prot_S-dermatodea_contig9625.17641.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9625.17641.1
Unique Nameprot_S-dermatodea_contig9625.17641.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length39
Homology
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: A0A7S2C9X7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9X7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.510e-16
Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    1 VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMKPE 39
            VCIGGGAGFIGSHLAK++ SEGWYVIC DWK+NEFM+P+
Sbjct:   22 VCIGGGAGFIGSHLAKRMMSEGWYVICVDWKDNEFMQPD 60          
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: A0A7S3L783_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L783_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.840e-15
Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMKPE 39
            VC+GGGAGFIGSH+AK+LK  G+YVIC DWKENEFMKP+
Sbjct:   17 VCVGGGAGFIGSHIAKRLKENGYYVICVDWKENEFMKPD 55          
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: A0A7S2CJC0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJC0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 4.400e-15
Identity = 31/38 (81.58%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    1 VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMKP 38
            VCIGGGAGFIGSHLAK++ +EGW+VICADWK+NEFM P
Sbjct:   34 VCIGGGAGFIGSHLAKRMMAEGWHVICADWKDNEFMAP 71          
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: A0A812WUJ0_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WUJ0_SYMMI)

HSP 1 Score: 72.4 bits (176), Expect = 5.260e-15
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    1 VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMKP 38
            VC+GGGAGFIGSH+AK+LK  G YV+CADWK+NEFM+P
Sbjct:   25 VCVGGGAGFIGSHIAKRLKEAGCYVVCADWKDNEFMEP 62          
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: D8LR35_ECTSI (Nad-dependent epimerase/dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR35_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 5.640e-15
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    1 VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMKP 38
            V IGGGAGFIGSHLAK+LK EGWYV+CADWK NEFM+P
Sbjct:   38 VFIGGGAGFIGSHLAKRLKGEGWYVVCADWKANEFMEP 75          
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: A0A1E7FKD6_9STRA (Putative bifunctional dTDP-glucose 4,6-dehydratase/UDP-glucuronate decarboxylase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKD6_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.870e-14
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMK 37
            VC+GGGAGFIGSH+AK+LK  GWYVIC DWK NEFMK
Sbjct:   18 VCVGGGAGFIGSHIAKRLKEAGWYVICVDWKTNEFMK 54          
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: K0TK28_THAOC (Epimerase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TK28_THAOC)

HSP 1 Score: 68.2 bits (165), Expect = 2.640e-14
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMKPE 39
            VC+GGGAGFIGSH+AK+LK  G+ V   DWKENEFMKPE
Sbjct:   17 VCVGGGAGFIGSHIAKRLKENGYRVTVVDWKENEFMKPE 55          
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: A0A6U1M3G1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M3G1_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.490e-13
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMKPE 39
            VC+GGG GFIGSHLA +L+ EG++VICADWKENEFMK E
Sbjct:   20 VCVGGGGGFIGSHLAIRLRKEGYHVICADWKENEFMKEE 58          
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: A0A7R9WN58_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WN58_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.490e-13
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    2 CIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMKPE 39
            C+GGGAGFIGSH+AK+LK  GWYVI  DWK+NEFMK E
Sbjct:   19 CVGGGAGFIGSHIAKRLKESGWYVIVVDWKKNEFMKEE 56          
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Match: A0A836CBP2_9STRA (Nad-dependent epimerase/dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.530e-13
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFM 36
            VCI GGAGFIGSHL K+LKSEGWYV+ ADWK NEFM
Sbjct:   33 VCIAGGAGFIGSHLGKRLKSEGWYVVAADWKTNEFM 68          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9625.17641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2C9X7_9STRA4.510e-1682.05Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3L783_9STRA2.840e-1579.49Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2CJC0_9STRA4.400e-1581.58Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812WUJ0_SYMMI5.260e-1576.32Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
D8LR35_ECTSI5.640e-1584.21Nad-dependent epimerase/dehydratase n=1 Tax=Ectoca... [more]
A0A1E7FKD6_9STRA1.870e-1481.08Putative bifunctional dTDP-glucose 4,6-dehydratase... [more]
K0TK28_THAOC2.640e-1474.36Epimerase domain-containing protein (Fragment) n=1... [more]
A0A6U1M3G1_9STRA2.490e-1376.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9WN58_9STRA2.490e-1376.32Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A836CBP2_9STRA2.530e-1383.33Nad-dependent epimerase/dehydratase n=1 Tax=Tribon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 3..37
e-value: 9.9E-10
score: 40.1
NoneNo IPR availablePANTHERPTHR43574:SF13GDP-MANNOSE 3,5-EPIMERASEcoord: 1..38
NoneNo IPR availablePANTHERPTHR43574FAMILY NOT NAMEDcoord: 1..38
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 1..33
e-value: 4.1E-6
score: 26.4
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9625contigS-dermatodea_contig9625:1861..1977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9625.17641.1mRNA_S-dermatodea_contig9625.17641.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9625 1861..1977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9625.17641.1 ID=prot_S-dermatodea_contig9625.17641.1|Name=mRNA_S-dermatodea_contig9625.17641.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=39bp
VCIGGGAGFIGSHLAKKLKSEGWYVICADWKENEFMKPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR036291NAD(P)-bd_dom_sf