prot_S-dermatodea_contig9508.17538.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9508.17538.1
Unique Nameprot_S-dermatodea_contig9508.17538.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length122
Homology
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 3.490e-62
Identity = 100/114 (87.72%), Postives = 108/114 (94.74%), Query Frame = 0
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLSPDGPSFEA 114
            +P DAKH+ASEMLG KLITKQTGE+GLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELI+KEEV++  GLTDAQA KIA+HLKLS DGPS+EA
Sbjct:  121 KPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEA 234          
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A835YQF4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.680e-42
Identity = 74/112 (66.07%), Postives = 92/112 (82.14%), Query Frame = 0
Query:    2 PEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLSPDGPSFE 113
            P +A+ +A +MLG+KLITKQTG  GLPC KVLLMER+YMRREMYLSIMMDR  +GPV+VAC  GGTSIEDLAE +PEL++K  V++  GLT+ QA KIAKHL+L P  P+++
Sbjct:  116 PAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYD 227          
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK)

HSP 1 Score: 136 bits (342), Expect = 4.850e-36
Identity = 69/118 (58.47%), Postives = 91/118 (77.12%), Query Frame = 0
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLSPDGPSF-EAVSL 117
            RP  AK +A +MLG+ L+TKQT  EG+ C KV LMER+YMRREMYLS+M+DRG+QGP++VA P GGTSIED+AE  PELI  + +++  GLTDAQASK+A +L +    PS  +A++L
Sbjct:   65 RPGQAKDYAEKMLGNYLVTKQTTAEGVLCSKVFLMERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIAL 182          
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: H3GTW5_PHYRM (ATP-grasp domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTW5_PHYRM)

HSP 1 Score: 134 bits (336), Expect = 6.090e-36
Identity = 66/103 (64.08%), Postives = 81/103 (78.64%), Query Frame = 0
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHL 103
            RPE A+ FA +MLG  L+TKQTGE+G+   KV LMER++MRREMY SI+MDR SQGPV+VA P GGTSIED+AE+ PELI KE V++  G TD Q S++AK L
Sbjct:  100 RPEQAEDFAKKMLGETLVTKQTGEKGIEVAKVFLMERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKESVDISTGPTDEQVSRLAKAL 202          
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A067CEF9_SAPPC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC)

HSP 1 Score: 133 bits (335), Expect = 8.600e-35
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 0
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLS 106
            +PEDAK+FA +MLG  L+TKQTGE+G+   KV LMER+YMRREMY SI+MDR S GPV+VA P GGTSIED+A + PELI KE VN+  G T  Q +++A ++ LS
Sbjct:   99 KPEDAKNFAEKMLGETLVTKQTGEKGIEVAKVFLMERVYMRREMYFSILMDRASNGPVLVASPAGGTSIEDVAHATPELIFKEAVNITTGPTSEQLNRLAANMGLS 204          
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A5D6YJ52_9STRA (Succinate-CoA ligase subunit beta (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YJ52_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.460e-34
Identity = 66/116 (56.90%), Postives = 86/116 (74.14%), Query Frame = 0
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLSPDG-PSFEAV 115
            RPE A+  A +MLG  L+TKQTG +G+   KV L+ER+YMRREMY SI+MDR SQGPVIVA P GGTSIED+A + PELI KE V++  G+TDAQ +++A++L +     P  EA+
Sbjct:   61 RPEQARQIAEKMLGQTLVTKQTGAKGIEVAKVFLVERVYMRREMYFSILMDRASQGPVIVASPAGGTSIEDVAAATPELIFKENVDIMTGVTDAQVARLARNLGVDDASVPQLEAM 176          
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A2D4BIQ5_PYTIN (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4BIQ5_PYTIN)

HSP 1 Score: 132 bits (331), Expect = 3.520e-34
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    2 PEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHL 103
            PE A+  A +MLG  L+TKQTGE+G+   KV L+ER+YMRREMY SI+MDR SQGPVIVA P GGTSIED+AE+ PELI KE+V++  G TDAQ + +AK L
Sbjct:  105 PEQAREIAKKMLGQTLVTKQTGEKGIEVAKVFLVERVYMRREMYFSILMDRASQGPVIVASPAGGTSIEDVAEATPELIFKEKVDITTGPTDAQVTHLAKSL 206          
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A0W8DSX0_PHYNI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DSX0_PHYNI)

HSP 1 Score: 129 bits (325), Expect = 1.460e-33
Identity = 63/103 (61.17%), Postives = 80/103 (77.67%), Query Frame = 0
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHL 103
            +PE A+ FA +MLG  L+TKQTG +G+   KV LMER++MRREMY SI+MDR SQGPV+VA P GGTSIED+AE+ PELI KE V++  G TD Q +++AK L
Sbjct:   67 KPEQAEEFAKKMLGETLVTKQTGAKGIEVAKVFLMERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKESVDISTGPTDEQVARLAKAL 169          
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: M4B607_HYAAE (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4B607_HYAAE)

HSP 1 Score: 129 bits (325), Expect = 2.500e-33
Identity = 63/103 (61.17%), Postives = 80/103 (77.67%), Query Frame = 0
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHL 103
            +PE A+  A +MLG  L+TKQTGE+G+   KV LMER++MRREMY SI+MDR +QGPV+VA P GGTSIED+AE+ PELI KE +++  G TDAQ S +AK L
Sbjct:  103 KPEQAEDLAKKMLGETLVTKQTGEKGIQVAKVFLMERVWMRREMYFSILMDRAAQGPVMVASPAGGTSIEDVAEATPELIFKENIDISTGPTDAQVSHLAKAL 205          
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A485KYE4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 6.510e-33
Identity = 62/105 (59.05%), Postives = 80/105 (76.19%), Query Frame = 0
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKL 105
            + EDAK FA +M+G  L+TKQTGE+G+   KV LMER+YMRREMY SI+MDR SQGPV+VA P GGTSIED+A + PELI KE +++  G TD Q  ++A ++ L
Sbjct:   98 KAEDAKTFAQKMIGETLVTKQTGEKGIEVAKVFLMERVYMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAHATPELIFKENIDIMTGPTDEQLKRLASNMGL 202          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0B9_ECTSI3.490e-6287.72Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A835YQF4_9STRA5.680e-4266.07Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3XRL5_HETAK4.850e-3658.47Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
H3GTW5_PHYRM6.090e-3664.08ATP-grasp domain-containing protein n=1 Tax=Phytop... [more]
A0A067CEF9_SAPPC8.600e-3561.32Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A5D6YJ52_9STRA3.460e-3456.90Succinate-CoA ligase subunit beta (Fragment) n=1 T... [more]
A0A2D4BIQ5_PYTIN3.520e-3463.73Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A0W8DSX0_PHYNI1.460e-3361.17Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
M4B607_HYAAE2.500e-3361.17Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A485KYE4_9STRA6.510e-3359.05Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.470.20coord: 24..120
e-value: 3.1E-23
score: 84.1
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 2..107
IPR013650ATP-grasp fold, succinyl-CoA synthetase-typePFAMPF08442ATP-grasp_2coord: 2..108
e-value: 1.5E-33
score: 116.1
IPR005809Succinate--CoA synthetase, beta subunitPANTHERPTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINcoord: 2..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9508contigS-dermatodea_contig9508:135..7609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9508.17538.1mRNA_S-dermatodea_contig9508.17538.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9508 135..7609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9508.17538.1 ID=prot_S-dermatodea_contig9508.17538.1|Name=mRNA_S-dermatodea_contig9508.17538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=122bp
RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMM
DRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIA
KHLKLSPDGPSFEAVSLFVHQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013650ATP-grasp_succ-CoA_synth-type
IPR005809Succ_CoA_synthase_bsu