prot_S-dermatodea_contig95441.17566.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig95441.17566.1
Unique Nameprot_S-dermatodea_contig95441.17566.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length73
Homology
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BLAST of mRNA_S-dermatodea_contig95441.17566.1 vs. uniprot
Match: D8LKQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ1_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 4.290e-12
Identity = 46/96 (47.92%), Postives = 50/96 (52.08%), Query Frame = 0 
Query:    1 RFVHVVARVQNTTGPDWFSLKVDPGIGTACPPPT--PPPPYGSRGVAGVGGGHVA-----------------------AETVVEFVRSQADGSFAL 71
            RFVHVVARVQNTTGPD FSL+VDPGIGTA  P     P P  + G  G   G                           + VVE+VRSQ DGSFAL
Sbjct:  384 RFVHVVARVQNTTGPDCFSLRVDPGIGTASAPAPYLRPRPAAASGSGGFAPGFTPWDGXXXXXXXXXXXXXXXXXXXXHQEVVEYVRSQIDGSFAL 479
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig95441.17566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKQ1_ECTSI4.290e-1247.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig95441contigS-dermatodea_contig95441:200..418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig95441.17566.1mRNA_S-dermatodea_contig95441.17566.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig95441 200..418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig95441.17566.1 ID=prot_S-dermatodea_contig95441.17566.1|Name=mRNA_S-dermatodea_contig95441.17566.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=73bp
RFVHVVARVQNTTGPDWFSLKVDPGIGTACPPPTPPPPYGSRGVAGVGGG
HVAAETVVEFVRSQADGSFALC*
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