prot_S-dermatodea_contig9571.17593.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9571.17593.1
Unique Nameprot_S-dermatodea_contig9571.17593.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length46
Homology
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BLAST of mRNA_S-dermatodea_contig9571.17593.1 vs. uniprot
Match: D8LCC3_ECTSI (RHD3c, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC3_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.900e-13
Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:    1 RCHFHEQFEEAFSCVLGGAPDFDNSSRKIAKSARANFLDATK 42
            R HFHEQFEE FSCVLGGA DFD SSR+++K+ R NFL+ATK
Sbjct:  434 RGHFHEQFEEVFSCVLGGAADFDQSSRRMSKTIRQNFLEATK 475
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BLAST of mRNA_S-dermatodea_contig9571.17593.1 vs. uniprot
Match: A0A6H5KVA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVA5_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 3.960e-13
Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:    1 RCHFHEQFEEAFSCVLGGAPDFDNSSRKIAKSARANFLDATK 42
            R HFHEQFEE FSCVLGGA DFD SSR+++K+ R NFL+ATK
Sbjct:  485 RGHFHEQFEEMFSCVLGGAADFDQSSRRMSKTIRQNFLEATK 526
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9571.17593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCC3_ECTSI2.900e-1373.81RHD3c, RHD3/Sey1 family GTPase involved in the ER-... [more]
A0A6H5KVA5_9PHAE3.960e-1373.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9571contigS-dermatodea_contig9571:401..538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9571.17593.1mRNA_S-dermatodea_contig9571.17593.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9571 401..538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9571.17593.1 ID=prot_S-dermatodea_contig9571.17593.1|Name=mRNA_S-dermatodea_contig9571.17593.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=46bp
RCHFHEQFEEAFSCVLGGAPDFDNSSRKIAKSARANFLDATKASW*
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