prot_S-dermatodea_contig9762.17748.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9762.17748.1
Unique Nameprot_S-dermatodea_contig9762.17748.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length58
Homology
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 5.010e-26
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSI+LRELIRAVRACKTAAEERGVVAQECARIRTAFKEED EFRNRNVAKLLFIHMLG
Sbjct:    1 MSIRLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDTEFRNRNVAKLLFIHMLG 58          
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: A0A482RW17_9ARCH (Adaptin_N domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RW17_9ARCH)

HSP 1 Score: 93.6 bits (231), Expect = 4.380e-22
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLR+LIRAVRACKTAAEER V+++ECA IRTA KEED +FR RNVAKLLFIHMLG
Sbjct:    1 MSIKLRDLIRAVRACKTAAEERAVISKECALIRTAIKEEDEQFRQRNVAKLLFIHMLG 58          
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: A0A812MR36_SYMPI (Ap1g1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812MR36_SYMPI)

HSP 1 Score: 95.1 bits (235), Expect = 1.790e-21
Identity = 47/58 (81.03%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR++RACKTAAEER V+A+ECA IRTAFKE+D +FR+RNVAKLLFIHM+G
Sbjct:    1 MSIKLRELIRSIRACKTAAEERAVIARECALIRTAFKEDDNQFRHRNVAKLLFIHMMG 58          
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: A0A813L6Y0_POLGL (AP-1 complex subunit gamma n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813L6Y0_POLGL)

HSP 1 Score: 95.1 bits (235), Expect = 1.980e-21
Identity = 47/58 (81.03%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR++RACKTAAEER V+A+ECA IRTAFKE+D +FR+RNVAKLLFIHM+G
Sbjct:    1 MSIKLRELIRSIRACKTAAEERAVIARECALIRTAFKEDDNQFRHRNVAKLLFIHMMG 58          
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: A0A1Q9EJ89_SYMMI (AP-1 complex subunit gamma-1 n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EJ89_SYMMI)

HSP 1 Score: 95.1 bits (235), Expect = 1.990e-21
Identity = 47/58 (81.03%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR++RACKTAAEER V+A+ECA IRTAFKE+D +FR+RNVAKLLFIHM+G
Sbjct: 2401 MSIKLRELIRSIRACKTAAEERAVIARECALIRTAFKEDDNQFRHRNVAKLLFIHMMG 2458          
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: A0A0G4ELK5_VITBC (AP-1 complex subunit gamma n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ELK5_VITBC)

HSP 1 Score: 94.7 bits (234), Expect = 2.700e-21
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR +RACKTAAEER V+A+ECA IRTAFKEED  +R+RNVAKLLFIHMLG
Sbjct:    1 MSIKLRELIRNIRACKTAAEERAVIAKECAEIRTAFKEEDNHYRHRNVAKLLFIHMLG 58          
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: A0A7S1F0P5_NOCSC (AP-1 complex subunit gamma n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F0P5_NOCSC)

HSP 1 Score: 94.0 bits (232), Expect = 5.030e-21
Identity = 46/58 (79.31%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKLRELIR++R+CKTAAEER V+A+ECA IRTAFKE+D +FR+RNVAKLLFIHM+G
Sbjct:   20 MSIKLRELIRSIRSCKTAAEERSVIARECALIRTAFKEDDNQFRHRNVAKLLFIHMMG 77          
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: A0A0G4HF14_9ALVE (Adaptin_N domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HF14_9ALVE)

HSP 1 Score: 88.6 bits (218), Expect = 9.700e-21
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MS KLR+L+RAVR CKTAAEERGV+A+ECA IRT FK+E   +R+RNVAKLLFIHMLG
Sbjct:    1 MSQKLRDLVRAVRGCKTAAEERGVIAKECAMIRTTFKDESDSYRHRNVAKLLFIHMLG 58          
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: A0A662XRJ5_9STRA (Adaptin_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRJ5_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.670e-20
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MS KLR+LIR+VRACKTAAEER V+A+E A IRTAFK++D ++R+RNVAKLLFIHMLG
Sbjct:    1 MSQKLRDLIRSVRACKTAAEERAVIAKESALIRTAFKDQDKQYRHRNVAKLLFIHMLG 58          
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Match: A0A836CEJ3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ3_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.750e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAKLLFIHMLG 58
            MSIKL+ELIRAVRACKTAA ER VV+QE A IRTAFKEE +E+RNRNVAKLLF+HMLG
Sbjct:    1 MSIKLKELIRAVRACKTAAAERSVVSQELALIRTAFKEEQLEYRNRNVAKLLFMHMLG 58          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9762.17748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHP4_ECTSI5.010e-2696.55AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A482RW17_9ARCH4.380e-2282.76Adaptin_N domain-containing protein (Fragment) n=1... [more]
A0A812MR36_SYMPI1.790e-2181.03Ap1g1 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A813L6Y0_POLGL1.980e-2181.03AP-1 complex subunit gamma n=2 Tax=Polarella glaci... [more]
A0A1Q9EJ89_SYMMI1.990e-2181.03AP-1 complex subunit gamma-1 n=2 Tax=Symbiodinium ... [more]
A0A0G4ELK5_VITBC2.700e-2182.76AP-1 complex subunit gamma n=2 Tax=Vitrella brassi... [more]
A0A7S1F0P5_NOCSC5.030e-2179.31AP-1 complex subunit gamma n=1 Tax=Noctiluca scint... [more]
A0A0G4HF14_9ALVE9.700e-2175.86Adaptin_N domain-containing protein n=1 Tax=Chrome... [more]
A0A662XRJ5_9STRA1.670e-2075.86Adaptin_N domain-containing protein n=1 Tax=Nothop... [more]
A0A836CEJ3_9STRA1.750e-2082.76AP-1 complex subunit gamma n=1 Tax=Tribonema minus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..58
e-value: 2.2E-19
score: 71.2
NoneNo IPR availablePANTHERPTHR22780:SF5ADAPTOR PROTEIN COMPLEX 1, GAMMA SUBUNIT, ISOFORM Dcoord: 2..58
NoneNo IPR availablePANTHERPTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONcoord: 2..58
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 5..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9762contigS-dermatodea_contig9762:6578..6751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9762.17748.1mRNA_S-dermatodea_contig9762.17748.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9762 6578..6751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9762.17748.1 ID=prot_S-dermatodea_contig9762.17748.1|Name=mRNA_S-dermatodea_contig9762.17748.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=58bp
MSIKLRELIRAVRACKTAAEERGVVAQECARIRTAFKEEDIEFRNRNVAK
LLFIHMLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold