prot_S-dermatodea_contig9605.17625.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9605.17625.1
Unique Nameprot_S-dermatodea_contig9605.17625.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length97
Homology
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BLAST of mRNA_S-dermatodea_contig9605.17625.1 vs. uniprot
Match: D7FIX0_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX0_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 4.230e-24
Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 0 
Query:   13 QVVNGATAQAMMNRAAALVKWEGIMSQSTRKKAYERVAPGKGRRSHITLKGWFGHGSTEVFCSEEGARAVEPEQSSSTKAIDPHA 97
            ++  GATAQA M+RAAALVKWEGIMS  TR+    +VAPGKG+ S +T+ GW G G+TE+FC++EGA AVEPEQS+  + +D HA
Sbjct:  968 EMEKGATAQATMDRAAALVKWEGIMSDKTRR----QVAPGKGKSSEVTITGWSGGGATEIFCTDEGATAVEPEQSTIGRRVDTHA 1048
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9605.17625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIX0_ECTSI4.230e-2460.00Ankyrin Repeat Transient Receptor Potential Channe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9605contigS-dermatodea_contig9605:5696..7502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9605.17625.1mRNA_S-dermatodea_contig9605.17625.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9605 5694..7502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9605.17625.1 ID=prot_S-dermatodea_contig9605.17625.1|Name=mRNA_S-dermatodea_contig9605.17625.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=97bp
SVLRVVFCFAPWQVVNGATAQAMMNRAAALVKWEGIMSQSTRKKAYERVA
PGKGRRSHITLKGWFGHGSTEVFCSEEGARAVEPEQSSSTKAIDPHA
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