mRNA_S-dermatodea_contig9813.17788.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9813.17788.1
Unique NamemRNA_S-dermatodea_contig9813.17788.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: D8LCR7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCR7_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 1.280e-115
Identity = 179/236 (75.85%), Postives = 193/236 (81.78%), Query Frame = 1 
Query:    1 MKVLSAVGAMTACASCASAFVTPA----LTRCSTTPSSAVRMSAAVDAVEPVXXXXXXXXXXXAAVMSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLGGGVPFHA 696
            MKV+S VGA  ACASCASAFV P+    +   S   S A+RM+  V A EP             A MS SIPFL+QP NL+GMVG+IGFDPFGFATIFP KFMREAELKHGRVAMLAVVGW+VSEVVHVPGAAYMSENPVDAMAAVG GPMLQIF FCGFLEWKFHNGKMTMDNMHEDG  PG+FGFDP+ L+KK A VRE+YQLQEIKNGRLAMSAIGGL+HQSLLLGGGVPFHA
Sbjct:    1 MKVISTVGAGLACASCASAFVAPSSFSRVISSSPAASKALRMAEEV-AAEPEAAVEPEPVPAGPA-MSASIPFLEQPKNLEGMVGDIGFDPFGFATIFPVKFMREAELKHGRVAMLAVVGWLVSEVVHVPGAAYMSENPVDAMAAVGPGPMLQIFLFCGFLEWKFHNGKMTMDNMHEDGNEPGDFGFDPMMLAKKPADVREKYQLQEIKNGRLAMSAIGGLIHQSLLLGGGVPFHA 234
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A835Z4D2_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D2_9STRA)

HSP 1 Score: 235 bits (600), Expect = 7.760e-76
Identity = 112/169 (66.27%), Postives = 135/169 (79.88%), Query Frame = 1 
Query:  187 MSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLGGGVPFH 693
            MSKS+PFL +P  LDG VGN  FDPF  + + P  F+RE+ELKHGR+AMLAVVG++VSE++H+PG AY + NPVDA+  VGA PMLQIFAFCGFLE  FH GKMTM +MH DGQ PG+FGFDPLN+SK  A + + YQL EIKNGRLAM AI GL+HQS++ G GVPF+
Sbjct:    1 MSKSLPFLVKPKQLDGWVGNAEFDPFSLSELLPMAFVRESELKHGRIAMLAVVGFVVSELIHIPGEAYQASNPVDAVNMVGAQPMLQIFAFCGFLESVFHKGKMTMMDMHADGQTPGDFGFDPLNVSKDPAKLAQ-YQLSEIKNGRLAMMAISGLIHQSIITGHGVPFN 168
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A6V1U3D5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U3D5_HETAK)

HSP 1 Score: 199 bits (505), Expect = 1.790e-61
Identity = 101/164 (61.59%), Postives = 123/164 (75.00%), Query Frame = 1 
Query:  187 MSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQ-VPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLG 675
            MSKS+PFL  P N  GM+G+ GFDPFGF+  F  K+MREAELKHGRV+MLAVVG++VS+ VH+PG AY S NP+DA++ VG  P+ QIF FCGFLE+  + GKMTM +M ED +  PG  GFDP+NL K   S  E  QL+E++NGRLAM AIGGLVH  LL G
Sbjct:    1 MSKSMPFLAAPKNTAGMIGDKGFDPFGFSDDFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIDALSMVGPQPLAQIFLFCGFLEFTMNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPS--EEMQLKELENGRLAMCAIGGLVHHFLLFG 162
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: W7TJ16_9STRA (Light-harvesting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ16_9STRA)

HSP 1 Score: 184 bits (467), Expect = 5.420e-54
Identity = 93/165 (56.36%), Postives = 115/165 (69.70%), Query Frame = 1 
Query:  184 VMSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQ-VPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLG 675
            V SKS+PFL +P NLDGMVG++GFDP G A     +++REAELK+GRVAMLA +G++V E + +PG  Y   N V A   VG  P++QIF FCGFLE+  H GKMT  +M  DG+  PG FGFDPL   K   S RER  L E+KNGRLAM AIGGL+H +L+ G
Sbjct:  126 VFSKSVPFLLKPKNLDGMVGDVGFDPLGLAEYVDIRWLREAELKNGRVAMLAFLGFVVQEFIRLPGDLYSEPNGVKAFFQVGPQPLIQIFLFCGFLEFTLHKGKMTQMDMFADGKREPGNFGFDPLGFGK-DPSKRERLALAELKNGRLAMIAIGGLIHHALVTG 289
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: L1IG53_GUITC (Light-harvesting Chl a protein 9 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IG53_GUITC)

HSP 1 Score: 166 bits (421), Expect = 5.160e-48
Identity = 91/173 (52.60%), Postives = 118/173 (68.21%), Query Frame = 1 
Query:  187 MSKSIPFLKQPANLDG-MVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPV--DAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLGGGVPFHA 696
            MS+S+PFL +PA LDG MVG++GFDPFGF++ +  K++RE+ELKHGRV MLA +G+IV E VH+P  A  + NPV  +A   V AG + QIFAF G +E   HN KM+   M  DG+ PG FGFDPL   K +   R RY+L E+KNGRLAM    G++H S + G G P +A
Sbjct:   41 MSQSVPFLPRPAALDGKMVGDVGFDPFGFSSKYDIKWLRESELKHGRVCMLASLGYIVQEFVHLPFEA--TSNPVGSEAFYQVPAGGLWQIFAFIGAIEHFSHNFKMSGSTMFSDGRTPGNFGFDPLGFGK-NPQARARYELAELKNGRLAMLGFSGMIHGSFITGKG-PINA 209
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A7S4DC05_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC05_HETAK)

HSP 1 Score: 164 bits (415), Expect = 1.160e-47
Identity = 80/133 (60.15%), Postives = 100/133 (75.19%), Query Frame = 1 
Query:  187 MSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQ-VPGEFGFDPLNLSKKSAS 582
            MSKS+PFL  P N  GM+G+ GFDPFGF+  F  K+MREAELKHGRV+MLAVVG++VS+ VH+PG AY S NP++A++ VG  P+ QIF FCGFLE+  + GKMTM +M ED +  PG  GFDP+NL K   S
Sbjct:   45 MSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNLGKGGPS 177
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A7S0T6N2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6N2_9RHOD)

HSP 1 Score: 165 bits (417), Expect = 1.540e-47
Identity = 85/169 (50.30%), Postives = 111/169 (65.68%), Query Frame = 1 
Query:  181 AVMSKSIPFLKQPANLD-GMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLGGGV 684
            A  S S+PFL +PAN+D  MVG  GFDP G +T   A+F++E+E+KHGR+ MLAVVG++V EVVH+PG  + ++   +A + V  G + QIF  CG  E+  H GKMT  ++  D   PG  GFDPLNL K     + ++QL EIKNGRLAM AIGG +HQ  L   GV
Sbjct:   31 AEKSASVPFLSKPANIDESMVGYTGFDPLGLSTYLSARFLQESEIKHGRICMLAVVGFLVQEVVHLPGEVFSAKLATEAFSKVPTGGLWQIFIACGVAEYIGHKGKMTYMDISADKGTPGAMGFDPLNLGKDPEKFK-KFQLNEIKNGRLAMIAIGGFIHQMWLTKQGV 198
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A1Z5JQG8_FISSO (Light-harvesting complex I chlorophyll a/b binding protein 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQG8_FISSO)

HSP 1 Score: 160 bits (405), Expect = 7.100e-46
Identity = 86/167 (51.50%), Postives = 117/167 (70.06%), Query Frame = 1 
Query:  181 AVMSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDG-QVPGEFGFDPLNLSK-KSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLG 675
            A MSKSIPFL  P N  G VG++GFDP GF+  F  K++RE+E+KH R AMLA +G++V + V +PG   + ++ + A AAVG  PMLQIF   G LE+  +NGK+T++NM  D  +VPG FGFDPL ++K KSA      +L+EIKNGRLAM AIGG++  +++ G
Sbjct:   30 AEMSKSIPFLTAPKNTAGWVGDVGFDPLGFSDYFDMKWLRESEIKHSRAAMLASLGFMVQQFVTLPGMPDVDDSML-APAAVGPSPMLQIFFGLGVLEFWSNNGKVTIENMFSDSSRVPGNFGFDPLGMAKGKSAEAMADMELKEIKNGRLAMCAIGGMMAHNIVTG 195
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A1X6NTR2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTR2_PORUM)

HSP 1 Score: 160 bits (406), Expect = 8.070e-46
Identity = 77/164 (46.95%), Postives = 108/164 (65.85%), Query Frame = 1 
Query:  181 AVMSKSIPFLKQPANLDG-MVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQLQEIKNGRLAMSAIGGLVHQSLL 669
            A  S S+PFL QPA  DG M G++GFDP   +     K++RE ELK+GRVAMLA +G +V E VH+P   + +    DA   V AG + Q+F  CG  E+  H GK++ D+M EDG++PG FGFDPL L K + + +++ +L E+KNGRLAM  IGG++H + +
Sbjct:   32 AARSASVPFLPQPAACDGSMAGDVGFDPLNLSGFIDIKWLREGELKNGRVAMLAFLGVLVQEFVHLPSPLFANPVATDAFFQVPAGGLWQVFLACGLCEFVSHRGKLSYDDMFEDGRIPGNFGFDPLGLYKGTPAQKKKLELAEVKNGRLAMIGIGGVIHSNFI 195
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BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Match: A0A7S1BY62_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BY62_9STRA)

HSP 1 Score: 160 bits (405), Expect = 8.240e-46
Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 1 
Query:  124 VDAVEPVXXXXXXXXXXXAAVMSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMREAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQIFAFCGFLEWKFHNGKMTMDNMHED-GQVPGEFGFDPLNLSK-KSASVRERYQLQEIKNGRLAMSAIGGLVHQSLLLG 675
            V A  P            +A MS+S+PFL  P N  G VG++GFDPF F+  F  K+MREAE+KHGR +MLA +G++  + + +PG  +++++ +    AVGAGPMLQI  + G LE   + G +TM+ M ED  +VPG FGFDP+ L+  KS    E  QL+E+KNGRLAM AIGG++H + + G
Sbjct:   16 VSAFAPASVSGTYSTTTLSAEMSQSVPFLLAPKNTKGWVGDVGFDPFSFSENFDMKWMREAEIKHGRTSMLATLGFVAQQYISLPGLPHIADSNLGP-TAVGAGPMLQIVLWMGVLEVWTNKGNITMETMFEDPDRVPGAFGFDPMGLAVGKSEEEMEEMQLKELKNGRLAMLAIGGMIHHNWVTG 200
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9813.17788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCR7_ECTSI1.280e-11575.85Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A835Z4D2_9STRA7.760e-7666.27Chlorophyll a/b-binding protein domain-containing ... [more]
A0A6V1U3D5_HETAK1.790e-6161.59Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
W7TJ16_9STRA5.420e-5456.36Light-harvesting protein n=1 Tax=Nannochloropsis g... [more]
L1IG53_GUITC5.160e-4852.60Light-harvesting Chl a protein 9 n=2 Tax=Guillardi... [more]
A0A7S4DC05_HETAK1.160e-4760.15Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A7S0T6N2_9RHOD1.540e-4750.30Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A1Z5JQG8_FISSO7.100e-4651.50Light-harvesting complex I chlorophyll a/b binding... [more]
A0A1X6NTR2_PORUM8.070e-4646.95Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1BY62_9STRA8.240e-4645.70Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9813contigS-dermatodea_contig9813:209..5834 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.8
Seed ortholog evalue1.2e-91
Seed eggNOG ortholog2880.D8LCR7
Preferred nameLhcr1
KEGG koko:K08907,ko:K08910
KEGG Pathwayko00196,map00196
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2D9V2@1,2S5EH@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Hectar predicted targeting categorychloroplast
Exons2
Model size699
Cds size699
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925432.6988738-CDS-S-dermatodea_contig9813:208..4181622925432.6988738-CDS-S-dermatodea_contig9813:208..418Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9813 209..418 -
1694079929.8170009-CDS-S-dermatodea_contig9813:208..4181694079929.8170009-CDS-S-dermatodea_contig9813:208..418Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9813 209..418 -
1622925432.7119367-CDS-S-dermatodea_contig9813:5345..58341622925432.7119367-CDS-S-dermatodea_contig9813:5345..5834Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9813 5346..5834 -
1694079929.830726-CDS-S-dermatodea_contig9813:5345..58341694079929.830726-CDS-S-dermatodea_contig9813:5345..5834Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9813 5346..5834 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9813.17788.1prot_S-dermatodea_contig9813.17788.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9813 209..5834 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9813.17788.1

>prot_S-dermatodea_contig9813.17788.1 ID=prot_S-dermatodea_contig9813.17788.1|Name=mRNA_S-dermatodea_contig9813.17788.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=233bp
MKVLSAVGAMTACASCASAFVTPALTRCSTTPSSAVRMSAAVDAVEPVAE
PPAEPVAPPAAVMSKSIPFLKQPANLDGMVGNIGFDPFGFATIFPAKFMR
EAELKHGRVAMLAVVGWIVSEVVHVPGAAYMSENPVDAMAAVGAGPMLQI
FAFCGFLEWKFHNGKMTMDNMHEDGQVPGEFGFDPLNLSKKSASVRERYQ
LQEIKNGRLAMSAIGGLVHQSLLLGGGVPFHA*
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mRNA from alignment at S-dermatodea_contig9813:209..5834-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9813.17788.1 ID=mRNA_S-dermatodea_contig9813.17788.1|Name=mRNA_S-dermatodea_contig9813.17788.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5626bp|location=Sequence derived from alignment at S-dermatodea_contig9813:209..5834- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAAGGTACTCTCGGCCGTAGGCGCGATGACCGCGTGCGCATCGTGCGC
CAGCGCCTTCGTAACCCCTGCTTTGACGCGGTGCTCCACGACCCCCAGCA
GCGCCGTACGCATGTCGGCCGCCGTCGATGCAGTCGAGCCCGTGGCGGAG
CCGCCCGCGGAGCCGGTCGCGCCGCCGGCCGCCGTGATGTCCAAGTCCAT
CCCTTTCTTGAAGCAGCCCGCGAACCTTGATGGCATGGTGGGCAACATCG
GCTTCGATCCCTTCGGGTTCGCCACGATTTTCCCGGCGAAGTTCATGCGG
GAGGCTGAGCTCAAGCACGGGAGGGTTGCGATGCTTGCTGTCGTTGGGTG
GATCGTGTCCGAGGTGGTGCACGTCCCTGGGGCGGCATACATGTCCGAGA
ACCCCGTGGACGCGATGGCGGCGGTTGGGGCCGGGCCTATGCTTCAGATC
TTCGCGTTCTGCGGGTTCCTCGAGTGGAAATTCCACAACGTGAGTTGTCG
TGTTGCTGCTGCTCTCTCTGTCTGCTGTGGTGCGTGCTGTCTGCTGAAAG
CTCCACATACATGTTGGTATATAAGTACCACATGATCCTTGAACAGAAAG
ACCTGTACTCGTATGTATTACAGAAGTAATATTGTTGTTATACCAAGTAC
ACAGGACGGCCTTCGGGTTACACTAAAACTACTGTATGTATCTATCATAT
GACCAGAGTATTATGTTATTGGGTATACAACCGAAATATGTCATCGTGTT
TATTTGCCGCACGCATGTTGAAATTGTGCATGATAAACATGTGTTCAGTG
TTCACTGCTGTGAATACTGTAGTACAGGAAACAGATTAGGCACGTCGCAA
ATCACGATCTTGGGGTAGGTTCTCGCCTTGGTCCATAAGCTGTCCTTATA
CCCGGACCTGTGACTGGTATTTTGGCTACAGTCAGTACCTTGTACACGAC
GACCATGGCTTGCGCACCAAGGATACCTGCTGCACAAGCAGACCTTAGGG
GATCGATTACTATAATACTATGGCCTGCCTTGTGCGTTGAATGATGATTG
CTTGATGTATGCTTGACTTGCACGCACTTTTTTCACTTTTAAAACGCGCC
ACGCACGCATGTATCGTTTGCATGATGCCTCCTCAGAATTACAGTACTGG
AGCCAAGTGTTCGTAATAACTCGGCCAACTGTTACAGTAGATTGCTGGAA
CACAGAGACAGAGTATTGCAGAGGGCTGAATATCACCGTCGAAATGACGC
GCTGCTGTTTGCTTTGGGGGGGGAAGGCAGAAAGATGGGCTTGGTTGTGG
GGTGATGCATATCGTGTGCAGTTAAAATGACAGGACAGCCGGTCGTAGCA
GTGACACTGCAATTATAGTGCAAGTTCCAACATCTGCCCAAAACCCGCTC
AACTCTCATCAGCACTTACTCATTCTGCGTAACCCAAACCCACTTTTTCC
AGTCACGTGAGCGAGCTCTCAATCGGGCCGTGGACGTTCAGCAAACAGCT
GCAGTTATAGTAATTATGTGCACGAGCTGCAAATATACAAACAGTCGCGC
ACTTCTGTGGACTGTCCACCGACATACCATATACTAAATTACAATCATAC
ACACGACTGACTACAATATTGCAAAGGGCAAACGCCGTTTGGGCTCGAGA
CCCCCCCCTCCCCCTCCGCCTCCCTGCCAAGCCGCCCCCGACCAGCATGT
TACACCCGCTTTTCAAATTCATGAGCGCCTTAATATGTACCTGGTACAGT
ACAGTAGTTGGTCAAGCTCGCGACGGTCGTGCTTACGTTTATTTAGTGAC
GTTATCATGGGAGATGATATGAAGCTCTCCGCCGTTGTTTGCTCACGTTG
CGTTGTAGCGTGCGGGGCACTTCCTGGGAGTCCATGCACAACATGCAGGC
AGCTATAATGCTGACAGTGACTTGAAGTGTGTCAACGGTCTGTTGACTGA
ATCATGATGTCTTCGTCTTTCCCCAACTCCTTCTCGGAGGCTTTTCGCAA
CATGCCCGAGATGCCGCTCTCCGAAACCCCATGCTGCGTTTTTTTTGCAC
CACGAAATCCACTCGACCTTGCCGTCCTGTGTGTAATCCCGTCAAAGTCG
ACGCCCGTCAAAACCGCGGCCTTCACACCTCGATGGCTTGGGTTATAATT
ACACTTCCATGGCTTGTGTCTACTCGCTCGAATAGGCGTGGTCGCGACGC
TGAGATCGAGTTTGCCGCCACAAACCGTGGGCTGGGGTTGGCAGCCGTGG
TCGGCAGTTTTTTTTTTTTTTTTTTGTGAAAACGTTTTACCAGTGTCTTG
TTTCGATTATATTCCCTTTTGAGACTTGAGCCTGTTTTCGGGGTTAGGCC
ATCGATCAGGTACAGTATGATACGGCAGTACCCGAACGGTGGCGTCTTCT
CGTCGCCGTATATATACAGTATACATCAGACAGTAGTATCATAGCCGCGG
GTGGAAAAGTGCTGGTAAACCTGCCACGCTCAGCTTGTAGGCACGATGGT
GCCCTCGTACGTGCGCCCGTCACGGCGATATGCTTTAGACTATAACAGTA
GTATAACCCATACTGTCTGTAGTCTGTAGTGACCATATTCGGCACAAAAA
CAGGCTCTTAATATTGATACTGACTTGCAGTAGTACTTGACTCGTCGAGG
AGCGTTCGTGGCGCTCACCCTTCGAAGAAGAAATTGGTGGGGCATTTGCG
CCTCAAGGCAAAAACGGCTGTTTTTTCACCCGTACGGGCCGATGAATCAC
TGAGGGCGGCTGTCATACACAATTGTATACTGTTTGTATTTGCACACCAG
AGAGCGGTCCCATAGCTCCACTCGAATTCAGCAGGTGTGTGAACATTGCA
TGAGGTGTCGTATCTTCATAGTTACGCTTTTGTATACCATGGAGCCTTCG
GGCCTTTTCCCAAATCAATCTTGAACTTGACATTCGTCTTGAAAATGGCT
GCGCATCCATGTAAATTTGACGCGGCGCAGTGCACTCTCGTGCCTATCAT
ACTGTTACACTACTGTTACAAAAGGCACCCCTGCGTTTGTTTGGTTTTCT
CGCTCTCGAATCAATGAGCTCCGCTCTCTAGGATAACCCTTTTGGGAGTG
AGCCTGTTTCCGGGGTTAGGCCATGTGTGCGCACCGTATATTTCACATGG
AACAGGTACAGTACCCGAACGGTGGCGACTCCTCCTCCGTACAGTACCGG
CGGTGGAGAAGTGGTGATAACCCTGCCGCGGTCGCTTAGCTTGCCTGCCC
TGCTGTGGTGGTGCACGTGTGAATATATATACAGTATATGTATATATACC
GCGCGCCCCGTGGTTGAACTGGTTCACCAACGTCTCACTAAGACGGAGGA
CCCGGGTAGAGTCGATATTTATATACGCTATATTACCTCCATCGCGGAAA
GCGCGACCGCGTGAGCAAGCAAAATCCGATAAATAGGCGAGAGCTGCGGG
AGTGCCGAACCCAATGCGCGATAAAAATCGAGCCCGGGGGCGCTGGTTTG
TGTTGAAGGTTTTACGCACCGAAGCCGCGCGGTTCACGTAGTGTGGCTCG
CCCGCGCACTTGATGTGTAGATGGCGAGGGTGAGGGCGAGAGCTTTTGTG
TTTAGTCGTTTTCACGTGCCACTCGCGTTTGAAGCGTTGCGTCTTGAAAC
CGCTTGAGCAAGTCAGCGCCTAGTGTTGGTTTTAGTCAAGCTCATCTCTC
GCCGCATTTTGTATGTCGATTTTGCAGCTTGAAATTGAACTAACTGACAG
TTGCGCTACACTTGAAAAGTATGATACACTTGTACTAGCAGAAAGTACAC
ATTGGCAGAGCTTGGATATGGCGGCCGTGTGTTGTATGTTTAGTTTAGTT
TTTTGGTTAAACGAGTACTTCCGATGCAGAGTAGCTCGCGGCGAGCTGCT
TCGTCAACGATTTCGGCCAGGTCGCTCGCGCAGAGTTATCTCGATGAAGC
TGCCCCCTCTCCTGCGCAGGGTTTCGACGTGTGTTTCTAGCGGGTTTCTA
GCGGGTGTACGCATTCGCTGTTAATAGTTCAGATTAAATAGCAAAGGTAG
GAGAGTATAGTCTGCCGTCTCAGAAGTTTCCATCCAATATAATTCATATG
TGATGTGCGATGTACATGGGACATGAATTGTGTCTACCTCGGGCCTCAAA
TCGGCATATAAAGCGGAGTCTGATGGAACACAGCAGTCTACTATACTACA
CAAGGGACGCTTCATTTTATTTGTGCTTTCGTTGGGGGGTGAGTGATTGA
AGATTGTCCTGTATTGTACATCGGCATGCAATCATTATCGTTCTGCTTTC
TTATATATTTGGGTGGTTCTCTGTGCATAACGCAAGGACACGCTCACTGC
TGTACAGGATTCATATCGTGCTGGGTTGAGGGACACCACTTTGTGTGTGT
TTATGTGTCTGGCGCACATGCGACTGATGGCCCTTATCCGAATCTGTTAT
ATACACCTTGTGGCCAAGAGGAATCATACGGCTTCTCCCGAGCACGCGCC
TGGACTCTTTGCGCGCGTTGGGTTAGGCACTTCCGCGTCCAGCCGTTTTT
TCGGTTTTTAAGTTGCCCCCATTCACGTTATATCCCTTTCCGCGACAGAG
CAGAGCAAGGTTACATAATTCTGATTTGGCGGAAATTGGACACACAAAGC
CCTCAGTCTGATCGAATGTTGGGTTATGACCAGCTGAACCCGTTTGAATC
GCGCTTCTTTTACAATTAGTTCGAGAGCAGTTAAGGTCTCCTCTTGACTT
TTGGGGAACGAAAGCAAAACTACGCGAACGAAAAAAACAGGGCGCTCGAG
GCCGTGCAACTAACTGACTCTCCAACGAGTCATCGGCTCTTTACTTTGCA
AGAGACCAGTTGCAGAAGAGCGCACGCCATGGCAACTTTTTGCTTTACCA
AGACGAAATATGGCGATTTCTTTGCAGGGTGATTGGCAATACACCCCAAG
CGCAGCGCGGTGTGGAGCTATAAACTCGCACGGACAGCGCCAAGCAATCG
CCGCACCCGCCATGCTTCCCTTACCAAAGCAAAAGGACGATTCCTCACCC
CACGACGGGTGCAAGCACCAACAGACAAGGTGGTTCAATACTCCCAGCTA
CCGAAACCTGCGCTTGCAGCCGCCGCAGCCCACGACCACCTACTTGTTTT
GATATTTATACAGCTCAGATACCCTCCGGGTCGTGAGTAGATGCGGAATC
CTATCCTGAGTCCGGGAACCGCGACTTTCCGCCCCAAAAATATAAGGATT
TCAAGCACACATGGAGCGAGTGTTGGCGTCCCACCTTTTCAAAACGGAAG
ATAATCCAAGCTATCACACACATATGGCATGGAGGCTCACTTGTTGCGTA
TGATGCTATGGCCTCCTTTCTCATGACCCCCACCCCCCCTCTGCCGTCTG
GAAAAACGCCGAGCAGGGTAAGATGACCATGGACAACATGCACGAGGACG
GTCAGGTGCCCGGGGAGTTCGGGTTCGACCCGCTGAACCTTTCCAAAAAG
TCCGCGAGTGTCCGCGAGAGGTACCAGTTGCAGGAGATCAAGAATGGCCG
CCTGGCCATGTCCGCCATCGGCGGGCTCGTGCACCAGTCCCTCCTCCTTG
GCGGCGGTGTTCCGTTCCACGCGTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9813:209..5834-

>mRNA_S-dermatodea_contig9813.17788.1 ID=mRNA_S-dermatodea_contig9813.17788.1|Name=mRNA_S-dermatodea_contig9813.17788.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1398bp|location=Sequence derived from alignment at S-dermatodea_contig9813:209..5834- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAAGGTACTCTCGGCCGTAGGCGCGATGACCGCGTGCGCATCGTGCGC
CAGCGCCTTCGTAACCCCTGCTTTGACGCGGTGCTCCACGACCCCCAGCA
GCGCCGTACGCATGTCGGCCGCCGTCGATGCAGTCGAGCCCGTGGCGGAG
CCGCCCGCGGAGCCGGTCGCGCCGCCGGCCGCCGTGATGTCCAAGTCCAT
CCCTTTCTTGAAGCAGCCCGCGAACCTTGATGGCATGGTGGGCAACATCG
GCTTCGATCCCTTCGGGTTCGCCACGATTTTCCCGGCGAAGTTCATGCGG
GAGGCTGAGCTCAAGCACGGGAGGGTTGCGATGCTTGCTGTCGTTGGGTG
GATCGTGTCCGAGGTGGTGCACGTCCCTGGGGCGGCATACATGTCCGAGA
ACCCCGTGGACGCGATGGCGGCGGTTGGGGCCGGGCCTATGCTTCAGATC
TTCGCGTTCTGCGGGTTCCTCGAGTGGAAATTCCACAACATGAAGGTACT
CTCGGCCGTAGGCGCGATGACCGCGTGCGCATCGTGCGCCAGCGCCTTCG
TAACCCCTGCTTTGACGCGGTGCTCCACGACCCCCAGCAGCGCCGTACGC
ATGTCGGCCGCCGTCGATGCAGTCGAGCCCGTGGCGGAGCCGCCCGCGGA
GCCGGTCGCGCCGCCGGCCGCCGTGATGTCCAAGTCCATCCCTTTCTTGA
AGCAGCCCGCGAACCTTGATGGCATGGTGGGCAACATCGGCTTCGATCCC
TTCGGGTTCGCCACGATTTTCCCGGCGAAGTTCATGCGGGAGGCTGAGCT
CAAGCACGGGAGGGTTGCGATGCTTGCTGTCGTTGGGTGGATCGTGTCCG
AGGTGGTGCACGTCCCTGGGGCGGCATACATGTCCGAGAACCCCGTGGAC
GCGATGGCGGCGGTTGGGGCCGGGCCTATGCTTCAGATCTTCGCGTTCTG
CGGGTTCCTCGAGTGGAAATTCCACAACGGTAAGATGACCATGGACAACA
TGCACGAGGACGGTCAGGTGCCCGGGGAGTTCGGGTTCGACCCGCTGAAC
CTTTCCAAAAAGTCCGCGAGTGTCCGCGAGAGGTACCAGTTGCAGGAGAT
CAAGAATGGCCGCCTGGCCATGTCCGCCATCGGCGGGCTCGTGCACCAGT
CCCTCCTCCTTGGCGGCGGTGTTCCGTTCCACGCGTAGGGTAAGATGACC
ATGGACAACATGCACGAGGACGGTCAGGTGCCCGGGGAGTTCGGGTTCGA
CCCGCTGAACCTTTCCAAAAAGTCCGCGAGTGTCCGCGAGAGGTACCAGT
TGCAGGAGATCAAGAATGGCCGCCTGGCCATGTCCGCCATCGGCGGGCTC
GTGCACCAGTCCCTCCTCCTTGGCGGCGGTGTTCCGTTCCACGCGTAG
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