prot_S-dermatodea_contig9707.17708.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9707.17708.1
Unique Nameprot_S-dermatodea_contig9707.17708.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length188
Homology
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BLAST of mRNA_S-dermatodea_contig9707.17708.1 vs. uniprot
Match: A0A6H5KU31_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU31_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 5.160e-71
Identity = 116/167 (69.46%), Postives = 144/167 (86.23%), Query Frame = 0 
Query:    1 MEERSSKRVVHFMGRSEREGVLLPEGSCTQDGRGPGVTVELPKTASHREILETLCNRLEMVENPLLLRVSAMNVSGKPQSFPIRVHLSDLDLPQHGLHKVLEIGAGAHHRHTLIFEMAPFPVDELTHSVTLVEAFSTDAVLKRHCLAKMEEHPVMILARKRTRARRE 167
            +E+RS++RVVHFMGR+ER+GVLLPEGS T+DGR PGV+VELP+TASHREILETL  RLE+V++PLLLR+SAM   GKPQSFP RVH+SDLDLPQ  LHK+L++  GAHH HT++FE+ PFP+++LT + TLVEA+S+DAVLK HCLA+MEE P M LAR+R  AR E
Sbjct: 1268 LEQRSAQRVVHFMGRTERDGVLLPEGSMTEDGRMPGVSVELPRTASHREILETLSRRLELVDDPLLLRISAMTTGGKPQSFPTRVHMSDLDLPQFALHKILDVNQGAHHHHTILFELLPFPMNQLTAATTLVEAYSSDAVLKTHCLARMEEEPFMKLARRRKTARLE 1434
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BLAST of mRNA_S-dermatodea_contig9707.17708.1 vs. uniprot
Match: D8LL31_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL31_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 1.430e-64
Identity = 104/157 (66.24%), Postives = 133/157 (84.71%), Query Frame = 0 
Query:    1 MEERSSKRVVHFMGRSEREGVLLPEGSCTQDGRGPGVTVELPKTASHREILETLCNRLEMVENPLLLRVSAMNVSGKPQSFPIRVHLSDLDLPQHGLHKVLEIGAGAHHRHTLIFEMAPFPVDELTHSVTLVEAFSTDAVLKRHCLAKMEEHPVMIL 157
            +E+RS++RVVHFMGR++R+GVLLPEGS TQDGR PGV+VELP+TASHREILETL  RLE+V++PLLLR+SAM   GKPQSFP RVH+SDLDLPQ  LHK+L++  GAHH HT++FE+ PFP+++LT + TLVEA+S+DAVLK HCL     H  +++
Sbjct: 1249 LEQRSAQRVVHFMGRTDRDGVLLPEGSMTQDGRMPGVSVELPRTASHREILETLSRRLELVDDPLLLRISAMTTGGKPQSFPTRVHMSDLDLPQFALHKILDVNQGAHHHHTILFELLPFPMNQLTAATTLVEAYSSDAVLKTHCLYAARLHGNLVI 1405
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9707.17708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU31_9PHAE5.160e-7169.46USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LL31_ECTSI1.430e-6466.24USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9707contigS-dermatodea_contig9707:1499..7875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9707.17708.1mRNA_S-dermatodea_contig9707.17708.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9707 1499..7894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9707.17708.1 ID=prot_S-dermatodea_contig9707.17708.1|Name=mRNA_S-dermatodea_contig9707.17708.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=188bp
MEERSSKRVVHFMGRSEREGVLLPEGSCTQDGRGPGVTVELPKTASHREI
LETLCNRLEMVENPLLLRVSAMNVSGKPQSFPIRVHLSDLDLPQHGLHKV
LEIGAGAHHRHTLIFEMAPFPVDELTHSVTLVEAFSTDAVLKRHCLAKME
EHPVMILARKRTRARREAAERDAAAVAVAGAVEGAGNG
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