEPAA----TFTVSLRDSGAADFLVPERRYEESVRREWRIGERVVTEYKEETXXXXXXXXXXXXXXGCGLTSFYGVVSKIARNQSGS---------EMWANSPWDCLSIKWDYDGTTTSLGPWEPRPVS 186
            VKE+S+ FP D E+ G  SVVCRL+L+VLGFP   SSSV +R  ++ A RG+NPLA+R DSF+ P     G+ A     TF+VSLRD G ADFLV ERRY +SV R WR  ERV+ E+KE                   L  ++G V KI    +G            W NSPWDCLSI+WD D T +SLGPWEPRPV+
Sbjct: 1307 VKEMSFVFPKDTEEVGNHSVVCRLSLEVLGFPVRVSSSVVTRTALNQASRGDNPLAYREDSFAPPPTEEGGDSAEAHSQTFSVSLRDCGEADFLVSERRYNKSVGRNWRPSERVMMEWKEGEDGEDGEGV---------LKPYFGAVVKIGMAGAGGGGGTQPLSRNDWPNSPWDCLSIRWDLDNTISSLGPWEPRPVT 1496          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10877.582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEP1_ECTSI3.010e-4749.50WD-repeat protein, putative n=1 Tax=Ectocarpus sil... [more]
A0A6H5KTA2_9PHAE1.450e-4649.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10877contigS-dermatodea_contig10877:152..709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10877.582.1mRNA_S-dermatodea_contig10877.582.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10877 152..709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10877.582.1 ID=prot_S-dermatodea_contig10877.582.1|Name=mRNA_S-dermatodea_contig10877.582.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=186bp
MQVKEISYAFPTDHEDTGCLSVVCRLTLDVLGFPACTSSSVTSRVGISNA
QRGENPLAFRSDSFSQPAVTGEPAATFTVSLRDSGAADFLVPERRYEESV
RREWRIGERVVTEYKEETEEDEEGGGAAAAGGGCGLTSFYGVVSKIARNQ
SGSEMWANSPWDCLSIKWDYDGTTTSLGPWEPRPVS
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