prot_S-dermatodea_contig9605.17624.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9605.17624.1
Unique Nameprot_S-dermatodea_contig9605.17624.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length61
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig9605.17624.1 vs. uniprot
Match: D7FIX0_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX0_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 2.790e-15
Identity = 37/57 (64.91%), Postives = 48/57 (84.21%), Query Frame = 0 
Query:    4 VTADDLKAWRERAGEVQEQAKSRQGVVRAQAIIRGYLSRSKSGARFLPDNKDTDDDG 60
            VT ++++ WR +A EVQEQAKSR+GV RAQA+IRGYLSR+K   RFLPDN++T D+G
Sbjct: 1149 VTPEEVEEWRRKALEVQEQAKSRRGVTRAQALIRGYLSRAKLAPRFLPDNQETSDEG 1205
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9605.17624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIX0_ECTSI2.790e-1564.91Ankyrin Repeat Transient Receptor Potential Channe... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 25..54
score: 7.437

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9605contigS-dermatodea_contig9605:3558..4860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9605.17624.1mRNA_S-dermatodea_contig9605.17624.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9605 3499..4901 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9605.17624.1 ID=prot_S-dermatodea_contig9605.17624.1|Name=mRNA_S-dermatodea_contig9605.17624.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=61bp
MGSVTADDLKAWRERAGEVQEQAKSRQGVVRAQAIIRGYLSRSKSGARFL
PDNKDTDDDG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS