prot_S-dermatodea_contig97018.17702.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig97018.17702.1
Unique Nameprot_S-dermatodea_contig97018.17702.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length85
Homology
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: A0A6H5KQK5_9PHAE (PSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQK5_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 9.150e-30
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0
Query:   15 LLLQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLKKVR 76
            + L+SYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADS KK +
Sbjct:  254 VFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSQKKAK 315          
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: A0A7S2AZW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZW4_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 8.970e-25
Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 0
Query:   17 LQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLKKVR 76
            L+SYRN+VPVPRHWC KRKYLQGKRG++KTPFELPEFIA TGI+KIR AI E +   K +
Sbjct:   17 LKSYRNSVPVPRHWCHKRKYLQGKRGLDKTPFELPEFIAQTGIEKIRTAIIEQEEQMKAK 76          
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: W1PIM2_AMBTC (DUF382 domain-containing protein (Fragment) n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PIM2_AMBTC)

HSP 1 Score: 98.6 bits (244), Expect = 1.450e-23
Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 0
Query:   15 LLLQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLKKVR 76
            + L+SYRNTVPVPRHWCQKRK+LQGKRGIEK PF+LP+FIA TGI+KIR A  E +  KK++
Sbjct:  128 VFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLK 189          
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: A0A833QN24_9POAL (Proline-rich spliceosome-associated family protein isoform 2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QN24_9POAL)

HSP 1 Score: 98.2 bits (243), Expect = 4.490e-23
Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 0
Query:   17 LQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLKKVR 76
            L+SYRNTVPVPRHWCQKRK+LQGKRGIEK PF+LP+FIA TGI+KIR A  E +  KK++
Sbjct:  135 LKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLK 194          
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: A0A836CFT2_9STRA (Proline-rich spliceosome-associated family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT2_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.290e-23
Identity = 45/57 (78.95%), Postives = 50/57 (87.72%), Query Frame = 0
Query:   17 LQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLK 73
            L+SYRNTVPVPRHWC KRKYLQGKRGIEK PFELPEFIAMTGI K+R  ++EAD  +
Sbjct:  182 LKSYRNTVPVPRHWCHKRKYLQGKRGIEKKPFELPEFIAMTGISKLRDNVDEADGKR 238          
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: L8H7N6_ACACA (PSP, prolinerich, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H7N6_ACACA)

HSP 1 Score: 100 bits (250), Expect = 5.450e-23
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0
Query:   17 LQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLKKVR 76
            L+SYRN+VPVPRHWCQKRKYLQGKRGI K PFELPEFIA TGI +IR A++E D  KK++
Sbjct:  198 LKSYRNSVPVPRHWCQKRKYLQGKRGIAKPPFELPEFIAATGISRIRQALQEEDDKKKLK 257          
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: A0A803LLD4_CHEQI (PSP domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LLD4_CHEQI)

HSP 1 Score: 100 bits (248), Expect = 5.620e-23
Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 0
Query:   15 LLLQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLKKVR 76
            + L+SYRNTVPVPRHWCQKRKYLQGKRGIEK PF+LP+FIA TGI+KIR A  E +  KK++
Sbjct:  133 VFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLK 194          
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: A0A166IT43_DAUCS (PSP domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166IT43_DAUCS)

HSP 1 Score: 100 bits (249), Expect = 7.340e-23
Identity = 45/62 (72.58%), Postives = 54/62 (87.10%), Query Frame = 0
Query:   15 LLLQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLKKVR 76
            + L+SYRNTVPVPRHWCQKRK+LQGKRGIEKTPF+LP+FIA TGI+KIR A  E +  KK++
Sbjct:  186 VFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKTPFQLPDFIAATGIEKIRQAYIEKEDNKKLK 247          
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: A0A803LPT9_CHEQI (PSP domain-containing protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LPT9_CHEQI)

HSP 1 Score: 100 bits (248), Expect = 9.550e-23
Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 0
Query:   15 LLLQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLKKVR 76
            + L+SYRNTVPVPRHWCQKRKYLQGKRGIEK PF+LP+FIA TGI+KIR A  E +  KK++
Sbjct:  204 VFLKSYRNTVPVPRHWCQKRKYLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLK 265          
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Match: A0A2P2L7W2_RHIMU (Pliceosome associated family protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2L7W2_RHIMU)

HSP 1 Score: 98.6 bits (244), Expect = 9.580e-23
Identity = 44/62 (70.97%), Postives = 53/62 (85.48%), Query Frame = 0
Query:   15 LLLQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFELPEFIAMTGIDKIRAAIEEADSLKKVR 76
            + L+SYRNTVPVPRHWCQKRK+LQGKRGIEK PF+LP+FIA TGI+KIR A  E +  KK++
Sbjct:  200 VFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLK 261          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig97018.17702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQK5_9PHAE9.150e-3090.32PSP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2AZW4_9STRA8.970e-2573.33Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
W1PIM2_AMBTC1.450e-2370.97DUF382 domain-containing protein (Fragment) n=1 Ta... [more]
A0A833QN24_9POAL4.490e-2373.33Proline-rich spliceosome-associated family protein... [more]
A0A836CFT2_9STRA5.290e-2378.95Proline-rich spliceosome-associated family protein... [more]
L8H7N6_ACACA5.450e-2375.00PSP, prolinerich, putative n=1 Tax=Acanthamoeba ca... [more]
A0A803LLD4_CHEQI5.620e-2372.58PSP domain-containing protein n=1 Tax=Chenopodium ... [more]
A0A166IT43_DAUCS7.340e-2372.58PSP domain-containing protein n=2 Tax=Daucus carot... [more]
A0A803LPT9_CHEQI9.550e-2372.58PSP domain-containing protein n=3 Tax=Chenopodium ... [more]
A0A2P2L7W2_RHIMU9.580e-2370.97Pliceosome associated family protein n=1 Tax=Rhizo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007180Domain of unknown function DUF382PFAMPF04037DUF382coord: 11..77
e-value: 1.6E-22
score: 80.0
NoneNo IPR availablePANTHERPTHR12785:SF6SPLICING FACTOR 3B SUBUNIT 2coord: 16..76
NoneNo IPR availablePANTHERPTHR12785splicing factor 3Bcoord: 16..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig97018contigS-dermatodea_contig97018:110..364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig97018.17702.1mRNA_S-dermatodea_contig97018.17702.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig97018 110..364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig97018.17702.1 ID=prot_S-dermatodea_contig97018.17702.1|Name=mRNA_S-dermatodea_contig97018.17702.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=85bp
MSTPPPRPPAPPAPLLLQSYRNTVPVPRHWCQKRKYLQGKRGIEKTPFEL
PEFIAMTGIDKIRAAIEEADSLKKVRDSYPTHNC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007180DUF382