prot_S-dermatodea_contig9834.17808.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9834.17808.1
Unique Nameprot_S-dermatodea_contig9834.17808.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length122
Homology
BLAST of mRNA_S-dermatodea_contig9834.17808.1 vs. uniprot
Match: D8LN83_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN83_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 2.240e-61
Identity = 106/123 (86.18%), Postives = 113/123 (91.87%), Query Frame = 0
Query:    1 MTTRLPLPPSWPPVMKTVYKPWLDDEDAENVFFGSVSLQDKDLFYPASGTEEEKFDDNK-NIVNVSLSALGPTPGEETKKRALTKTKMTEYVNKAGAEFKAKCQRTLLARLKEFSPDLLIMSA 122
            MTTRLPLPPSWPP+ KTVYKPWLDD DA+NVFFGSVSLQDKDLFYPASGTEEE+F+DN  NIVNVSLS LGPTPG+E KKRALTKTK+TEY NKA  EFK KCQRTLLARLKEFSPDLLI+SA
Sbjct:  645 MTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEEERFNDNDANIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISA 767          
BLAST of mRNA_S-dermatodea_contig9834.17808.1 vs. uniprot
Match: A0A6H5JJZ7_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ7_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 2.360e-60
Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = 0
Query:    1 MTTRLPLPPSWPPVMKTVYKPWLDDEDAENVFFGSVSLQDKDLFYPASGTEEEKFDDNK-NIVNVSLSALGPTPGEETKKRALTKTKMTEYVNKAGAEFKAKCQRTLLARLKEFSPDLLIMSA 122
            M TRLPLPPSWPP+ KTVYKPWLDD DA+NVFFGSVSLQDKDLFYPASGTE+E+F+DN  NIVNVSLS LGPTPG+E KKRALTKTK+TEY NKA  EFK KCQRTLLARLKEFSPDLLI+SA
Sbjct:  585 MNTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEDERFNDNDDNIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISA 707          
BLAST of mRNA_S-dermatodea_contig9834.17808.1 vs. uniprot
Match: A0A8J2T2D3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2D3_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.470e-21
Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 0
Query:    6 PLPPSWPPVMKTVYKPWLDDEDAENVFFGSVSLQD-KDLFYPASGTEEEKFDDNKNIVNVSLSALGPTPGEETKKRALTKTKMTEYVNKAGAEFKAKCQRTLLARLKEFSPDLLIMSA 122
            PLP SWP   + V+KPWLD+ D + VFFGSV L D K  FYP  G  +E  D    IVNV L+A+GP PG+   +++LT ++  +  ++AGA  +      LL  L+ F  DL+I SA
Sbjct:  326 PLPDSWPAEYREVHKPWLDESDGDEVFFGSVHLWDAKGAFYPGGGGPQESSD---TIVNVPLAAVGPKPGDVRARQSLTASQRAKLCDEAGANLRRDVSAQLLPALQRFDADLVIFSA 440          
BLAST of mRNA_S-dermatodea_contig9834.17808.1 vs. uniprot
Match: A0A836CER0_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.690e-12
Identity = 37/80 (46.25%), Postives = 47/80 (58.75%), Query Frame = 0
Query:    4 RLPLPPSWPPVMKTVYKPWLDDEDAENVFFGSVSLQDKDLFYPASGTEEEKFDDNK-------NIVNVSLSALGPT-PGE 75
            RLPLPPSWPP     YKPWLD++DAENV F S++L     FYPASG       D         +I+N +L+ +G   PG+
Sbjct:  460 RLPLPPSWPPAFAATYKPWLDEDDAENVMFASINLVQGHDFYPASGHASAGGGDGDGDELHGGHIINAALAPVGGVAPGD 539          
BLAST of mRNA_S-dermatodea_contig9834.17808.1 vs. uniprot
Match: A0A7S1HP25_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HP25_HEMAN)

HSP 1 Score: 51.2 bits (121), Expect = 5.380e-5
Identity = 35/105 (33.33%), Postives = 55/105 (52.38%), Query Frame = 0
Query:   19 YKPWLDDEDAENVFFGSVSLQDKDLFYPASGTEEE-KFDDNKNIVNVSLSALGPTPGEETKKRALTKTKMTEYVNKAGAEFKAKCQRTLLARLKEFSPDLLIMSA 122
            YKPWLD+ DAENVFF S+ L  +D FYP    +E  +F + +  +N   ++  P                T+ V ++   F++     L+ RL+ F PDL+++SA
Sbjct:  189 YKPWLDETDAENVFFASLHLSAED-FYPRLAVKECCRFGEPEFGLNHEGASDDPAYPNVLS----IPMHKTQTVEESSRLFRSLVDSRLINRLRSFRPDLIMISA 288          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9834.17808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LN83_ECTSI2.240e-6186.18Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JJZ7_9PHAE2.360e-6084.55Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
A0A8J2T2D3_9STRA3.470e-2144.07Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A836CER0_9STRA1.690e-1246.25Histone deacetylase domain-containing protein n=1 ... [more]
A0A7S1HP25_HEMAN5.380e-533.33Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 18..122
NoneNo IPR availablePANTHERPTHR45634:SF14coord: 18..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9834contigS-dermatodea_contig9834:3753..7250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9834.17808.1mRNA_S-dermatodea_contig9834.17808.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9834 3739..7250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9834.17808.1 ID=prot_S-dermatodea_contig9834.17808.1|Name=mRNA_S-dermatodea_contig9834.17808.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=122bp
MTTRLPLPPSWPPVMKTVYKPWLDDEDAENVFFGSVSLQDKDLFYPASGT
EEEKFDDNKNIVNVSLSALGPTPGEETKKRALTKTKMTEYVNKAGAEFKA
KCQRTLLARLKEFSPDLLIMSA
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