prot_S-dermatodea_contig9787.17766.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9787.17766.1
Unique Nameprot_S-dermatodea_contig9787.17766.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length389
Homology
BLAST of mRNA_S-dermatodea_contig9787.17766.1 vs. uniprot
Match: D7FM87_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM87_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 1.320e-79
Identity = 196/312 (62.82%), Postives = 215/312 (68.91%), Query Frame = 0
Query:   54 ARARNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGRKAGEERPAPKGAVEEVPGSTSVGTYLQESLGFLSQKP--GDWPTGKAPASAAAGAAAGARTMGTGPSLGMAFLSGLCAADNGALDIGPGETVDVSDIPASPPTVTPTGGVSTPSGGLSKAEPFTVDADDGDGCRETAAVTAAVAAFGIQSETEDDDAPRSENAADGDVRHVRFVDQTGVVLEAGRESDEXXXXXXXXXXXXXXXXXXXXXXXXELGAGGREEVARVLSERFMAGEEAGVNYQDVDGDERLDDLDQLARDEEDRWFRGQGDDG 363
            AR RNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVG+ AGEE+PAPK AVEEVPGSTSVGTYLQESLGFLSQK   G WPTG  P S A              SLGMAFLSG+CA D GA D+  GETVD SD+P +  +      V   SG     E    + DD D     AAVTAAV A G+Q     DD  +    AD D R VRF D+ G     G     XXXXXXXXXXXXXXXXXXXXXXXX     GREEVAR+LSERF+AG E GV+Y+ VDGDERLDDLDQL+RDE+DRWF G+ +DG
Sbjct:  195 ARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKHAGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQKQPNGGWPTGL-PTSGAGAGXXXXXXXXXXTSLGMAFLSGVCA-DAGARDVAAGETVDSSDVPEAASSQAEVTAVPIASGMPDGRERHACE-DDVDA--RAAAVTAAVGAIGLQ-----DDGKK----ADVDGRRVRFSDEMGSDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----GREEVARILSERFLAGLEQGVDYRSVDGDERLDDLDQLSRDEQDRWFLGEEEDG 487          
BLAST of mRNA_S-dermatodea_contig9787.17766.1 vs. uniprot
Match: UPI0019D51158 (coiled-coil domain-containing protein 97-like isoform X2 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D51158)

HSP 1 Score: 57.8 bits (138), Expect = 9.030e-6
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   24 AALAALSPPYPRPAGVRRPRGGRSPCPPDGARARNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGR 93
            AA  ALSP Y     +RR R   +  PP  AR RNRR   L +L   G +FS+EAM+ER+P+L  EY+GR
Sbjct:   69 AAFDALSPDYEVDWHLRRLRAAAAGAPPPAARVRNRRRAYLDRLVREGDYFSEEAMREREPYLHHEYLGR 138          
BLAST of mRNA_S-dermatodea_contig9787.17766.1 vs. uniprot
Match: F2TWH5_SALR5 (DUF2052 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWH5_SALR5)

HSP 1 Score: 57.8 bits (138), Expect = 1.020e-5
Identity = 25/37 (67.57%), Postives = 32/37 (86.49%), Query Frame = 0
Query:   57 RNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGR 93
            RNRRYRR+QQL + G +FS+EAMKER PWL+ ++VGR
Sbjct:   92 RNRRYRRMQQLLQEGTFFSEEAMKERCPWLYDQFVGR 128          
BLAST of mRNA_S-dermatodea_contig9787.17766.1 vs. uniprot
Match: K3XYB0_SETIT (DUF2052 domain-containing protein n=8 Tax=Panicoideae TaxID=147369 RepID=K3XYB0_SETIT)

HSP 1 Score: 56.6 bits (135), Expect = 2.810e-5
Identity = 33/70 (47.14%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   24 AALAALSPPYPRPAGVRRPRGGRSPCPPDGARARNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGR 93
            AA  ALSP Y     +RR R   +  PP  A+ RNRR   L +L   G +FS+EAM+ER+P+L  EY+GR
Sbjct:   72 AAFDALSPDYEVDWHLRRLRAAAAGAPPPAAQVRNRRRAYLDRLVREGEYFSEEAMREREPYLHHEYLGR 141          
BLAST of mRNA_S-dermatodea_contig9787.17766.1 vs. uniprot
Match: A0A2T7E370_9POAL (DUF2052 domain-containing protein n=5 Tax=Paniceae TaxID=147428 RepID=A0A2T7E370_9POAL)

HSP 1 Score: 56.6 bits (135), Expect = 2.830e-5
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 0
Query:   24 AALAALSPPYPRPAGVRRPRGGRSPCPPDGARARNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGR 93
            AA  ALSP Y     +RR R   +  PP   R RNRR   L +L   G +FS+EAM+ER+P+L  EY+GR
Sbjct:   69 AAFDALSPDYEVDWHLRRLRAAAAGAPPPAVRVRNRRRAYLDRLVREGEYFSEEAMREREPYLHHEYLGR 138          
BLAST of mRNA_S-dermatodea_contig9787.17766.1 vs. uniprot
Match: C4JBK7_MAIZE (DUF2052 domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=C4JBK7_MAIZE)

HSP 1 Score: 55.5 bits (132), Expect = 5.170e-5
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   24 AALAALSPPYPRPAGVRRPRGGRSPCPPDGARARNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGR 93
            AA  ALSP Y     +RR R   +  PP  +R RNRR   L +L   G +FS++AM+ER+P+L  EY+GR
Sbjct:   73 AAFDALSPDYEVDWHLRRLRAAAAGAPPPASRVRNRRRAFLDRLVREGEYFSEDAMREREPYLHHEYLGR 142          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9787.17766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FM87_ECTSI1.320e-7962.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0019D511589.030e-648.57coiled-coil domain-containing protein 97-like isof... [more]
F2TWH5_SALR51.020e-567.57DUF2052 domain-containing protein n=1 Tax=Salpingo... [more]
K3XYB0_SETIT2.810e-547.14DUF2052 domain-containing protein n=8 Tax=Panicoid... [more]
A0A2T7E370_9POAL2.830e-547.14DUF2052 domain-containing protein n=5 Tax=Paniceae... [more]
C4JBK7_MAIZE5.170e-545.71DUF2052 domain-containing protein n=1 Tax=Zea mays... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 286..306
IPR040233Domain of unknown function DUF2052PFAMPF09747DUF2052coord: 245..356
e-value: 4.0E-12
score: 46.7
coord: 58..99
e-value: 3.6E-9
score: 37.1
IPR018613Ccdc97-likePANTHERPTHR31840FAMILY NOT NAMEDcoord: 53..358

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9787contigS-dermatodea_contig9787:172..3579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9787.17766.1mRNA_S-dermatodea_contig9787.17766.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9787 76..5277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9787.17766.1 ID=prot_S-dermatodea_contig9787.17766.1|Name=mRNA_S-dermatodea_contig9787.17766.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=389bp
MSQQQPPKLDDADDVDMPPATASAALAALSPPYPRPAGVRRPRGGRSPCP
PDGARARNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGRKAGEERP
APKGAVEEVPGSTSVGTYLQESLGFLSQKPGDWPTGKAPASAAAGAAAGA
RTMGTGPSLGMAFLSGLCAADNGALDIGPGETVDVSDIPASPPTVTPTGG
VSTPSGGLSKAEPFTVDADDGDGCRETAAVTAAVAAFGIQSETEDDDAPR
SENAADGDVRHVRFVDQTGVVLEAGRESDEEDDDAMQEDEGEEEEEEEEE
EEEDELGAGGREEVARVLSERFMAGEEAGVNYQDVDGDERLDDLDQLARD
EEDRWFRGQGDDGIAEDPIYSEQDQFNKSLTFKSSILP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040233DUF2052
IPR018613Ccdc97-like