mRNA_S-dermatodea_contig10861.576.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: D8LJS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS2_ECTSI) HSP 1 Score: 347 bits (890), Expect = 6.490e-118 Identity = 179/237 (75.53%), Postives = 189/237 (79.75%), Query Frame = 1
Query: 1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDH---------------------------------HRLLALKKGIESEISSLGGHLGLSRLIEGLDRQL 612
VDDIEDNSKLRRGVPVAHSIYGV STINTANYVYFQA LERTHALGNSRALE+FV QLNLHRGQGRDILWRD+NRCPTEEEYESMVLDKTGGLFRLAV LMQAFS+D+R+YTPLL+QLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHC+RAKP DH HRL++LK+ I I LGGHLGLSRLIEGLDRQL
Sbjct: 74 VDDIEDNSKLRRGVPVAHSIYGVASTINTANYVYFQA----LERTHALGNSRALETFVHEQLNLHRGQGRDILWRDSNRCPTEEEYESMVLDKTGGLFRLAVGLMQAFSQDQRNYTPLLDQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCVRAKPNDHRLLNILKQRTEDVDVKKHAVVWMKQAGSFVYTRHRLVSLKESIAEGIQLLGGHLGLSRLIEGLDRQL 306
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7S2S248_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S248_9STRA) HSP 1 Score: 269 bits (688), Expect = 9.100e-87 Identity = 144/237 (60.76%), Postives = 162/237 (68.35%), Query Frame = 1
Query: 1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIES---------------------------------EISSLGGHLGLSRLIEGLDRQL 612
VDDIEDNS+LRRG+PVAH+IYG+PSTIN ANYVYF ALER H L N +A+ FV LNLHRGQG+DILWRDT CPTE+EY MVLDKTGGLFRLAV LM AFSE+ +TPL+++LALYFQIRDDLINL+S EYM KSFCEDLTEGKFSFPIIHCI ++P D L LKK ES EI SLGGH L LIE LD+Q+
Sbjct: 79 VDDIEDNSQLRRGIPVAHAIYGIPSTINCANYVYF----LALERCHQLRNPKAMNIFVGELLNLHRGQGQDILWRDTLSCPTEDEYRRMVLDKTGGLFRLAVGLMGAFSENGTDFTPLVDKLALYFQIRDDLINLASTEYMTSKSFCEDLTEGKFSFPIIHCIHSRPDDSQLLNILKKKTESIAIKRYAVDVMEKAGSFAHTRKELRSLKNDVMAEIESLGGHAELVALIEYLDKQV 311
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: R1BLF2_EMIHU (Farnesyltranstransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BLF2_EMIHU) HSP 1 Score: 273 bits (698), Expect = 5.900e-86 Identity = 140/204 (68.63%), Postives = 156/204 (76.47%), Query Frame = 1
Query: 1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIESEISSLGGHLGLSRLIEGLDRQL 612
VDDIEDNS LRRG+PVAHSIYGVP+TIN+ANYVYF ALER H LGN A+ FV LNLHRGQG+DILWRD RCPTEEEY MVLDKTGGLFRLAV LMQAFS +TPL+NQLALYFQIRDDLINLSS +YM KS+ EDLTEGKFSFPIIHCI ++P R +K + E+ LGGH L L+E LDRQ+
Sbjct: 65 VDDIEDNSTLRRGIPVAHSIYGVPTTINSANYVYF----LALERCHQLGNPAAMNIFVHELLNLHRGQGQDILWRDNLRCPTEEEYRRMVLDKTGGLFRLAVGLMQAFSASEVDFTPLVNQLALYFQIRDDLINLSSDDYMASKSYAEDLTEGKFSFPIIHCITSRPT---RRRCQQKEVLLEVERLGGHEELVSLLEYLDRQV 261
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7S3S468_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S468_EMIHU) HSP 1 Score: 257 bits (656), Expect = 9.150e-82 Identity = 126/167 (75.45%), Postives = 137/167 (82.04%), Query Frame = 1
Query: 1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKP 501
VDDIEDNS LRRG+PVAHSIYGVP+TIN+ANYVYF ALER H LGN A+ FV LNLHRGQG+DILWRD RCPTEEEY MVLDKTGGLFRLAV LMQAFS +TPL+NQLALYFQIRDDLINLSS +YM KS+ EDLTEGKFSFPIIHCI ++P
Sbjct: 74 VDDIEDNSTLRRGIPVAHSIYGVPTTINSANYVYF----LALERCHQLGNPAAMNIFVHELLNLHRGQGQDILWRDNLRCPTEEEYRRMVLDKTGGLFRLAVGLMQAFSASEVDFTPLVNQLALYFQIRDDLINLSSDDYMASKSYAEDLTEGKFSFPIIHCITSRP 236
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7S4JG93_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JG93_9STRA) HSP 1 Score: 251 bits (640), Expect = 4.330e-80 Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 1
Query: 1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRS--YTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKK 534
VDDIEDNSKLRRGVPVAHSI+GV + INTANY+YFQA L++ H L N A++ FV+ LNLHRGQG DI+WRDT RCPTE+EY +MV+DKTGGLFRLAV LM+AF+ +++S +TPL+N L LYFQIRDDLINL+ EY K KSFCEDLTEGKFSFPIIHC+R D L LK+
Sbjct: 66 VDDIEDNSKLRRGVPVAHSIFGVATVINTANYIYFQA----LQKCHQLNNQEAMDVFVKEMLNLHRGQGHDIMWRDTTRCPTEQEYCNMVVDKTGGLFRLAVGLMKAFATEQKSADFTPLVNNLGLYFQIRDDLINLADEEYFKSKSFCEDLTEGKFSFPIIHCVRNDEVDTRLLSILKQ 241
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7R9WV59_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WV59_9STRA) HSP 1 Score: 244 bits (622), Expect = 3.700e-77 Identity = 122/183 (66.67%), Postives = 139/183 (75.96%), Query Frame = 1
Query: 1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRS--YTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIE 543
+DDIEDNSKLRRG+PVAHSI+G+P+ IN ANY YF ALE+ HAL N +A+ FV LNLHRGQG DILWRD RCPTEE+Y MV DKTGGLFRLAV LMQAF+ D + ++PL++ LALYFQIRDD INL+ EYMK KSFCED TEGKFSFPIIH IR+ P D L LKK E
Sbjct: 94 IDDIEDNSKLRRGIPVAHSIFGIPTVINAANYAYF----LALEKCHALRNPQAMNVFVGELLNLHRGQGHDILWRDDVRCPTEEQYLEMVKDKTGGLFRLAVGLMQAFATDMKDSDFSPLVDNLALYFQIRDDYINLADDEYMKSKSFCEDFTEGKFSFPIIHSIRSNPDDTRVLSILKKRTE 272
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A7S1ZPT9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPT9_TRICV) HSP 1 Score: 243 bits (620), Expect = 7.420e-77 Identity = 118/180 (65.56%), Postives = 142/180 (78.89%), Query Frame = 1
Query: 1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRS--YTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKK 534
+DDIEDNSKLRRG PVAH I+G+ +NTANYVYF ALE+ HA+GN +A++ FV LNLHRGQG DI+WRD N+CP EEEY +MV+DKTGGLFRLAV LMQAF+ + + ++PL+N L LYFQIRDDLINL+ EY K KSFCEDLTEGKFSFPIIHC+R K + RLL++ K
Sbjct: 77 IDDIEDNSKLRRGNPVAHHIFGIAPVLNTANYVYF----LALEKCHAMGNPQAMQVFVSEILNLHRGQGHDIMWRDNNQCPAEEEYCNMVIDKTGGLFRLAVGLMQAFATNHKDTDFSPLVNNLGLYFQIRDDLINLADEEYFKSKSFCEDLTEGKFSFPIIHCVR-KDKSDKRLLSILK 251
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: F0Y476_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y476_AURAN) HSP 1 Score: 242 bits (617), Expect = 1.120e-76 Identity = 130/238 (54.62%), Postives = 157/238 (65.97%), Query Frame = 1
Query: 1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRS-YTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIES---------------------------------EISSLGGHLGLSRLIEGLDRQL 612
VDDIED S+LRRG PVAH+I+GVPST+NTANYVYF ALE H L N AL FV+ LNLHRGQG+DILWRD+ RCPTE EY +MVLDKTGGLFRLAV +M AFS+ R+ + L++ LALYFQIRDDL+NL S +YM+ KS+CEDLTEGKFSFPI+H + A P D L LK+ E+ EI+ LGGH L+ L++ LD Q+
Sbjct: 62 VDDIEDGSQLRRGKPVAHAIFGVPSTLNTANYVYF----IALEECHRLDNGEALAVFVEELLNLHRGQGQDILWRDSCRCPTEAEYTTMVLDKTGGLFRLAVGMMAAFSDRRKGEFRKLVDLLALYFQIRDDLVNLRSDDYMRSKSYCEDLTEGKFSFPILHAVHAAPGDTRLLNILKQRTENPDVKKHAVEHMASLGSFAYTRTALAKLKADIGAEIALLGGHARLAALMDKLDAQI 295
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A1V9Z5R1_9STRA (Geranylgeranyl pyrophosphate synthetase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5R1_9STRA) HSP 1 Score: 241 bits (614), Expect = 1.190e-76 Identity = 113/178 (63.48%), Postives = 142/178 (79.78%), Query Frame = 1
Query: 1 VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKK 534
+DDIEDNS+LRRG PVAHSI+GVPSTIN AN+V+F ALE+ + LG+ +A++ ++ +NLHRGQG+DILWRDT CPTEEEY++MV++KTGGLFRLAV LMQAFS + + PL+N+L LYFQ+RDD INL +YM+ KSFCEDLTEGKFSFP+I+ IR P DH L LK+
Sbjct: 59 IDDIEDNSELRRGQPVAHSIFGVPSTINCANFVFF----LALEQCNKLGSQKAMDIYISEMINLHRGQGQDILWRDTTTCPTEEEYKAMVINKTGGLFRLAVGLMQAFSTSTKDFIPLVNKLGLYFQVRDDYINLIDTKYMEHKSFCEDLTEGKFSFPLIYGIRKDPNDHRLLSILKQ 232
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Match: A0A0L0FXB4_9EUKA (Geranylgeranyl pyrophosphate synthase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FXB4_9EUKA) HSP 1 Score: 239 bits (610), Expect = 1.690e-76 Identity = 113/181 (62.43%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 4 DDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNSRALESFVQAQLNLHRGQGRDILWRDTNRCPTEEEYESMVLDKTGGLFRLAVDLMQAFSEDRRSYTPLLNQLALYFQIRDDLINLSSPEYMKGKSFCEDLTEGKFSFPIIHCIRAKPRDHHRLLALKKGIES 546
DDIEDNS LRRG+PVAH IYGVP+TIN+ANYVYFQA LER + N AL+ F + L LHRGQG+DI WRD+N+CP ++Y MV+ KTGGLFRL+V LMQ FS+D+R Y PLLN + LYFQIRDD +NL+S EYM KSFCEDLTEGKFS+PI+H + P + L LK+ ES
Sbjct: 19 DDIEDNSNLRRGIPVAHIIYGVPATINSANYVYFQA----LERITEMDNMEALQIFSKEMLELHRGQGKDIYWRDSNKCPQFDDYNEMVIQKTGGLFRLSVKLMQVFSQDQRDYVPLLNTMGLYFQIRDDYVNLTSTEYMSNKSFCEDLTEGKFSYPIVHSVLKNPNERQLLNILKQRTES 195 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10861.576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10861.576.1 >prot_S-dermatodea_contig10861.576.1 ID=prot_S-dermatodea_contig10861.576.1|Name=mRNA_S-dermatodea_contig10861.576.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=204bp VDDIEDNSKLRRGVPVAHSIYGVPSTINTANYVYFQASCTALERTHALGNback to top mRNA from alignment at S-dermatodea_contig10861:184..2002+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10861.576.1 ID=mRNA_S-dermatodea_contig10861.576.1|Name=mRNA_S-dermatodea_contig10861.576.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1819bp|location=Sequence derived from alignment at S-dermatodea_contig10861:184..2002+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10861:184..2002+ >mRNA_S-dermatodea_contig10861.576.1 ID=mRNA_S-dermatodea_contig10861.576.1|Name=mRNA_S-dermatodea_contig10861.576.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at S-dermatodea_contig10861:184..2002+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |