prot_S-dermatodea_contig983.17806.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig983.17806.1
Unique Nameprot_S-dermatodea_contig983.17806.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length918
Homology
BLAST of mRNA_S-dermatodea_contig983.17806.1 vs. uniprot
Match: D7FM25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM25_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 8.910e-50
Identity = 173/489 (35.38%), Postives = 234/489 (47.85%), Query Frame = 0
Query:  166 QVAVADNGRLGWPDVLAMASDLELTPQLVDIGALKIAVEQVSAAPHRLPIAINGSTPNGSSCDIIGRERRVWPGISYPQFVEVLSLLATAAASRLRSLYPDVAGVEPCIRV--QRASNVEQNAIGEATGSGVDLSASRSGPSAFDKDPPARVPGGVGGEKVKNRANLGGVARKRAINVRAVLRMGARCVRSIT-SDGDSSALSVAKAQEARNRDYDVGAFKALFHHARGARE-KRDPPTRGR-------SRAEISRLVPNSADGREAEPCAARRPPSPDGY-----SQASDDGSSDDLAEWPGCHAQDVRRADGDGQRSSCGHGGEAFAESKDGAHVVATAAEPGRIVDEIAGRLSDFEKDIFPSGYGQRATDDQRSPSDAS-PSLHQRR---IEDQNTKVSRAGGVSGPLARLVVIKEMQPVPEHAPESARHLLEVALDHQQAGRYALALDTLDKAGITWGSLLGPQQSRSFPPRGGGSIWGLNAADE 634
            Q A++   R+ W   LA +SDL+L P+L+ +GALK AVEQ   +  R   A   S                  G+SYPQFVEVLSL+A  AA RLR LYP+VAG EP   V   R  N   N    +T  G        GP A +            GE   N  +L    +++A +VRA +R+  +  RS+  + G   A  V +  E     YDVGAFKALFHHA  A E KR   TR +       S + +S          + E  + R  P  +G      S+ S+ G +DD     G   + +   D +G  +         ++SK     V +  E  R+++EI  R+SD E  + P    +  T    + S+   P     R   +E++      A G  G  ARLVVIKE+QPVPEHAPE A HLL++ALDH QAGRYALAL+TL+K  + W  L G  +    P    G   GL+A+DE
Sbjct:   35 QTAISKARRIHWAGFLAASSDLQLVPRLIGLGALKAAVEQGGPSSDRNAAATKRSAA----------------GMSYPQFVEVLSLMAIPAAGRLRRLYPNVAGPEPPAAVVGPRHRNTPTN----STSDGTTSRGGGGGPLALEITSEEAGRRDEAGEGSGNERSL---FQRKARHVRAAMRLRMKKGRSVVVAPGTPDAPPVDEQPEQVPPSYDVGAFKALFHHAETAHEEKRSGATRPQGFHCRNVSSSSLSPPACRDTVTTKGEGASERSSPRSNGSCIDEGSEPSEGGGNDDGGRGEG---RAISAVDYEGTAAE-------VSDSKTFPQKVFSPQESARVLEEIRDRVSDLEGKVLPHETSEVETGADGTGSETFLPRRDDARAVVVEEEPGPEPLAPGAGGGFARLVVIKELQPVPEHAPEDASHLLDLALDHHQAGRYALALETLEKGVLMWEELQGGGEGDHEPANPEG---GLDASDE 487          
BLAST of mRNA_S-dermatodea_contig983.17806.1 vs. uniprot
Match: A0A6H5L0D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D4_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 3.030e-43
Identity = 166/491 (33.81%), Postives = 229/491 (46.64%), Query Frame = 0
Query:  166 QVAVADNGRLGWPDVLAMASDLELTPQLVDIGALKIAVEQVSAAPHRLPIAINGSTPNGSSCDIIGRERRVWPGISYPQFVEVLSLLATAAASRLRSLYPDVAGVEPCIRV--QRASNVEQNAIGEATGSGVDLSASRSGPSAFD---KDPPARVPGGVGGEKVKNRANLGGVARKRAINVRAVLRMGARCVRSIT-SDGDSSALSVAKAQEARNRDYDVGAFKALFHHARGA-REKRDPPTRGRS----RAEISRLVPNSA-DGREAEPCAARRPPSPDGYSQASDDGSSDDLAEWPGCHAQDVRRADGDGQRSSCGHGGEAFAESKDGAHVVATAAEP---GRIVDEIAGRLSDFEKDIFPSGYGQRATDDQRSPSDASPSLHQRR-------IEDQNTKVSRAGGVSGPLARLVVIKEMQPVPEHAPESARHLLEVALDHQQAGRYALALDTLDKAGITWGSLLGPQQSRSFPPRGGGSIWGLNAADE 634
            Q A++   R+ W   LA +SDL+L P+L+ + ALK AVEQ   +  R   A   S                  G+SYPQFVEVLSL+A +AA RLR LYPDVAG EP   V   R  N   N   + T S         GP A +   ++   R   G G +  ++         ++A +VRA +R+  +  RS+  + G   A  V +  E     YDVGA KALFHHA  A +E+R    R +         S L P +  D    +   A    SP   S  +D+ S       P     +  R  G+G+  S        A+  D    +  A  P    R+++E+  R+SD E  + P    +  T    +  + S +   RR       +E++      A G  G  ARLVVIKE+QPVPEHAP+ A  LL++ LDH QAGRYALAL+TL+K  + W  L G  +    P    G   GL+A+DE
Sbjct:   34 QTAISKARRIHWTGFLAASSDLQLVPRLIGLDALKAAVEQGGPSSDRNAAATKPSAA----------------GMSYPQFVEVLSLVAISAAGRLRRLYPDVAGPEPPAAVGDPRHRNTPTNFTSDGTAS---RGGGGGGPLALEMTSEEAGRRDEAGEGSDNARSPFQ------RKARHVRAAMRLRMKKGRSVVDAPGIPDAPPVDEQPEQVPPYYDVGALKALFHHAETAHKEQRSGTVRPQGFHCHNVSSSSLSPPACRDTMTTKGEGASERSSPRSNSSCTDEKSE------PSEGGGNYDRGRGEGRAISAVDYEGTAAKGPDSNIFLQKAFSPQESARVLEELRDRVSDLEAKVLPHETSEVETG---ANGEGSETFLPRRDDARAVVVEEEPGPEPLAPGAGGGFARLVVIKELQPVPEHAPQDASQLLDLTLDHHQAGRYALALETLEKGALMWEELQGGGEGDHEPANPEG---GLDASDE 487          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig983.17806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM25_ECTSI8.910e-5035.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0D4_9PHAE3.030e-4333.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 570..815

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig983contigS-dermatodea_contig983:10848..21580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig983.17806.1mRNA_S-dermatodea_contig983.17806.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig983 10842..21580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig983.17806.1 ID=prot_S-dermatodea_contig983.17806.1|Name=mRNA_S-dermatodea_contig983.17806.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=918bp
MTLENIQEVWVQQASQGGDKDGGETVEEEEEEDNSHGLRRCQQGQATTTT
TTTTTAGMMSLPSFLQAFEDLARAKYACRYRGEGRGGSASLLLLRDVFNN
ITGAANTKTDATRYGICGHLVRHDVCSLLLTQKAFTTGLFATYFNGEDTQ
HPRTARLVDSVNDKWQVAVADNGRLGWPDVLAMASDLELTPQLVDIGALK
IAVEQVSAAPHRLPIAINGSTPNGSSCDIIGRERRVWPGISYPQFVEVLS
LLATAAASRLRSLYPDVAGVEPCIRVQRASNVEQNAIGEATGSGVDLSAS
RSGPSAFDKDPPARVPGGVGGEKVKNRANLGGVARKRAINVRAVLRMGAR
CVRSITSDGDSSALSVAKAQEARNRDYDVGAFKALFHHARGAREKRDPPT
RGRSRAEISRLVPNSADGREAEPCAARRPPSPDGYSQASDDGSSDDLAEW
PGCHAQDVRRADGDGQRSSCGHGGEAFAESKDGAHVVATAAEPGRIVDEI
AGRLSDFEKDIFPSGYGQRATDDQRSPSDASPSLHQRRIEDQNTKVSRAG
GVSGPLARLVVIKEMQPVPEHAPESARHLLEVALDHQQAGRYALALDTLD
KAGITWGSLLGPQQSRSFPPRGGGSIWGLNAADEVLALLIKASMHQTAGS
DNEALSTLLNADKVVSLVHREDRCLREALRASVLSEIGVVAYYCNRATLS
LRCFRLALVIRHKLLRNSHVSTAEITSDPAGASGEGENRISHPVREDTCE
VPAEVEEAAAAVVLNNVGVCLGNLGEIARAAQALEIASNITISAMGAEHP
RSAAVARNLALVKAAEARMHSGRGRGDFPDRRAFCRWEENIWKSLSSNRR
CSHDRTRDIMLYNSGLQNLNSPHVIPGGFVFTGTLPTEGGDPAGGSNGRR
TQGGSTRKKRGKSTRRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf