prot_S-dermatodea_contig9862.17827.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9862.17827.1
Unique Nameprot_S-dermatodea_contig9862.17827.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length150
Homology
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A843U288_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843U288_COLES)

HSP 1 Score: 58.5 bits (140), Expect = 3.850e-7
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    4 CLIC-HENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSITKT 54
            C IC  E    V RG++  C H FCF+ I+ WSK E+KCPVC+R+FM+++K+
Sbjct:  315 CGICLSEEHNRVIRGLLDCCAHYFCFACIMEWSKVESKCPVCKRRFMTVSKS 366          
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A8B7CWA2_PHODC (uncharacterized protein LOC103720028 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7CWA2_PHODC)

HSP 1 Score: 57.8 bits (138), Expect = 7.170e-7
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 CLIC-HENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSITKT 54
            C IC  E      +G++  C H FCF+ I+ WSK E++CPVC+R+FM+ITK+
Sbjct:  366 CGICLSEEQKGTIQGVLNCCAHYFCFACIMEWSKVESRCPVCKRRFMTITKS 417          
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A6I9Q9B0_ELAGV (uncharacterized protein LOC105032814 isoform X2 n=2 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9Q9B0_ELAGV)

HSP 1 Score: 57.4 bits (137), Expect = 9.770e-7
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    4 CLIC-HENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSITKT 54
            C IC  E       G++  C H FCF+ I+ WSK E++CPVC+R+FM+ITK+
Sbjct:  372 CGICLSEEQKGTIEGVLNCCAHYFCFACIMEWSKVESRCPVCKRRFMTITKS 423          
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A0D9VT38_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VT38_9ORYZ)

HSP 1 Score: 57.4 bits (137), Expect = 9.770e-7
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    4 CLIC-HENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSITKTLDE 57
            C IC  E      +G++  C H FCF+ I+ WSK E+KCP+C+R+F +ITK+L E
Sbjct:  410 CGICLSEEQRVTVQGLLDCCSHYFCFACIMQWSKVESKCPLCKRRFTTITKSLKE 464          
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A7I8KL25_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KL25_SPIIN)

HSP 1 Score: 57.0 bits (136), Expect = 1.290e-6
Identity = 23/53 (43.40%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    4 CLIC-HENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSITKTL 55
            C IC  E   +  RG++  C H FCF+ I+ WSK E++CPVC+R+F +++K++
Sbjct:  329 CGICLSEEKKEATRGLLDCCSHFFCFACIMEWSKVESRCPVCKRRFKTVSKSV 381          
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A6P5S5Q7_PRUAV (uncharacterized protein LOC110753353 isoform X1 n=10 Tax=Prunus TaxID=3754 RepID=A0A6P5S5Q7_PRUAV)

HSP 1 Score: 56.6 bits (135), Expect = 1.790e-6
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    4 CLICHENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSI 51
            C IC+ N     RG I  C H FCF  I+ WSKTE++CP+CR +F +I
Sbjct:   47 CAICYSNDEKAVRGEIDCCDHYFCFYCIMEWSKTESRCPLCRSRFTTI 94          
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A2H9ZYQ4_9ASPA (Methyl-CpG-binding domain-containing protein 9 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZYQ4_9ASPA)

HSP 1 Score: 56.6 bits (135), Expect = 1.800e-6
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    4 CLIC-HENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSITKT 54
            C IC  E      +GI+  C H FCF+ I+ WSK E++CP+C+R+F +ITKT
Sbjct:  352 CGICLSEEQKGTVQGILNCCSHYFCFACIMEWSKVESRCPLCKRRFSTITKT 403          
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A835RP86_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RP86_VANPL)

HSP 1 Score: 56.6 bits (135), Expect = 1.800e-6
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 CLIC-HENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSITKT 54
            C IC  E      +GI+  C H FCFS I+ WSK E++CP+C+R+F++ITK+
Sbjct:  365 CGICLSEEQKGTIQGILNCCSHYFCFSCIMEWSKVESRCPLCKRRFVTITKS 416          
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A7I8IWM2_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IWM2_SPIIN)

HSP 1 Score: 56.2 bits (134), Expect = 2.280e-6
Identity = 23/53 (43.40%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    4 CLIC-HENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSITKTL 55
            C IC  E   +  RG++  C H FCF+ I+ WSK E++CPVC+R+F +++K++
Sbjct:  183 CGICLSEEKKEAIRGLLDCCSHFFCFACIMEWSKVESRCPVCKRRFKTVSKSV 235          
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Match: A0A5A7QKF1_STRAF (PHD and RING finger domain-containing protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QKF1_STRAF)

HSP 1 Score: 56.2 bits (134), Expect = 2.410e-6
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 CLIC-HENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMSITKT 54
            C IC  E      RGI+  C H FCF+ I+ WSK E++CP+C+++FM+I++T
Sbjct:  382 CGICLSEEAKRTVRGILNCCSHYFCFACIMEWSKVESRCPLCKQRFMTISRT 433          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9862.17827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A843U288_COLES3.850e-750.00Uncharacterized protein n=1 Tax=Colocasia esculent... [more]
A0A8B7CWA2_PHODC7.170e-748.08uncharacterized protein LOC103720028 n=1 Tax=Phoen... [more]
A0A6I9Q9B0_ELAGV9.770e-748.08uncharacterized protein LOC105032814 isoform X2 n=... [more]
A0A0D9VT38_9ORYZ9.770e-747.27Uncharacterized protein n=1 Tax=Leersia perrieri T... [more]
A0A7I8KL25_SPIIN1.290e-643.40Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A6P5S5Q7_PRUAV1.790e-650.00uncharacterized protein LOC110753353 isoform X1 n=... [more]
A0A2H9ZYQ4_9ASPA1.800e-648.08Methyl-CpG-binding domain-containing protein 9 n=1... [more]
A0A835RP86_VANPL1.800e-648.08Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
A0A7I8IWM2_SPIIN2.280e-643.40Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A5A7QKF1_STRAF2.410e-646.15PHD and RING finger domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 4..44
e-value: 0.0048
score: 26.1
IPR001841Zinc finger, RING-typePFAMPF14634zf-RING_5coord: 4..46
e-value: 4.7E-8
score: 32.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 4..45
score: 11.486
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..65
e-value: 1.2E-12
score: 48.9
NoneNo IPR availablePANTHERPTHR46077:SF1TOP1 BINDING ARGININE/SERINE RICH PROTEINcoord: 2..59
NoneNo IPR availablePANTHERPTHR46077FAMILY NOT NAMEDcoord: 2..59
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 3..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9862contigS-dermatodea_contig9862:473..4510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9862.17827.1mRNA_S-dermatodea_contig9862.17827.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9862 473..4510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9862.17827.1 ID=prot_S-dermatodea_contig9862.17827.1|Name=mRNA_S-dermatodea_contig9862.17827.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=150bp
EDPCLICHENLPDVGRGIIIGCGHVFCFSHILTWSKTETKCPVCRRQFMS
ITKTLDERDVARKNAREARFKYRMRKNEMDKKQIDRERRKLASYKTPLIW
KLCRKSPGKNCHRQMQKKYVATKIIRVRPCSQEKTYTRQLRNAPHPQVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD