prot_S-dermatodea_contig9973.17896.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9973.17896.1
Unique Nameprot_S-dermatodea_contig9973.17896.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length195
Homology
BLAST of mRNA_S-dermatodea_contig9973.17896.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 6.600e-46
Identity = 99/191 (51.83%), Postives = 123/191 (64.40%), Query Frame = 0
Query:    1 LQGRRSAERVKRERAAFAAVGLRQLPSGNLLSRSWGLASLSPKLDCITAYSKMRQQYLMDGVLDPIPLLVVEEGAAPRRRPPSNLVNPLLLVTEKKGVAYSLHYGAFPLDAFHTDVAWWKLRDESVQDEHGKLAPTVVRRQEPGVLG--CRELPVAPAATPATQRGIQNAWLGAALEELAQMCGAFLGVTA 189
            LQ   +A RVKRERAA            ++ SR+ GLAS     DC+  Y++MR+++L  GVLDP PLL+ +   + +RR   +LVNPLLLVTE KG+AYSLHY AFPLDAFHTDV WWKLR E++Q E GK+AP V + Q   + G    + P +   T  TQR  QN W   ALEELAQMCGAF+  TA
Sbjct:  245 LQREGAAARVKRERAAVIGTYCPPRDDLSIHSRAMGLASFRQG-DCMNPYAEMRREFLKKGVLDPFPLLLEDGAESGKRRGSFDLVNPLLLVTETKGMAYSLHYAAFPLDAFHTDVCWWKLRPENLQGEFGKVAPKVTKPQGFNLAGSGATQGPFSFKPTAKTQRDTQNVWFVTALEELAQMCGAFVRATA 434          
BLAST of mRNA_S-dermatodea_contig9973.17896.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 3.100e-45
Identity = 101/186 (54.30%), Postives = 124/186 (66.67%), Query Frame = 0
Query:    9 RVKRERAAFAAVGLRQLPS--GNLLSRSWGLASLSPKLDCITAYSKMRQQYLMDGVLDPIPLLVVEEGAAPRRRPPSNLVNPLLLVTEKKGVAYSLHYGAFPLDAFHTDVAWWKLRDESVQDEHGKLAPTVVRRQEPGV---LGCRELPVAPAATPATQRGI-QNAWLGAALEELAQMCGAFLGVT 188
            R++RER AF     + +P   GN++SR+ GL+S     + I A +KMR+QYL +G+LDP PLL+ EEGA   RR P   VNPLLLVTE+KG A SLHYGAFPLDAFHTDV+WWK+R ES+QDE GKLA  V + ++ G    LG           P    G+ Q+AW G ALEELAQMCGAFL  T
Sbjct:  253 RIRRERTAFLT---KYMPKSMGNIISRAMGLSSFCQG-ESIEANAKMRRQYLREGILDPFPLLL-EEGAPAVRRGPFRKVNPLLLVTERKGAASSLHYGAFPLDAFHTDVSWWKVRPESLQDEFGKLARRVTKHRDAGSHSGLG----------GPKVANGVRQDAWFGTALEELAQMCGAFLAAT 423          
BLAST of mRNA_S-dermatodea_contig9973.17896.1 vs. uniprot
Match: D8LCP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP5_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 9.570e-30
Identity = 75/143 (52.45%), Postives = 90/143 (62.94%), Query Frame = 0
Query:   57 YLMDGVLDPIPLLVVEEGAAPRRRPPSNLVNPLLLVTEKKGVAYSLHYGAFPLDAFHTDVAWWKLRDESVQDEHGKLAPTVVRRQEP----GVLGCRELPVAPAATPATQRGIQNAWLGAALEELAQMCGAFLGVTAMPRGSS 195
            +L +G+LDP PLL  +  A  +RR P  LVNPLLLVTE+KG A SLHYGAFPLDAF+T  + WKLR +S QDE+G+ APTV + +E     G  G R   +  +         Q AWL AALEELAQMCGA L  TA     S
Sbjct:  121 HLREGILDPFPLLCEDTPA--KRRGPCKLVNPLLLVTERKGAASSLHYGAFPLDAFNT-ASLWKLRPQSFQDEYGQQAPTVTKPREMNSQIGGGGSRVTSIPTSVA-------QQAWLSAALEELAQMCGALLRATATSNADS 253          
BLAST of mRNA_S-dermatodea_contig9973.17896.1 vs. uniprot
Match: A0A6H5JFV6_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV6_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 6.360e-26
Identity = 82/190 (43.16%), Postives = 101/190 (53.16%), Query Frame = 0
Query:    9 RVKRERAAFAAVGLRQLPSG---NLLSRSWGLASLSPKLDCITAYSKMRQQYLMDGVLDPIPLLVVEEGAAPRRRPPSNLVNPLLLVTEKKGVAYSLHYGAFPLDAFHTDVAWWKLRDESVQDEHGKLAPTVVRRQEPGVLGCRELPVAPAATPATQRGIQNAWLGAALEELAQMCGAFLGVTAMPRGSS 195
            ++++ER+AF A   + +P G   N +SR+ GLAS     + + A SKMR+QYL +G+LDP PLL   E    +RR P  LVNPLLLVTE+KG A SLHYGAFPLDAF+T                             G  G R   +  +         Q AWL  ALEELAQMCGA L VTA     S
Sbjct:  140 KIRQERSAFLA---KYMPKGKKLNFVSRAMGLASCRLP-ETMEASSKMRRQYLREGILDPFPLL--REDTPAKRRGPCKLVNPLLLVTERKGAASSLHYGAFPLDAFNTG----------------------------GGEGSRVTSIPTSIA-------QEAWLSTALEELAQMCGALLRVTATSNADS 288          
BLAST of mRNA_S-dermatodea_contig9973.17896.1 vs. uniprot
Match: D8LNQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ6_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 9.250e-9
Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 0
Query:  116 VAWWKLRDESVQDEHGKLAPTVVRRQEPGVLGCRELPVAPAATPATQRGIQNAWLGAALEELAQMCGAFLGVT 188
            ++WWKLR E +Q + GKL+P V +  E    G    P  P    A +   QNAW G ALEELAQMCGAFL  T
Sbjct:  202 LSWWKLRPERLQGDFGKLSPRVTKHLE---AGAHSGPGEPKVANALR---QNAWFGTALEELAQMCGAFLAAT 268          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9973.17896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXN8_ECTSI6.600e-4651.83MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LNQ8_ECTSI3.100e-4554.30MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D8LCP5_ECTSI9.570e-3052.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFV6_9PHAE6.360e-2643.16MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNQ6_ECTSI9.250e-949.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9973contigS-dermatodea_contig9973:3763..5661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9973.17896.1mRNA_S-dermatodea_contig9973.17896.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9973 3762..5661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9973.17896.1 ID=prot_S-dermatodea_contig9973.17896.1|Name=mRNA_S-dermatodea_contig9973.17896.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=195bp
LQGRRSAERVKRERAAFAAVGLRQLPSGNLLSRSWGLASLSPKLDCITAY
SKMRQQYLMDGVLDPIPLLVVEEGAAPRRRPPSNLVNPLLLVTEKKGVAY
SLHYGAFPLDAFHTDVAWWKLRDESVQDEHGKLAPTVVRRQEPGVLGCRE
LPVAPAATPATQRGIQNAWLGAALEELAQMCGAFLGVTAMPRGSS
back to top