prot_S-dermatodea_contig9813.17788.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: D8LCR7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCR7_ECTSI) HSP 1 Score: 338 bits (868), Expect = 1.280e-115 Identity = 179/236 (75.85%), Postives = 193/236 (81.78%), Query Frame = 0
Query: 1 MKVLSAVGAMTACASCASAFVTPA----LTRCSTTPSSAVRMSAAVDAVEPVXXXXXXXXXXXAAVMSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLGGGVPFHA 232
MKV+S VGA ACASCASAFV P+ + S S A+RM+ V A EP A MS SIPFL+QP NL+GMVG+IGFDPFGFATIFP KFMREAELKHGRVAMLAVVGW+VSEVVHVPGAAYMSENPVDAMAAVG GPMLQIF FCGFLEWKFHNGKMTMDNMHEDG PG+FGFDP+ L+KK A VRE+YQLQEIKNGRLAMSAIGGL+HQSLLLGGGVPFHA
Sbjct: 1 MKVISTVGAGLACASCASAFVAPSSFSRVISSSPAASKALRMAEEV-AAEPEAAVEPEPVPAGPA-MSASIPFLEQPKNLEGMVGDIGFDPFGFATIFPVKFMREAELKHGRVAMLAVVGWLVSEVVHVPGAAYMSENPVDAMAAVGPGPMLQIFLFCGFLEWKFHNGKMTMDNMHEDGNEPGDFGFDPMMLAKKPADVREKYQLQEIKNGRLAMSAIGGLIHQSLLLGGGVPFHA 234
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A835Z4D2_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D2_9STRA) HSP 1 Score: 235 bits (600), Expect = 7.760e-76 Identity = 112/169 (66.27%), Postives = 135/169 (79.88%), Query Frame = 0
Query: 63 MSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLGGGVPFH 231
MSKS+PFL +P LDG VGN FDPF + + P F+RE+ELKHGR+AMLAVVG++VSE++H+PG AY + NPVDA+ VGA PMLQIFAFCGFLE FH GKMTM +MH DGQ PG+FGFDPLN+SK A + + YQL EIKNGRLAM AI GL+HQS++ G GVPF+
Sbjct: 1 MSKSLPFLVKPKQLDGWVGNAEFDPFSLSELLPMAFVRESELKHGRIAMLAVVGFVVSELIHIPGEAYQASNPVDAVNMVGAQPMLQIFAFCGFLESVFHKGKMTMMDMHADGQTPGDFGFDPLNVSKDPAKLAQ-YQLSEIKNGRLAMMAISGLIHQSIITGHGVPFN 168
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A6V1U3D5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U3D5_HETAK) HSP 1 Score: 199 bits (505), Expect = 1.790e-61 Identity = 101/164 (61.59%), Postives = 123/164 (75.00%), Query Frame = 0
Query: 63 MSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQ-VPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLG 225
MSKS+PFL P N GM+G+ GFDPFGF+ F K+MREAELKHGRV+MLAVVG++VS+ VH+PG AY S NP+DA++ VG P+ QIF FCGFLE+ + GKMTM +M ED + PG GFDP+NL K S E QL+E++NGRLAM AIGGLVH LL G
Sbjct: 1 MSKSMPFLAAPKNTAGMIGDKGFDPFGFSDDFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIDALSMVGPQPLAQIFLFCGFLEFTMNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPS--EEMQLKELENGRLAMCAIGGLVHHFLLFG 162
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: W7TJ16_9STRA (Light-harvesting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ16_9STRA) HSP 1 Score: 184 bits (467), Expect = 5.420e-54 Identity = 93/165 (56.36%), Postives = 115/165 (69.70%), Query Frame = 0
Query: 62 VMSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQ-VPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLG 225
V SKS+PFL +P NLDGMVG++GFDP G A +++REAELK+GRVAMLA +G++V E + +PG Y N V A VG P++QIF FCGFLE+ H GKMT +M DG+ PG FGFDPL K S RER L E+KNGRLAM AIGGL+H +L+ G
Sbjct: 126 VFSKSVPFLLKPKNLDGMVGDVGFDPLGLAEYVDIRWLREAELKNGRVAMLAFLGFVVQEFIRLPGDLYSEPNGVKAFFQVGPQPLIQIFLFCGFLEFTLHKGKMTQMDMFADGKREPGNFGFDPLGFGK-DPSKRERLALAELKNGRLAMIAIGGLIHHALVTG 289
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: L1IG53_GUITC (Light-harvesting Chl a protein 9 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IG53_GUITC) HSP 1 Score: 166 bits (421), Expect = 5.160e-48 Identity = 91/173 (52.60%), Postives = 118/173 (68.21%), Query Frame = 0
Query: 63 MSKSIPFLKQPANLDG-MVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPV--DAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLGGGVPFHA 232
MS+S+PFL +PA LDG MVG++GFDPFGF++ + K++RE+ELKHGRV MLA +G+IV E VH+P A + NPV +A V AG + QIFAF G +E HN KM+ M DG+ PG FGFDPL K + R RY+L E+KNGRLAM G++H S + G G P +A
Sbjct: 41 MSQSVPFLPRPAALDGKMVGDVGFDPFGFSSKYDIKWLRESELKHGRVCMLASLGYIVQEFVHLPFEA--TSNPVGSEAFYQVPAGGLWQIFAFIGAIEHFSHNFKMSGSTMFSDGRTPGNFGFDPLGFGK-NPQARARYELAELKNGRLAMLGFSGMIHGSFITGKG-PINA 209
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A7S4DC05_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC05_HETAK) HSP 1 Score: 164 bits (415), Expect = 1.160e-47 Identity = 80/133 (60.15%), Postives = 100/133 (75.19%), Query Frame = 0
Query: 63 MSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQ-VPGEFGFDPLNLSKKSAS 194
MSKS+PFL P N GM+G+ GFDPFGF+ F K+MREAELKHGRV+MLAVVG++VS+ VH+PG AY S NP++A++ VG P+ QIF FCGFLE+ + GKMTM +M ED + PG GFDP+NL K S
Sbjct: 45 MSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPS 177
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A7S0T6N2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6N2_9RHOD) HSP 1 Score: 165 bits (417), Expect = 1.540e-47 Identity = 85/169 (50.30%), Postives = 111/169 (65.68%), Query Frame = 0
Query: 61 AVMSKSIPFLKQPANLD-GMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLGGGV 228
A S S+PFL +PAN+D MVG GFDP G +T A+F++E+E+KHGR+ MLAVVG++V EVVH+PG + ++ +A + V G + QIF CG E+ H GKMT ++ D PG GFDPLNL K + ++QL EIKNGRLAM AIGG +HQ L GV
Sbjct: 31 AEKSASVPFLSKPANIDESMVGYTGFDPLGLSTYLSARFLQESEIKHGRICMLAVVGFLVQEVVHLPGEVFSAKLATEAFSKVPTGGLWQIFIACGVAEYIGHKGKMTYMDISADKGTPGAMGFDPLNLGKDPEKFK-KFQLNEIKNGRLAMIAIGGFIHQMWLTKQGV 198
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A1Z5JQG8_FISSO (Light-harvesting complex I chlorophyll a/b binding protein 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQG8_FISSO) HSP 1 Score: 160 bits (405), Expect = 7.100e-46 Identity = 86/167 (51.50%), Postives = 117/167 (70.06%), Query Frame = 0
Query: 61 AVMSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDG-QVPGEFGFDPLNLSK-KSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLG 225
A MSKSIPFL P N G VG++GFDP GF+ F K++RE+E+KH R AMLA +G++V + V +PG + ++ + A AAVG PMLQIF G LE+ +NGK+T++NM D +VPG FGFDPL ++K KSA +L+EIKNGRLAM AIGG++ +++ G
Sbjct: 30 AEMSKSIPFLTAPKNTAGWVGDVGFDPLGFSDYFDMKWLRESEIKHSRAAMLASLGFMVQQFVTLPGMPDVDDSML-APAAVGPSPMLQIFFGLGVLEFWSNNGKVTIENMFSDSSRVPGNFGFDPLGMAKGKSAEAMADMELKEIKNGRLAMCAIGGMMAHNIVTG 195
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A1X6NTR2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTR2_PORUM) HSP 1 Score: 160 bits (406), Expect = 8.070e-46 Identity = 77/164 (46.95%), Postives = 108/164 (65.85%), Query Frame = 0
Query: 61 AVMSKSIPFLKQPANLDG-MVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLL 223
A S S+PFL QPA DG M G++GFDP + K++RE ELK+GRVAMLA +G +V E VH+P + + DA V AG + Q+F CG E+ H GK++ D+M EDG++PG FGFDPL L K + + +++ +L E+KNGRLAM IGG++H + +
Sbjct: 32 AARSASVPFLPQPAACDGSMAGDVGFDPLNLSGFIDIKWLREGELKNGRVAMLAFLGVLVQEFVHLPSPLFANPVATDAFFQVPAGGLWQVFLACGLCEFVSHRGKLSYDDMFEDGRIPGNFGFDPLGLYKGTPAQKKKLELAEVKNGRLAMIGIGGVIHSNFI 195
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A7S1BY62_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BY62_9STRA) HSP 1 Score: 160 bits (405), Expect = 8.240e-46 Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 0
Query: 42 VDAVEPVXXXXXXXXXXXAAVMSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHED-GQVPGEFGFDPLNLSK-KSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLG 225
V A P +A MS+S+PFL P N G VG++GFDPF F+ F K+MREAE+KHGR +MLA +G++ + + +PG +++++ + AVGAGPMLQI + G LE + G +TM+ M ED +VPG FGFDP+ L+ KS E QL+E+KNGRLAM AIGG++H + + G
Sbjct: 16 VSAFAPASVSGTYSTTTLSAEMSQSVPFLLAPKNTKGWVGDVGFDPFSFSENFDMKWMREAEIKHGRTSMLATLGFVAQQYISLPGLPHIADSNLGP-TAVGAGPMLQIVLWMGVLEVWTNKGNITMETMFEDPDRVPGAFGFDPMGLAVGKSEEEMEEMQLKELKNGRLAMLAIGGMIHHNWVTG 200 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-dermatodea_contig9813.17788.1 ID=prot_S-dermatodea_contig9813.17788.1|Name=mRNA_S-dermatodea_contig9813.17788.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=233bpback to top |