prot_S-dermatodea_contig9991.17909.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9991.17909.1
Unique Nameprot_S-dermatodea_contig9991.17909.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length303
Homology
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BLAST of mRNA_S-dermatodea_contig9991.17909.1 vs. uniprot
Match: D8LQP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP5_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.200e-33
Identity = 128/336 (38.10%), Postives = 161/336 (47.92%), Query Frame = 0 
Query:   26 GKKLQTVMRVRAEDERTMALLRKECDGAVLASMDAQRKQEQALSLVSGLQADVDALQAQVEVLQSALWLERERANSARKEQKTAEATLAKLGPSSKTAAGTRPVARAVGGNIDFV---------------------------AATTRQRGG------GGRGSR--PATSPATPLTPSARGKNRGKLPGGRLGAARG-----GVGEWSEFYDSRSDSLIDQIINESGGGE-----TLAA-------------FSTEGIQA-RVSPGGDGEGSNVRDGGFVLDLEGRRASGMFGGGGVYAGRPQDS-----PRVTAFQRWKEERGILSPGVAQKFARQ 297
            G KL TVM VRAEDERTMALLRKECD +++ SM+A+ K++QA++LVSGLQAD++ALQ QV VLQSALWLE+ERA++A        A+   +GPS  T  G    A  + G+                                 + ++R G      G RG R  PAT+PA           RGKLP G  G   G     G G             +  + +E GGG      T A              F   G  A   SP G  +  ++    FVLDL+GRR  G  GGGG   G   +S       +T FQRWK ERGI+SPGVA+ F  Q
Sbjct:    9 GNKLHTVMSVRAEDERTMALLRKECDQSMVTSMEAKIKEKQAMTLVSGLQADIEALQTQVGVLQSALWLEKERASAA------VRASRGAIGPS--TRGGVSKAALTMTGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGPSGKRRNGIPLKRIGERGGRRRPATAPAKDTQAL-----RGKLPHGNAGDLYGRNKPRGGGVGGNCSSQHLGGGLGFLASEQGGGAGSPDGTTATDGSFTDAWASNDYFHGAGAGAGEKSPQGYQQERSIEQ--FVLDLDGRR--GYAGGGGSGTGGEVESGGGGQTTITPFQRWKRERGIVSPGVAEMFGGQ 327
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9991.17909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQP5_ECTSI2.200e-3338.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9991contigS-dermatodea_contig9991:241..3573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9991.17909.1mRNA_S-dermatodea_contig9991.17909.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9991 214..3573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9991.17909.1 ID=prot_S-dermatodea_contig9991.17909.1|Name=mRNA_S-dermatodea_contig9991.17909.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=303bp
MQESLKVERVIVKQCNQLKSELVSSGKKLQTVMRVRAEDERTMALLRKEC
DGAVLASMDAQRKQEQALSLVSGLQADVDALQAQVEVLQSALWLERERAN
SARKEQKTAEATLAKLGPSSKTAAGTRPVARAVGGNIDFVAATTRQRGGG
GRGSRPATSPATPLTPSARGKNRGKLPGGRLGAARGGVGEWSEFYDSRSD
SLIDQIINESGGGETLAAFSTEGIQARVSPGGDGEGSNVRDGGFVLDLEG
RRASGMFGGGGVYAGRPQDSPRVTAFQRWKEERGILSPGVAQKFARQAGY
RG*
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