prot_S-dermatodea_contig97823.17764.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig97823.17764.1
Unique Nameprot_S-dermatodea_contig97823.17764.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length59
Homology
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: D7FU41_ECTSI (Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU41_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 6.830e-26
Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0
Query:    3 QAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAGKVS 56
            +AVAKSKYEEN+FP NHT+VWGSYFD RSMRWGF CCHSLT KSYCTGE GKV+
Sbjct:  465 KAVAKSKYEENVFPSNHTSVWGSYFDKRSMRWGFSCCHSLTFKSYCTGEEGKVA 518          
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: J5T247_TRIAS (Pre-mRNA-splicing factor SLU7 n=2 Tax=Trichosporon asahii var. asahii TaxID=189963 RepID=J5T247_TRIAS)

HSP 1 Score: 90.9 bits (224), Expect = 6.090e-20
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 RSQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAGK 54
            + QA AKSKY E++FP NHT+VWGS++D  S +WGF CCHSL ++SYCTGEAGK
Sbjct:  375 QEQAKAKSKYPEDVFPNNHTSVWGSWYDRESGQWGFACCHSLIARSYCTGEAGK 428          
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: A0A5M6C9K8_9TREE (Pre-mRNA-splicing factor SLU7 n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6C9K8_9TREE)

HSP 1 Score: 90.5 bits (223), Expect = 8.480e-20
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 RSQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAGK 54
            R +A A+SKYEE+IF  NHT VWGSY+D+ + +WG+GCCHS+ S SYCTGEAGK
Sbjct:  386 REKAKARSKYEEDIFVNNHTCVWGSYYDIETSQWGYGCCHSILSGSYCTGEAGK 439          
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: A0A1B9GR03_9TREE (Pre-mRNA-splicing factor SLU7 n=2 Tax=Kwoniella heveanensis TaxID=89924 RepID=A0A1B9GR03_9TREE)

HSP 1 Score: 90.1 bits (222), Expect = 1.160e-19
Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    1 RSQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAGKVS 56
            R +A  +SKYEE+++  NHT VWGSY+D++S  WGFGCCHSL S SYCTGEAGK +
Sbjct:  386 REKAKVRSKYEEDVYINNHTAVWGSYYDVQSGAWGFGCCHSLISGSYCTGEAGKAA 441          
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: A0A1A6A3B6_9TREE (Pre-mRNA-splicing factor SLU7 n=2 Tax=Kwoniella TaxID=490731 RepID=A0A1A6A3B6_9TREE)

HSP 1 Score: 89.0 bits (219), Expect = 2.970e-19
Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 RSQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAGKVS 56
            R +AVA+SKY+E+++  NHT +WGSY+D+ + +WGF CCHSL S SYCTGEAGK +
Sbjct:  387 REKAVARSKYDEDVYINNHTAIWGSYYDISNGQWGFACCHSLLSGSYCTGEAGKTA 442          
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: A0A1B9G0P2_9TREE (Pre-mRNA-splicing factor SLU7 n=2 Tax=Kwoniella TaxID=490731 RepID=A0A1B9G0P2_9TREE)

HSP 1 Score: 88.6 bits (218), Expect = 4.020e-19
Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 RSQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAGK 54
            R +AV +SKY+E+++  NHT++WGSY+D+ S  WG+GCCHSL S SYCTGEAGK
Sbjct:  390 RERAVPRSKYDEDVYINNHTSIWGSYYDLSSGTWGYGCCHSLISGSYCTGEAGK 443          
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: A0A836CLD5_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.090e-19
Identity = 33/55 (60.00%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    2 SQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAGKVS 56
            +QAVA+SKYEE++ PGNH +VWGSY++ R+ RWGF CCH+L+  +YCTG AG+ +
Sbjct:  431 AQAVARSKYEEDVVPGNHASVWGSYYERRAGRWGFACCHALSRAAYCTGAAGRAA 485          
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: UPI001905E684 (pre-mRNA-splicing factor SLU7 n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI001905E684)

HSP 1 Score: 87.4 bits (215), Expect = 1.030e-18
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 RSQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAG 53
            R +A A+S+Y+EN++PGNHT+VWGS++D+ S +WGF CCHS  S SYCTG AG
Sbjct:  383 RERAKARSRYDENVYPGNHTSVWGSWYDLSSGKWGFACCHSSISNSYCTGAAG 435          
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: A0A2S4UIR4_9BASI (Pre-mRNA-splicing factor SLU7 (Fragment) n=2 Tax=Puccinia striiformis TaxID=27350 RepID=A0A2S4UIR4_9BASI)

HSP 1 Score: 85.9 bits (211), Expect = 3.630e-18
Identity = 32/53 (60.38%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 RSQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAG 53
            + +A AKSKY+E+++PGNH +VWGS++D++ M WGF CCHS T  SYCTG+AG
Sbjct:  444 QERAKAKSKYDEDVYPGNHISVWGSWYDIKKMIWGFSCCHSTTKHSYCTGKAG 496          
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Match: SLU7_YARLI (Pre-mRNA-splicing factor SLU7 n=3 Tax=Yarrowia lipolytica TaxID=4952 RepID=SLU7_YARLI)

HSP 1 Score: 85.5 bits (210), Expect = 3.770e-18
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    2 SQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTGEAGK 54
            +Q +A SKYEE++FPGNHT+VWGSY+D  + +WG+ CCH L    YC GE GK
Sbjct:  355 AQGIAVSKYEEDVFPGNHTSVWGSYYDKETAKWGYACCHCLIKNGYCVGEKGK 407          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig97823.17764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU41_ECTSI6.830e-2683.33Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus T... [more]
J5T247_TRIAS6.090e-2066.67Pre-mRNA-splicing factor SLU7 n=2 Tax=Trichosporon... [more]
A0A5M6C9K8_9TREE8.480e-2066.67Pre-mRNA-splicing factor SLU7 n=1 Tax=Kwoniella sh... [more]
A0A1B9GR03_9TREE1.160e-1964.29Pre-mRNA-splicing factor SLU7 n=2 Tax=Kwoniella he... [more]
A0A1A6A3B6_9TREE2.970e-1960.71Pre-mRNA-splicing factor SLU7 n=2 Tax=Kwoniella Ta... [more]
A0A1B9G0P2_9TREE4.020e-1962.96Pre-mRNA-splicing factor SLU7 n=2 Tax=Kwoniella Ta... [more]
A0A836CLD5_9STRA4.090e-1960.00Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema mi... [more]
UPI001905E6841.030e-1862.26pre-mRNA-splicing factor SLU7 n=1 Tax=Cantharellus... [more]
A0A2S4UIR4_9BASI3.630e-1860.38Pre-mRNA-splicing factor SLU7 (Fragment) n=2 Tax=P... [more]
SLU7_YARLI3.770e-1858.49Pre-mRNA-splicing factor SLU7 n=3 Tax=Yarrowia lip... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021715Pre-mRNA-splicing factor SLU7 domainPFAMPF11708Slu7coord: 2..25
e-value: 8.4E-7
score: 29.0
IPR039974Pre-mRNA-splicing factor SLU7PANTHERPTHR12942STEP II SPLICING FACTOR SLU7coord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig97823contigS-dermatodea_contig97823:266..442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig97823.17764.1mRNA_S-dermatodea_contig97823.17764.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig97823 266..442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig97823.17764.1 ID=prot_S-dermatodea_contig97823.17764.1|Name=mRNA_S-dermatodea_contig97823.17764.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=59bp
RSQAVAKSKYEENIFPGNHTTVWGSYFDMRSMRWGFGCCHSLTSKSYCTG
EAGKVSLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021715Slu7_dom
IPR039974Splicing_factor_SLU7