prot_S-dermatodea_contig98152.17791.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig98152.17791.1
Unique Nameprot_S-dermatodea_contig98152.17791.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length41
Homology
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: D7G389_ECTSI (Ras-related protein Rab n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G389_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.870e-18
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVHDFFSGHHKTTVGVDFALKQLVV  TTVKLQLWDIAGQ
Sbjct:   98 RYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQ 138          
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: A0A6V1S8I5_HETAK (Ras-related protein Rab n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8I5_HETAK)

HSP 1 Score: 76.3 bits (186), Expect = 5.440e-16
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVH+FFS HHKTTVGVDFALK L VNGT VK+QLWDIAGQ
Sbjct:   28 RYVHNFFSDHHKTTVGVDFALKALNVNGTEVKMQLWDIAGQ 68          
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: A0A7S2V4T6_9STRA (Ras-related protein Rab n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4T6_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.040e-15
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVH+FFS HHKTTVGVDFALKQL V GT V+LQLWDIAGQ
Sbjct:   28 RYVHNFFSTHHKTTVGVDFALKQLHVRGTDVRLQLWDIAGQ 68          
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: K3WGR3_GLOUD (Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGR3_GLOUD)

HSP 1 Score: 75.1 bits (183), Expect = 1.770e-15
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVHD FS HH+TT+GVDFALK + VNGTTV+LQLWDIAGQ
Sbjct:   32 RYVHDAFSEHHRTTIGVDFALKAVTVNGTTVRLQLWDIAGQ 72          
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: H3HAQ4_PHYRM (Ras-related protein Rab n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3HAQ4_PHYRM)

HSP 1 Score: 75.1 bits (183), Expect = 1.830e-15
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVHD FS HH+TT+GVDFALK + VNGTTV+LQLWDIAGQ
Sbjct:   32 RYVHDAFSEHHRTTIGVDFALKAVTVNGTTVRLQLWDIAGQ 72          
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: A0A8K1C4T0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4T0_PYTOL)

HSP 1 Score: 73.9 bits (180), Expect = 5.070e-15
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVHD F+ HH+TT+GVDFALK + VNGTTV+LQLWDIAGQ
Sbjct:   32 RYVHDAFTEHHRTTIGVDFALKAVTVNGTTVRLQLWDIAGQ 72          
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: W2QJV6_PHYPN (Ras-related protein Rab n=3 Tax=Peronosporaceae TaxID=4777 RepID=W2QJV6_PHYPN)

HSP 1 Score: 73.2 bits (178), Expect = 9.990e-15
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVHD FS HH+TT+GVDFALK + V+GTTV+LQLWDIAGQ
Sbjct:   32 RYVHDAFSEHHRTTIGVDFALKAVTVSGTTVRLQLWDIAGQ 72          
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: A0A2D4BS33_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS33_PYTIN)

HSP 1 Score: 75.1 bits (183), Expect = 1.020e-14
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVHD FS HH+TT+GVDFALK + VNGTTV+LQLWDIAGQ
Sbjct:   33 RYVHDAFSEHHRTTIGVDFALKAVTVNGTTVRLQLWDIAGQ 73          
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: A0A1V9YUT9_9STRA (Ras-related protein Rab n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YUT9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.380e-14
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVH+ FS HHKTT+GVDFALK + VNGTT+++QLWDIAGQ
Sbjct:   33 RYVHNVFSDHHKTTIGVDFALKPVTVNGTTLRVQLWDIAGQ 73          
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Match: A0A7S2APD4_9STRA (Ras-related protein Rab n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APD4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.710e-14
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ 41
            RYVH+FFS HH+TTVGVDFALKQL V  T V+LQLWDIAGQ
Sbjct:   46 RYVHNFFSNHHRTTVGVDFALKQLQVYNTVVRLQLWDIAGQ 86          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig98152.17791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G389_ECTSI1.870e-1895.12Ras-related protein Rab n=1 Tax=Ectocarpus silicul... [more]
A0A6V1S8I5_HETAK5.440e-1685.37Ras-related protein Rab n=1 Tax=Heterosigma akashi... [more]
A0A7S2V4T6_9STRA1.040e-1585.37Ras-related protein Rab n=1 Tax=Fibrocapsa japonic... [more]
K3WGR3_GLOUD1.770e-1580.49Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4... [more]
H3HAQ4_PHYRM1.830e-1580.49Ras-related protein Rab n=17 Tax=Peronosporaceae T... [more]
A0A8K1C4T0_PYTOL5.070e-1578.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2QJV6_PHYPN9.990e-1578.05Ras-related protein Rab n=3 Tax=Peronosporaceae Ta... [more]
A0A2D4BS33_PYTIN1.020e-1480.49Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1V9YUT9_9STRA1.380e-1475.61Ras-related protein Rab n=1 Tax=Thraustotheca clav... [more]
A0A7S2APD4_9STRA1.710e-1480.49Ras-related protein Rab n=1 Tax=Dictyocha speculum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 24..41
score: 37.27
coord: 6..22
score: 28.36
NoneNo IPR availableGENE3D3.40.50.300coord: 1..41
e-value: 6.9E-10
score: 40.3
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..41
NoneNo IPR availablePANTHERPTHR24073:SF897RAB38C, MEMBER OF RAS ONCOGENE FAMILY-RELATEDcoord: 1..41
NoneNo IPR availablePROSITEPS51419RABcoord: 1..41
score: 10.129
IPR001806Small GTPasePFAMPF00071Rascoord: 1..41
e-value: 2.2E-9
score: 37.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig98152contigS-dermatodea_contig98152:279..401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig98152.17791.1mRNA_S-dermatodea_contig98152.17791.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig98152 279..401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig98152.17791.1 ID=prot_S-dermatodea_contig98152.17791.1|Name=mRNA_S-dermatodea_contig98152.17791.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=41bp
RYVHDFFSGHHKTTVGVDFALKQLVVNGTTVKLQLWDIAGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase