mRNA_S-dermatodea_contig10861.576.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10861.576.1
Unique NamemRNA_S-dermatodea_contig10861.576.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: D8LJS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS2_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 6.490e-118
Identity = 179/237 (75.53%), Postives = 189/237 (79.75%), Query Frame = 1
Query:    1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDH---------------------------------HRLLALKKGIESEISSLGGHLGLSRLIEGLDRQL 612
            VDDIEDNSKLRRGVPVAHSIYGV STINTANYVYFQA    LERTHALGNSRALE+FV  QLNLHRGQGRDILWRD+NRCPTEEEYESMVLDKTGGLFRLAV LMQAFS+D+R+YTPLL+QLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHC+RAKP DH                                 HRL++LK+ I   I  LGGHLGLSRLIEGLDRQL
Sbjct:   74 VDDIEDNSKLRRGVPVAHSIYGVASTINTANYVYFQA----LERTHALGNSRALETFVHEQLNLHRGQGRDILWRDSNRCPTEEEYESMVLDKTGGLFRLAVGLMQAFSQDQRNYTPLLDQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCVRAKPNDHRLLNILKQRTEDVDVKKHAVVWMKQAGSFVYTRHRLVSLKESIAEGIQLLGGHLGLSRLIEGLDRQL 306          
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7S2S248_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S248_9STRA)

HSP 1 Score: 269 bits (688), Expect = 9.100e-87
Identity = 144/237 (60.76%), Postives = 162/237 (68.35%), Query Frame = 1
Query:    1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIES---------------------------------EISSLGGHLGLSRLIEGLDRQL 612
            VDDIEDNS+LRRG+PVAH+IYG+PSTIN ANYVYF     ALER H L N +A+  FV   LNLHRGQG+DILWRDT  CPTE+EY  MVLDKTGGLFRLAV LM AFSE+   +TPL+++LALYFQIRDDLINL+S EYM  KSFCEDLTEGKFSFPIIHCI ++P D   L  LKK  ES                                 EI SLGGH  L  LIE LD+Q+
Sbjct:   79 VDDIEDNSQLRRGIPVAHAIYGIPSTINCANYVYF----LALERCHQLRNPKAMNIFVGELLNLHRGQGQDILWRDTLSCPTEDEYRRMVLDKTGGLFRLAVGLMGAFSENGTDFTPLVDKLALYFQIRDDLINLASTEYMTSKSFCEDLTEGKFSFPIIHCIHSRPDDSQLLNILKKKTESIAIKRYAVDVMEKAGSFAHTRKELRSLKNDVMAEIESLGGHAELVALIEYLDKQV 311          
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: R1BLF2_EMIHU (Farnesyltranstransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BLF2_EMIHU)

HSP 1 Score: 273 bits (698), Expect = 5.900e-86
Identity = 140/204 (68.63%), Postives = 156/204 (76.47%), Query Frame = 1
Query:    1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIESEISSLGGHLGLSRLIEGLDRQL 612
            VDDIEDNS LRRG+PVAHSIYGVP+TIN+ANYVYF     ALER H LGN  A+  FV   LNLHRGQG+DILWRD  RCPTEEEY  MVLDKTGGLFRLAV LMQAFS     +TPL+NQLALYFQIRDDLINLSS +YM  KS+ EDLTEGKFSFPIIHCI ++P    R    +K +  E+  LGGH  L  L+E LDRQ+
Sbjct:   65 VDDIEDNSTLRRGIPVAHSIYGVPTTINSANYVYF----LALERCHQLGNPAAMNIFVHELLNLHRGQGQDILWRDNLRCPTEEEYRRMVLDKTGGLFRLAVGLMQAFSASEVDFTPLVNQLALYFQIRDDLINLSSDDYMASKSYAEDLTEGKFSFPIIHCITSRPT---RRRCQQKEVLLEVERLGGHEELVSLLEYLDRQV 261          
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7S3S468_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S468_EMIHU)

HSP 1 Score: 257 bits (656), Expect = 9.150e-82
Identity = 126/167 (75.45%), Postives = 137/167 (82.04%), Query Frame = 1
Query:    1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKP 501
            VDDIEDNS LRRG+PVAHSIYGVP+TIN+ANYVYF     ALER H LGN  A+  FV   LNLHRGQG+DILWRD  RCPTEEEY  MVLDKTGGLFRLAV LMQAFS     +TPL+NQLALYFQIRDDLINLSS +YM  KS+ EDLTEGKFSFPIIHCI ++P
Sbjct:   74 VDDIEDNSTLRRGIPVAHSIYGVPTTINSANYVYF----LALERCHQLGNPAAMNIFVHELLNLHRGQGQDILWRDNLRCPTEEEYRRMVLDKTGGLFRLAVGLMQAFSASEVDFTPLVNQLALYFQIRDDLINLSSDDYMASKSYAEDLTEGKFSFPIIHCITSRP 236          
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7S4JG93_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JG93_9STRA)

HSP 1 Score: 251 bits (640), Expect = 4.330e-80
Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 1
Query:    1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRS--YTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKK 534
            VDDIEDNSKLRRGVPVAHSI+GV + INTANY+YFQA    L++ H L N  A++ FV+  LNLHRGQG DI+WRDT RCPTE+EY +MV+DKTGGLFRLAV LM+AF+ +++S  +TPL+N L LYFQIRDDLINL+  EY K KSFCEDLTEGKFSFPIIHC+R    D   L  LK+
Sbjct:   66 VDDIEDNSKLRRGVPVAHSIFGVATVINTANYIYFQA----LQKCHQLNNQEAMDVFVKEMLNLHRGQGHDIMWRDTTRCPTEQEYCNMVVDKTGGLFRLAVGLMKAFATEQKSADFTPLVNNLGLYFQIRDDLINLADEEYFKSKSFCEDLTEGKFSFPIIHCVRNDEVDTRLLSILKQ 241          
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7R9WV59_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WV59_9STRA)

HSP 1 Score: 244 bits (622), Expect = 3.700e-77
Identity = 122/183 (66.67%), Postives = 139/183 (75.96%), Query Frame = 1
Query:    1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRS--YTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIE 543
            +DDIEDNSKLRRG+PVAHSI+G+P+ IN ANY YF     ALE+ HAL N +A+  FV   LNLHRGQG DILWRD  RCPTEE+Y  MV DKTGGLFRLAV LMQAF+ D +   ++PL++ LALYFQIRDD INL+  EYMK KSFCED TEGKFSFPIIH IR+ P D   L  LKK  E
Sbjct:   94 IDDIEDNSKLRRGIPVAHSIFGIPTVINAANYAYF----LALEKCHALRNPQAMNVFVGELLNLHRGQGHDILWRDDVRCPTEEQYLEMVKDKTGGLFRLAVGLMQAFATDMKDSDFSPLVDNLALYFQIRDDYINLADDEYMKSKSFCEDFTEGKFSFPIIHSIRSNPDDTRVLSILKKRTE 272          
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7S1ZPT9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPT9_TRICV)

HSP 1 Score: 243 bits (620), Expect = 7.420e-77
Identity = 118/180 (65.56%), Postives = 142/180 (78.89%), Query Frame = 1
Query:    1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRS--YTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKK 534
            +DDIEDNSKLRRG PVAH I+G+   +NTANYVYF     ALE+ HA+GN +A++ FV   LNLHRGQG DI+WRD N+CP EEEY +MV+DKTGGLFRLAV LMQAF+ + +   ++PL+N L LYFQIRDDLINL+  EY K KSFCEDLTEGKFSFPIIHC+R K +   RLL++ K
Sbjct:   77 IDDIEDNSKLRRGNPVAHHIFGIAPVLNTANYVYF----LALEKCHAMGNPQAMQVFVSEILNLHRGQGHDIMWRDNNQCPAEEEYCNMVIDKTGGLFRLAVGLMQAFATNHKDTDFSPLVNNLGLYFQIRDDLINLADEEYFKSKSFCEDLTEGKFSFPIIHCVR-KDKSDKRLLSILK 251          
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: F0Y476_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y476_AURAN)

HSP 1 Score: 242 bits (617), Expect = 1.120e-76
Identity = 130/238 (54.62%), Postives = 157/238 (65.97%), Query Frame = 1
Query:    1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRS-YTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIES---------------------------------EISSLGGHLGLSRLIEGLDRQL 612
            VDDIED S+LRRG PVAH+I+GVPST+NTANYVYF     ALE  H L N  AL  FV+  LNLHRGQG+DILWRD+ RCPTE EY +MVLDKTGGLFRLAV +M AFS+ R+  +  L++ LALYFQIRDDL+NL S +YM+ KS+CEDLTEGKFSFPI+H + A P D   L  LK+  E+                                 EI+ LGGH  L+ L++ LD Q+
Sbjct:   62 VDDIEDGSQLRRGKPVAHAIFGVPSTLNTANYVYF----IALEECHRLDNGEALAVFVEELLNLHRGQGQDILWRDSCRCPTEAEYTTMVLDKTGGLFRLAVGMMAAFSDRRKGEFRKLVDLLALYFQIRDDLVNLRSDDYMRSKSYCEDLTEGKFSFPILHAVHAAPGDTRLLNILKQRTENPDVKKHAVEHMASLGSFAYTRTALAKLKADIGAEIALLGGHARLAALMDKLDAQI 295          
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A1V9Z5R1_9STRA (Geranylgeranyl pyrophosphate synthetase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5R1_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.190e-76
Identity = 113/178 (63.48%), Postives = 142/178 (79.78%), Query Frame = 1
Query:    1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKK 534
            +DDIEDNS+LRRG PVAHSI+GVPSTIN AN+V+F     ALE+ + LG+ +A++ ++   +NLHRGQG+DILWRDT  CPTEEEY++MV++KTGGLFRLAV LMQAFS   + + PL+N+L LYFQ+RDD INL   +YM+ KSFCEDLTEGKFSFP+I+ IR  P DH  L  LK+
Sbjct:   59 IDDIEDNSELRRGQPVAHSIFGVPSTINCANFVFF----LALEQCNKLGSQKAMDIYISEMINLHRGQGQDILWRDTTTCPTEEEYKAMVINKTGGLFRLAVGLMQAFSTSTKDFIPLVNKLGLYFQVRDDYINLIDTKYMEHKSFCEDLTEGKFSFPLIYGIRKDPNDHRLLSILKQ 232          
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A0L0FXB4_9EUKA (Geranylgeranyl pyrophosphate synthase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FXB4_9EUKA)

HSP 1 Score: 239 bits (610), Expect = 1.690e-76
Identity = 113/181 (62.43%), Postives = 136/181 (75.14%), Query Frame = 1
Query:    4 DDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIES 546
            DDIEDNS LRRG+PVAH IYGVP+TIN+ANYVYFQA    LER   + N  AL+ F +  L LHRGQG+DI WRD+N+CP  ++Y  MV+ KTGGLFRL+V LMQ FS+D+R Y PLLN + LYFQIRDD +NL+S EYM  KSFCEDLTEGKFS+PI+H +   P +   L  LK+  ES
Sbjct:   19 DDIEDNSNLRRGIPVAHIIYGVPATINSANYVYFQA----LERITEMDNMEALQIFSKEMLELHRGQGKDIYWRDSNKCPQFDDYNEMVIQKTGGLFRLSVKLMQVFSQDQRDYVPLLNTMGLYFQIRDDYVNLTSTEYMSNKSFCEDLTEGKFSYPIVHSVLKNPNERQLLNILKQRTES 195          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJS2_ECTSI6.490e-11875.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2S248_9STRA9.100e-8760.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
R1BLF2_EMIHU5.900e-8668.63Farnesyltranstransferase n=1 Tax=Emiliania huxleyi... [more]
A0A7S3S468_EMIHU9.150e-8275.45Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
A0A7S4JG93_9STRA4.330e-8067.78Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9WV59_9STRA3.700e-7766.67Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A7S1ZPT9_TRICV7.420e-7765.56Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
F0Y476_AURAN1.120e-7654.62Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1V9Z5R1_9STRA1.190e-7663.48Geranylgeranyl pyrophosphate synthetase n=1 Tax=Th... [more]
A0A0L0FXB4_9EUKA1.690e-7662.43Geranylgeranyl pyrophosphate synthase n=1 Tax=Spha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10861contigS-dermatodea_contig10861:184..2002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.5
Seed ortholog evalue1.7e-92
Seed eggNOG ortholog2880.D8LJS2
KEGG rclassRC00279
KEGG koko:K00804
KEGG ReactionR01658,R02003,R02061
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00367
GOsGO:0003674,GO:0003824,GO:0004311,GO:0004337,GO:0004659,GO:0016740,GO:0016765
EggNOG free text desc.geranylgeranyl diphosphate biosynthetic process
EggNOG OGsCOG0142@1,KOG0777@2759
EC2.5.1.1,2.5.1.10,2.5.1.29
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006
Hectar predicted targeting categoryother localisation
Exons5
Model size612
Cds size612
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10861.576.1prot_S-dermatodea_contig10861.576.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10861 184..2002 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924177.2115588-CDS-S-dermatodea_contig10861:183..3031622924177.2115588-CDS-S-dermatodea_contig10861:183..303Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 184..303 +
1694079070.835306-CDS-S-dermatodea_contig10861:183..3031694079070.835306-CDS-S-dermatodea_contig10861:183..303Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 184..303 +
1622924177.2215958-CDS-S-dermatodea_contig10861:485..6421622924177.2215958-CDS-S-dermatodea_contig10861:485..642Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 486..642 +
1694079070.8481548-CDS-S-dermatodea_contig10861:485..6421694079070.8481548-CDS-S-dermatodea_contig10861:485..642Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 486..642 +
1622924177.229607-CDS-S-dermatodea_contig10861:993..11691622924177.229607-CDS-S-dermatodea_contig10861:993..1169Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 994..1169 +
1694079070.8577337-CDS-S-dermatodea_contig10861:993..11691694079070.8577337-CDS-S-dermatodea_contig10861:993..1169Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 994..1169 +
1622924177.24222-CDS-S-dermatodea_contig10861:1502..15601622924177.24222-CDS-S-dermatodea_contig10861:1502..1560Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 1503..1560 +
1694079070.8674717-CDS-S-dermatodea_contig10861:1502..15601694079070.8674717-CDS-S-dermatodea_contig10861:1502..1560Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 1503..1560 +
1622924177.2516413-CDS-S-dermatodea_contig10861:1901..20021622924177.2516413-CDS-S-dermatodea_contig10861:1901..2002Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 1902..2002 +
1694079070.8782425-CDS-S-dermatodea_contig10861:1901..20021694079070.8782425-CDS-S-dermatodea_contig10861:1901..2002Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10861 1902..2002 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10861.576.1

>prot_S-dermatodea_contig10861.576.1 ID=prot_S-dermatodea_contig10861.576.1|Name=mRNA_S-dermatodea_contig10861.576.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=204bp
VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGN
SRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRL
AVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDL
TEGKFSFPIIHCIRAKPRDHHRLLALKKGIESEISSLGGHLGLSRLIEGL
DRQL
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mRNA from alignment at S-dermatodea_contig10861:184..2002+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10861.576.1 ID=mRNA_S-dermatodea_contig10861.576.1|Name=mRNA_S-dermatodea_contig10861.576.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1819bp|location=Sequence derived from alignment at S-dermatodea_contig10861:184..2002+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTGGACGACATAGAAGACAACTCCAAGCTACGAAGAGGCGTGCCGGTTGC GCATTCCATCTATGGGGTGCCCTCCACCATCAACACCGCCAACTACGTAT ACTTTCAGGCGAGCTGTACTGTAGAAGCGATATATTGTTGCGCTCCGGTC ATTACAGTGCCGGTTAGTCGTTCGCGCTGCTGCTTCTTGGACTCCGTGCC GCCCCACGCTCATCGCGGTCGGGTCGAGCTACTAAGCTAGCGGAAAATCC TGCCCCCTCTTATCTCCCGGTTTCCTCTCTGTTTGCAATCTGCCGCTTGC AGGCACTGGAGCGGACGCACGCCCTGGGAAATTCGCGAGCATTGGAGAGC TTTGTTCAGGCGCAACTTAACCTCCATCGCGGTCAGGGAAGGGACATACT CTGGCGGGACACTAACCGGTGCCCGACGGAAGAGGAGTACGAGTCTATGG TTCTCGACAGTGAGTGCACAAACTCTTCACCCCCGTCGCGCATTGTGTTG GGTCCAAGATAACGGCGTGTCTTGGGTGCAGCATGCAAGCTTCTCGAGAC CCGTGAGCTGTTGCAATATGCTTTTGCTGCTGAACGCTGTTGGTGTTGTT TTTCCATGTTGTATTTTGCCCTTTTGAGCTTAATCGGACGCGTAGGTGCT GGAGCGTATGTGGCACGGATTTGATGTTTAGCGTTCGCCCTGACGGCATT TATAGTCTTGCTCTCATTGGTTCCCTGCCCCCCCCCCCCCTCCCCCACCT CAAAGCGCATTCACGCTGTATCCCCGCGCTTTGCCCCTGCCTATGCATAA CTTGGCGCAGAGACGGGGGGGTTATTTCGGCTAGCGGTGGATTTGATGCA GGCCTTCAGCGAAGACCGACGCAGCTACACCCCGTTGCTGAACCAGCTTG CGCTATATTTTCAGATCAGGGACGACCTGATTAACCTCTCCAGTCCGGAG TACATGAAGGGGAAGAGTTTCTGCGAGGATTTGACGGTACGCTTGATGTT GCGATACTTGAATATTTTTGATGGATCGATGACTGAGTCGTGTTTGTCTC GCAGCGGTCGCATCCTATCTGCTTGTGTATGACTTAACAGTGCAAGTATG AGACGATACATAAAGTACAGAGTTGGTGGTCCAATCGATCCCTAAGGTCC GCTTGGCGTCGTGAGTCAATCCTGCTTAATGGGCGAGCGTTTTATTAAAT AAATCTGCAAGGCGCCCTCGGTGTTTCTGGTGCCAGATCCAGCACCATCT TGCGACGGCTCTCCGACCCGCTCCCGGTACCACCGTCATCCTCGCCCCTC ACGCCGCATCTTGTAAAAGGAAGGGAAGTTTTCCTTCCCGATCATCCACT GTATCAGGGCAAAACCACGGGACCACCGTCTGCTGAACATCCTCAAGCAG AGAACTGAAGACGTGGACGTCAAGAAGCACGCTCTGGTGTGGATGAAGCG AGCGGTGAGTGTAGGTGATCCTTCAAATCTCTTGGCTGTCGCCGAAACGG CAACAAGCACAGAGTCGTTGCGGTCGGTCGGTGCTCGTTAGACGAAAACT TGGGGCAGGGTCAATCAACACGTGAAATCTATACGCACGATACCCTCTTC TGCGATTATGACGTGGTGCGGCTAAGGCAGCATCCCTCGCTCTCGACGCG TGCCCCCCGTTTCACCCCCCACCCTGGATTTCTTCTTATTTTTCAGGATT CATTGGTGTACACGAGAGATCGTCTTCTGGCTCTCAAGAAAGGTATCGAA TCCGAGATTTCCTCTCTCGGCGGACATCTCGGTCTCAGCCGTTTGATCGA GGGCTTGGATAGGCAGCTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10861:184..2002+

>mRNA_S-dermatodea_contig10861.576.1 ID=mRNA_S-dermatodea_contig10861.576.1|Name=mRNA_S-dermatodea_contig10861.576.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at S-dermatodea_contig10861:184..2002+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTGGACGACATAGAAGACAACTCCAAGCTACGAAGAGGCGTGCCGGTTGC
GCATTCCATCTATGGGGTGCCCTCCACCATCAACACCGCCAACTACGTAT
ACTTTCAGGCGAGCTGTACTGTGGACGACATAGAAGACAACTCCAAGCTA
CGAAGAGGCGTGCCGGTTGCGCATTCCATCTATGGGGTGCCCTCCACCAT
CAACACCGCCAACTACGTATACTTTCAGGCGAGCTGTACTGCACTGGAGC
GGACGCACGCCCTGGGAAATTCGCGAGCATTGGAGAGCTTTGTTCAGGCG
CAACTTAACCTCCATCGCGGTCAGGGAAGGGACATACTCTGGCGGGACAC
TAACCGGTGCCCGACGGAAGAGGAGTACGAGTCTATGGTTCTCGACAGCA
CTGGAGCGGACGCACGCCCTGGGAAATTCGCGAGCATTGGAGAGCTTTGT
TCAGGCGCAACTTAACCTCCATCGCGGTCAGGGAAGGGACATACTCTGGC
GGGACACTAACCGGTGCCCGACGGAAGAGGAGTACGAGTCTATGGTTCTC
GACAAGACGGGGGGGTTATTTCGGCTAGCGGTGGATTTGATGCAGGCCTT
CAGCGAAGACCGACGCAGCTACACCCCGTTGCTGAACCAGCTTGCGCTAT
ATTTTCAGATCAGGGACGACCTGATTAACCTCTCCAGTCCGGAGTACATG
AAGGGGAAGAGTTTCTGCGAGGATTTGACGAGACGGGGGGGTTATTTCGG
CTAGCGGTGGATTTGATGCAGGCCTTCAGCGAAGACCGACGCAGCTACAC
CCCGTTGCTGAACCAGCTTGCGCTATATTTTCAGATCAGGGACGACCTGA
TTAACCTCTCCAGTCCGGAGTACATGAAGGGGAAGAGTTTCTGCGAGGAT
TTGACGGAAGGGAAGTTTTCCTTCCCGATCATCCACTGTATCAGGGCAAA
ACCACGGGACCACCGAAGGGAAGTTTTCCTTCCCGATCATCCACTGTATC
AGGGCAAAACCACGGGACCACCATCGTCTTCTGGCTCTCAAGAAAGGTAT
CGAATCCGAGATTTCCTCTCTCGGCGGACATCTCGGTCTCAGCCGTTTGA
TCGAGGGCTTGGATAGGCAGCTGATCGTCTTCTGGCTCTCAAGAAAGGTA
TCGAATCCGAGATTTCCTCTCTCGGCGGACATCTCGGTCTCAGCCGTTTG
ATCGAGGGCTTGGATAGGCAGCTG
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