prot_S-dermatodea_contig97617.17747.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig97617.17747.1
Unique Nameprot_S-dermatodea_contig97617.17747.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length50
Homology
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: A0A7J6SJT1_PEROL (DNA-directed DNA polymerase alpha catalytic subunit pol1 (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SJT1_PEROL)

HSP 1 Score: 90.5 bits (223), Expect = 8.250e-22
Identity = 41/50 (82.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN 50
            GPRRKKAAYAGGLVLEPK GLYD+ +LLLDFNSLYPS+I+EYN+CFTT++
Sbjct:  111 GPRRKKAAYAGGLVLEPKAGLYDKLVLLLDFNSLYPSIIREYNICFTTVD 160          
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: A0A0L0DRB9_THETB (DNA polymerase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DRB9_THETB)

HSP 1 Score: 94.0 bits (232), Expect = 3.540e-21
Identity = 43/49 (87.76%), Postives = 48/49 (97.96%), Query Frame = 0
Query:    1 GPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTM 49
            GPRRKKAAYAGGLVLEPK+G YD++ILLLDFNSLYPS+IQEYNLCFTT+
Sbjct:  940 GPRRKKAAYAGGLVLEPKRGFYDKFILLLDFNSLYPSIIQEYNLCFTTV 988          
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: A0A8J8T8Z7_HALGN (DNA polymerase n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8T8Z7_HALGN)

HSP 1 Score: 91.3 bits (225), Expect = 3.140e-20
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    1 GPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN 50
            GP+RKKAAYAGGLV+EPK G YD  ILLLDFNSLYPS+IQEYNLCFTT+N
Sbjct:  827 GPKRKKAAYAGGLVIEPKAGFYDSIILLLDFNSLYPSIIQEYNLCFTTVN 876          
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: A0A8J6CAH7_DIALT (DNA polymerase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CAH7_DIALT)

HSP 1 Score: 90.9 bits (224), Expect = 4.280e-20
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 0
Query:    2 PRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTM 49
            P RKK AYAGGLVLEPKKGLYD Y+LLLDFNSLYPS++QEYNLCFTT+
Sbjct:  980 PARKKPAYAGGLVLEPKKGLYDHYVLLLDFNSLYPSIVQEYNLCFTTV 1027          
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: D7FI10_ECTSI (DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 4.280e-20
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    8 AYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN 50
            AYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN
Sbjct:  957 AYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN 999          
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: UPI0006266BE4 (DNA polymerase alpha catalytic subunit n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI0006266BE4)

HSP 1 Score: 90.9 bits (224), Expect = 4.280e-20
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    2 PRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTM 49
            PRRKKAAYAGGLVLEPKKG YD+ ILL+DFNSLYPS+IQEYNLCFTT+
Sbjct:  865 PRRKKAAYAGGLVLEPKKGFYDKLILLMDFNSLYPSIIQEYNLCFTTV 912          
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: A0A7J6PM48_PEROL (DNA polymerase n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PM48_PEROL)

HSP 1 Score: 90.5 bits (223), Expect = 5.850e-20
Identity = 41/50 (82.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN 50
            GPRRKKAAYAGGLVLEPK GLYD+ +LLLDFNSLYPS+I+EYN+CFTT++
Sbjct: 1033 GPRRKKAAYAGGLVLEPKAGLYDKLVLLLDFNSLYPSIIREYNICFTTVD 1082          
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: A0A7J6MSZ3_PEROL (DNA polymerase n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MSZ3_PEROL)

HSP 1 Score: 90.5 bits (223), Expect = 5.850e-20
Identity = 41/50 (82.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN 50
            GPRRKKAAYAGGLVLEPK GLYD+ +LLLDFNSLYPS+I+EYN+CFTT++
Sbjct:  892 GPRRKKAAYAGGLVLEPKAGLYDKLVLLLDFNSLYPSIIREYNICFTTVD 941          
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: A0A7J6LTY8_PERCH (DNA polymerase n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LTY8_PERCH)

HSP 1 Score: 90.5 bits (223), Expect = 5.850e-20
Identity = 41/50 (82.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN 50
            GPRRKKAAYAGGLVLEPK GLYD+ +LLLDFNSLYPS+I+EYN+CFTT++
Sbjct:  882 GPRRKKAAYAGGLVLEPKAGLYDKLVLLLDFNSLYPSIIREYNICFTTVD 931          
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Match: A0A7J6QV35_PEROL (DNA-directed DNA polymerase n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QV35_PEROL)

HSP 1 Score: 90.5 bits (223), Expect = 5.850e-20
Identity = 41/50 (82.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 GPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN 50
            GPRRKKAAYAGGLVLEPK GLYD+ +LLLDFNSLYPS+I+EYN+CFTT++
Sbjct:  889 GPRRKKAAYAGGLVLEPKAGLYDKLVLLLDFNSLYPSIIREYNICFTTVD 938          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig97617.17747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J6SJT1_PEROL8.250e-2282.00DNA-directed DNA polymerase alpha catalytic subuni... [more]
A0A0L0DRB9_THETB3.540e-2187.76DNA polymerase n=1 Tax=Thecamonas trahens ATCC 500... [more]
A0A8J8T8Z7_HALGN3.140e-2084.00DNA polymerase n=1 Tax=Halteria grandinella TaxID=... [more]
A0A8J6CAH7_DIALT4.280e-2085.42DNA polymerase n=2 Tax=Diacronema lutheri TaxID=20... [more]
D7FI10_ECTSI4.280e-20100.00DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
UPI0006266BE44.280e-2087.50DNA polymerase alpha catalytic subunit n=1 Tax=Oru... [more]
A0A7J6PM48_PEROL5.850e-2082.00DNA polymerase n=1 Tax=Perkinsus olseni TaxID=3259... [more]
A0A7J6MSZ3_PEROL5.850e-2082.00DNA polymerase n=2 Tax=Perkinsus olseni TaxID=3259... [more]
A0A7J6LTY8_PERCH5.850e-2082.00DNA polymerase n=1 Tax=Perkinsus chesapeaki TaxID=... [more]
A0A7J6QV35_PEROL5.850e-2082.00DNA-directed DNA polymerase n=2 Tax=Perkinsus olse... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023211DNA polymerase, palm domain superfamilyGENE3D3.90.1600.10coord: 2..50
e-value: 1.9E-20
score: 75.2
IPR006134DNA-directed DNA polymerase, family B, multifunctional domainPFAMPF00136DNA_pol_Bcoord: 5..49
e-value: 3.6E-22
score: 78.7
NoneNo IPR availablePANTHERPTHR45861FAMILY NOT NAMEDcoord: 3..49
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 4..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig97617contigS-dermatodea_contig97617:278..427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig97617.17747.1mRNA_S-dermatodea_contig97617.17747.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig97617 278..427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig97617.17747.1 ID=prot_S-dermatodea_contig97617.17747.1|Name=mRNA_S-dermatodea_contig97617.17747.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=50bp
GPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSLIQEYNLCFTTMN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023211DNA_pol_palm_dom_sf
IPR006134DNA-dir_DNA_pol_B_multi_dom