prot_S-dermatodea_contig9808.17784.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9808.17784.1
Unique Nameprot_S-dermatodea_contig9808.17784.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length214
Homology
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BLAST of mRNA_S-dermatodea_contig9808.17784.1 vs. uniprot
Match: D7FR40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR40_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 8.380e-62
Identity = 112/157 (71.34%), Postives = 130/157 (82.80%), Query Frame = 0 
Query:   58 LEEATSSAVGKRRTVKMPEAPPDLDTLQLQTENQRRRALPLSRLKRVKPKRRIVADEE-GEFRPLVAKTDRQSVLRGEDYWIDYREVDAKAARKEARAKAPAADQFAQSKIRAEISNPYKQNWILVISMAIVAVAGFIRINPAILDNPTLITFPTEL 213
            L+EAT     KR   +M +APP L++LQ  TENQRRRALPLS+LKRVKPK+R   +EE GE RPLV KTDR+SVLRGEDYWIDYREVD K A +EA+AKAPA DQFAQSK++AEI NPYKQNWIL IS+AIVA+AGF+RINP ILD+P +ITFP EL
Sbjct:  131 LQEATR-VTPKRMQGRMAQAPPGLESLQ--TENQRRRALPLSKLKRVKPKKRAAKEEEEGEIRPLVLKTDRESVLRGEDYWIDYREVDRKKAIREAKAKAPAPDQFAQSKMKAEIVNPYKQNWILAISLAIVAIAGFVRINPGILDDPAIITFPNEL 284
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9808.17784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR40_ECTSI8.380e-6271.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..178
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.706
NoneNo IPR availableTMHMMTMhelixcoord: 179..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9808contigS-dermatodea_contig9808:3852..6825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9808.17784.1mRNA_S-dermatodea_contig9808.17784.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9808 2935..6878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9808.17784.1 ID=prot_S-dermatodea_contig9808.17784.1|Name=mRNA_S-dermatodea_contig9808.17784.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=214bp
MVFRSRATALVCLVAASFAPCAKGTTGFVAARASLFSHRSAVRGAARMAL
NDGADGALEEATSSAVGKRRTVKMPEAPPDLDTLQLQTENQRRRALPLSR
LKRVKPKRRIVADEEGEFRPLVAKTDRQSVLRGEDYWIDYREVDAKAARK
EARAKAPAADQFAQSKIRAEISNPYKQNWILVISMAIVAVAGFIRINPAI
LDNPTLITFPTEL*
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