prot_S-dermatodea_contig9705.17707.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9705.17707.1
Unique Nameprot_S-dermatodea_contig9705.17707.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length71
Homology
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: D7FWE2_ECTSI (WD40 repeat protein flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE2_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.660e-35
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0
Query:    8 SNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            SNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDE+GLIIVWMLHKGLWFEEMINNR+KSAVRDMK
Sbjct:   77 SNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMK 140          
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: A0A7S2BR82_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BR82_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.170e-33
Identity = 54/64 (84.38%), Postives = 57/64 (89.06%), Query Frame = 0
Query:    8 SNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            SNLSMNQTL+GH G VVCVTWNA Y KLTT DE GLIIVWMLHKG+WFEEMINNRNKS V+DMK
Sbjct:   57 SNLSMNQTLDGHHGKVVCVTWNALYRKLTTSDESGLIIVWMLHKGMWFEEMINNRNKSVVKDMK 120          
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: A0A7S3Y5Z0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5Z0_HETAK)

HSP 1 Score: 120 bits (302), Expect = 2.360e-33
Identity = 55/67 (82.09%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    5 GGGSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            G  SNLSMNQTLEGH GSV CVTWNA Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS V DMK
Sbjct:    2 GPSSNLSMNQTLEGHNGSVCCVTWNANYRKLTTSDQNGLIIVWMLHKGMWFEEMINNRNKSVVNDMK 68          
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: A0A2J7ZHB6_9CHLO (WD repeat domain-containing protein (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZHB6_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 3.330e-31
Identity = 52/68 (76.47%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    4 GGGGSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            G  G NLS+NQTLEGH G+VVCV WN  + KLTT DE GLIIVWMLHKG+WFEEMINNRNKS V+DMK
Sbjct:   58 GAAGGNLSLNQTLEGHNGAVVCVCWNNAFQKLTTSDEFGLIIVWMLHKGMWFEEMINNRNKSVVKDMK 125          
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: A0A7S0AX46_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AX46_9DINO)

HSP 1 Score: 115 bits (287), Expect = 9.520e-31
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    4 GGGGSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            GG   NLSMNQTLEGH+G+++ +TWNA + KLTT D+ GLIIVWMLH+G+WFEEMINNRN+S VRDMK
Sbjct:   60 GGAQGNLSMNQTLEGHQGNIMVITWNANFRKLTTSDQNGLIIVWMLHRGIWFEEMINNRNRSVVRDMK 127          
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: A0A7S0WI31_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI31_9CHLO)

HSP 1 Score: 115 bits (287), Expect = 1.090e-30
Identity = 54/71 (76.06%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    1 APTGGGGSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            A  G   SNLSMNQTLEGH GSV+ V WN  Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS VRDMK
Sbjct:   54 AKGGPAASNLSMNQTLEGHNGSVMVVNWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSVVRDMK 124          
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: F0XVP7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVP7_AURAN)

HSP 1 Score: 122 bits (305), Expect = 1.200e-30
Identity = 57/71 (80.28%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    1 APTGGGGSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            AP G   SNLSMNQTLEGH GSV+CVTWNA Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS VR MK
Sbjct:   76 APGGSVPSNLSMNQTLEGHHGSVMCVTWNANYRKLTTSDQNGLIIVWMLHKGVWFEEMINNRNKSVVRAMK 146          
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: A0A835YIA3_9STRA (WD40 repeat protein flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA3_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.640e-30
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0
Query:    7 GSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            GS+LSMNQTLEGH GSV+CVTWN+ YSKLTT DE GLIIVWMLHKG+W+EEMINNR KS VRDMK
Sbjct:   56 GSDLSMNQTLEGHNGSVMCVTWNSNYSKLTTSDENGLIIVWMLHKGMWYEEMINNRGKSVVRDMK 120          
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: A0A7S0HEY4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HEY4_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 1.900e-30
Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0
Query:    8 SNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            SNLSMNQTLEGH GSV+CV WN  Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS VR MK
Sbjct:   70 SNLSMNQTLEGHNGSVMCVCWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSTVRGMK 133          
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Match: A0A7S2I0P8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2I0P8_9DINO)

HSP 1 Score: 113 bits (282), Expect = 2.100e-30
Identity = 48/67 (71.64%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    5 GGGSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLHKGLWFEEMINNRNKSAVRDMK 71
            G   NLSMNQTLEGH+G+++ +TWNA + KLTT D+ GLIIVWMLH+G+WFEEMINNRN+S VRDMK
Sbjct:    7 GAQGNLSMNQTLEGHQGNIMVITWNANFRKLTTSDQNGLIIVWMLHRGIWFEEMINNRNRSVVRDMK 73          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9705.17707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWE2_ECTSI1.660e-3596.88WD40 repeat protein flagellar associated protein n... [more]
A0A7S2BR82_9STRA2.170e-3384.38Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3Y5Z0_HETAK2.360e-3382.09Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2J7ZHB6_9CHLO3.330e-3176.47WD repeat domain-containing protein (Fragment) n=1... [more]
A0A7S0AX46_9DINO9.520e-3172.06Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A7S0WI31_9CHLO1.090e-3076.06Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
F0XVP7_AURAN1.200e-3080.28Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835YIA3_9STRA1.640e-3083.08WD40 repeat protein flagellar associated protein n... [more]
A0A7S0HEY4_9EUKA1.900e-3081.25Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S2I0P8_9DINO2.100e-3071.64Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..71
e-value: 5.3E-8
score: 34.0
IPR017233WD repeat protein 35PANTHERPTHR16517:SF1WD REPEAT-CONTAINING PROTEIN 35coord: 18..71
NoneNo IPR availablePANTHERPTHR16517TUBBY-RELATEDcoord: 18..71
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 16..47
score: 8.971
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 11..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9705contigS-dermatodea_contig9705:6798..7593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9705.17707.1mRNA_S-dermatodea_contig9705.17707.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9705 6798..7593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9705.17707.1 ID=prot_S-dermatodea_contig9705.17707.1|Name=mRNA_S-dermatodea_contig9705.17707.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=71bp
APTGGGGSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDERGLIIVWMLH
KGLWFEEMINNRNKSAVRDMK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017233WDR35
IPR001680WD40_repeat
IPR036322WD40_repeat_dom_sf