prot_S-dermatodea_contig10826.560.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10826.560.1
Unique Nameprot_S-dermatodea_contig10826.560.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length386
Homology
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BLAST of mRNA_S-dermatodea_contig10826.560.1 vs. uniprot
Match: A0A6H5LAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAT0_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 5.260e-7
Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 0 
Query:  315 GGDGASGTCDEEL--SSTKEDDMALVVELQDEREGLLAVRERLRREVASLQEEEDELRRSLGLPTVH-------PEPAPPP 386
            GG  + G+ DE    ++T+++D+ALV E+  EREGLLAVR RLRREV +LQ+EEDELR  LGLP          P P PPP
Sbjct:  855 GGGTSDGSKDETEGPTTTRDEDLALVREMHQEREGLLAVRTRLRREVVTLQDEEDELRLVLGLPPARSELVLATPPPLPPP 935
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BLAST of mRNA_S-dermatodea_contig10826.560.1 vs. uniprot
Match: D7FVQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ0_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 3.590e-6
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 0 
Query:  318 GASGTCD------EELSSTKEDDMALVVELQDEREGLLAVRERLRREVASLQEEEDELRRSLGLPTVHPE 381
            G  GT D      E  ++T+++D+ALV E+  E EGLLAVR+RLRREV +LQ+EEDELR  LGLP    E
Sbjct:  545 GGGGTSDGNKDETEGPTTTRDEDLALVREMHQESEGLLAVRKRLRREVVTLQDEEDELRLVLGLPPARSE 614
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10826.560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAT0_9PHAE5.260e-753.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVQ0_ECTSI3.590e-654.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 338..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10826contigS-dermatodea_contig10826:3609..7153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10826.560.1mRNA_S-dermatodea_contig10826.560.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10826 3609..7153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10826.560.1 ID=prot_S-dermatodea_contig10826.560.1|Name=mRNA_S-dermatodea_contig10826.560.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=386bp
PSATTSGTRRARAQGKDSHRTGHTADEEGGDDTPGDNSSGGGCDAGGKRS
PQDEPVAVTNSAARGGLSPKPRGTAKGKAAKARAGRGGQSGKGTKRKAAT
APTEASLPNDRDQAGERAATRESGGSARQKRGRGKERAPDSPLGDEQGGG
DCSDRDWDFGGGSCGEVDEEVDVHSAGEADIALRQDEAKEKKNKKSESVG
VCGKRRLQQKGKKPAKAKKARVASAPVNKKGSGGGAKNGRGGGAGSAAGE
DRPHTAKQKGVPSSRKATAAEDPDIASGESGAARKPSARRQKSIPTPRSA
TAKRGNRLGKGKSGGGDGASGTCDEELSSTKEDDMALVVELQDEREGLLA
VRERLRREVASLQEEEDELRRSLGLPTVHPEPAPPP
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