mRNA_S-dermatodea_contig9508.17538.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9508.17538.1
Unique NamemRNA_S-dermatodea_contig9508.17538.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 3.490e-62
Identity = 100/114 (87.72%), Postives = 108/114 (94.74%), Query Frame = 1 
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLSPDGPSFEA 342
            +P DAKH+ASEMLG KLITKQTGE+GLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELI+KEEV++  GLTDAQA KIA+HLKLS DGPS+EA
Sbjct:  121 KPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEA 234
[Close]
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A835YQF4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.680e-42
Identity = 74/112 (66.07%), Postives = 92/112 (82.14%), Query Frame = 1 
Query:    4 PEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLSPDGPSFE 339
            P +A+ +A +MLG+KLITKQTG  GLPC KVLLMER+YMRREMYLSIMMDR  +GPV+VAC  GGTSIEDLAE +PEL++K  V++  GLT+ QA KIAKHL+L P  P+++
Sbjct:  116 PAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYD 227
[Close]
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK)

HSP 1 Score: 136 bits (342), Expect = 4.850e-36
Identity = 69/118 (58.47%), Postives = 91/118 (77.12%), Query Frame = 1 
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLSPDGPSF-EAVSL 351
            RP  AK +A +MLG+ L+TKQT  EG+ C KV LMER+YMRREMYLS+M+DRG+QGP++VA P GGTSIED+AE  PELI  + +++  GLTDAQASK+A +L +    PS  +A++L
Sbjct:   65 RPGQAKDYAEKMLGNYLVTKQTTAEGVLCSKVFLMERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIAL 182
[Close]
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: H3GTW5_PHYRM (ATP-grasp domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTW5_PHYRM)

HSP 1 Score: 134 bits (336), Expect = 6.090e-36
Identity = 66/103 (64.08%), Postives = 81/103 (78.64%), Query Frame = 1 
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHL 309
            RPE A+ FA +MLG  L+TKQTGE+G+   KV LMER++MRREMY SI+MDR SQGPV+VA P GGTSIED+AE+ PELI KE V++  G TD Q S++AK L
Sbjct:  100 RPEQAEDFAKKMLGETLVTKQTGEKGIEVAKVFLMERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKESVDISTGPTDEQVSRLAKAL 202
[Close]
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A067CEF9_SAPPC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC)

HSP 1 Score: 133 bits (335), Expect = 8.600e-35
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 1 
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLS 318
            +PEDAK+FA +MLG  L+TKQTGE+G+   KV LMER+YMRREMY SI+MDR S GPV+VA P GGTSIED+A + PELI KE VN+  G T  Q +++A ++ LS
Sbjct:   99 KPEDAKNFAEKMLGETLVTKQTGEKGIEVAKVFLMERVYMRREMYFSILMDRASNGPVLVASPAGGTSIEDVAHATPELIFKEAVNITTGPTSEQLNRLAANMGLS 204
[Close]
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A5D6YJ52_9STRA (Succinate-CoA ligase subunit beta (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YJ52_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.460e-34
Identity = 66/116 (56.90%), Postives = 86/116 (74.14%), Query Frame = 1 
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKLSPDG-PSFEAV 345
            RPE A+  A +MLG  L+TKQTG +G+   KV L+ER+YMRREMY SI+MDR SQGPVIVA P GGTSIED+A + PELI KE V++  G+TDAQ +++A++L +     P  EA+
Sbjct:   61 RPEQARQIAEKMLGQTLVTKQTGAKGIEVAKVFLVERVYMRREMYFSILMDRASQGPVIVASPAGGTSIEDVAAATPELIFKENVDIMTGVTDAQVARLARNLGVDDASVPQLEAM 176
[Close]
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A2D4BIQ5_PYTIN (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4BIQ5_PYTIN)

HSP 1 Score: 132 bits (331), Expect = 3.520e-34
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 1 
Query:    4 PEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHL 309
            PE A+  A +MLG  L+TKQTGE+G+   KV L+ER+YMRREMY SI+MDR SQGPVIVA P GGTSIED+AE+ PELI KE+V++  G TDAQ + +AK L
Sbjct:  105 PEQAREIAKKMLGQTLVTKQTGEKGIEVAKVFLVERVYMRREMYFSILMDRASQGPVIVASPAGGTSIEDVAEATPELIFKEKVDITTGPTDAQVTHLAKSL 206
[Close]
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A0W8DSX0_PHYNI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DSX0_PHYNI)

HSP 1 Score: 129 bits (325), Expect = 1.460e-33
Identity = 63/103 (61.17%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHL 309
            +PE A+ FA +MLG  L+TKQTG +G+   KV LMER++MRREMY SI+MDR SQGPV+VA P GGTSIED+AE+ PELI KE V++  G TD Q +++AK L
Sbjct:   67 KPEQAEEFAKKMLGETLVTKQTGAKGIEVAKVFLMERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKESVDISTGPTDEQVARLAKAL 169
[Close]
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: M4B607_HYAAE (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4B607_HYAAE)

HSP 1 Score: 129 bits (325), Expect = 2.500e-33
Identity = 63/103 (61.17%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHL 309
            +PE A+  A +MLG  L+TKQTGE+G+   KV LMER++MRREMY SI+MDR +QGPV+VA P GGTSIED+AE+ PELI KE +++  G TDAQ S +AK L
Sbjct:  103 KPEQAEDLAKKMLGETLVTKQTGEKGIQVAKVFLMERVWMRREMYFSILMDRAAQGPVMVASPAGGTSIEDVAEATPELIFKENIDISTGPTDAQVSHLAKAL 205
[Close]
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Match: A0A485KYE4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 6.510e-33
Identity = 62/105 (59.05%), Postives = 80/105 (76.19%), Query Frame = 1 
Query:    1 RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIAKHLKL 315
            + EDAK FA +M+G  L+TKQTGE+G+   KV LMER+YMRREMY SI+MDR SQGPV+VA P GGTSIED+A + PELI KE +++  G TD Q  ++A ++ L
Sbjct:   98 KAEDAKTFAQKMIGETLVTKQTGEKGIEVAKVFLMERVYMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAHATPELIFKENIDIMTGPTDEQLKRLASNMGL 202
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9508.17538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0B9_ECTSI3.490e-6287.72Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A835YQF4_9STRA5.680e-4266.07Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3XRL5_HETAK4.850e-3658.47Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
H3GTW5_PHYRM6.090e-3664.08ATP-grasp domain-containing protein n=1 Tax=Phytop... [more]
A0A067CEF9_SAPPC8.600e-3561.32Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A5D6YJ52_9STRA3.460e-3456.90Succinate-CoA ligase subunit beta (Fragment) n=1 T... [more]
A0A2D4BIQ5_PYTIN3.520e-3463.73Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A0W8DSX0_PHYNI1.460e-3361.17Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
M4B607_HYAAE2.500e-3361.17Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A485KYE4_9STRA6.510e-3359.05Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9508contigS-dermatodea_contig9508:135..7609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score205.3
Seed ortholog evalue1.6e-50
Seed eggNOG ortholog2880.D7G0B9
KEGG rclassRC00004,RC00014
KEGG koko:K01900
KEGG ReactionR00432,R00727
KEGG Pathwayko00020,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011
EggNOG free text desc.succinate-CoA ligase (ADP-forming) activity
EggNOG OGsCOG0045@1,KOG2799@2759
EC6.2.1.4,6.2.1.5
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSuccinate:CoA ligase (ADP-forming)
Ec32 orthologEc-02_001020.1
Exons4
Model size366
Cds size366
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9508.17538.1prot_S-dermatodea_contig9508.17538.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9508 135..7609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925413.5238812-CDS-S-dermatodea_contig9508:134..2271622925413.5238812-CDS-S-dermatodea_contig9508:134..227Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9508 135..227 +
1694079917.0997922-CDS-S-dermatodea_contig9508:134..2271694079917.0997922-CDS-S-dermatodea_contig9508:134..227Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9508 135..227 +
1622925413.533922-CDS-S-dermatodea_contig9508:5304..53761622925413.533922-CDS-S-dermatodea_contig9508:5304..5376Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9508 5305..5376 +
1694079917.115065-CDS-S-dermatodea_contig9508:5304..53761694079917.115065-CDS-S-dermatodea_contig9508:5304..5376Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9508 5305..5376 +
1622925413.5431964-CDS-S-dermatodea_contig9508:6491..65721622925413.5431964-CDS-S-dermatodea_contig9508:6491..6572Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9508 6492..6572 +
1694079917.128268-CDS-S-dermatodea_contig9508:6491..65721694079917.128268-CDS-S-dermatodea_contig9508:6491..6572Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9508 6492..6572 +
1622925413.5528247-CDS-S-dermatodea_contig9508:7489..76091622925413.5528247-CDS-S-dermatodea_contig9508:7489..7609Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9508 7490..7609 +
1694079917.1418395-CDS-S-dermatodea_contig9508:7489..76091694079917.1418395-CDS-S-dermatodea_contig9508:7489..7609Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9508 7490..7609 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9508.17538.1

>prot_S-dermatodea_contig9508.17538.1 ID=prot_S-dermatodea_contig9508.17538.1|Name=mRNA_S-dermatodea_contig9508.17538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=122bp
RPEDAKHFASEMLGHKLITKQTGEEGLPCDKVLLMERMYMRREMYLSIMM
DRGSQGPVIVACPDGGTSIEDLAESNPELILKEEVNVEVGLTDAQASKIA
KHLKLSPDGPSFEAVSLFVHQ*
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mRNA from alignment at S-dermatodea_contig9508:135..7609+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9508.17538.1 ID=mRNA_S-dermatodea_contig9508.17538.1|Name=mRNA_S-dermatodea_contig9508.17538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7475bp|location=Sequence derived from alignment at S-dermatodea_contig9508:135..7609+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGGCCCGAGGACGCGAAGCACTTTGCGTCAGAGATGTTGGGTCACAAGCT
GATCACCAAGCAGACTGGGGAGGAGGGGCTGCCCTGCGATAAGGTGATGC
TACATGACGGGGGGGGGGAGAGAGGGGGGGTGGGCAGGGGTGGGGGCTTG
TGGCTGCTGCTGTCGTTGGGGCGCGGGAAATTTTCTGTTGTGTTATATTC
TAGCATGCTGTATATCTCGATAAATACCATACCAGTGTTGAAAGCAGTAA
GGGCATGTTTTGGTCGGAAGCTTTTGAAGGGTTGTCGGTTGTGCGTGTGT
TTTTTTTGCGTAGTTTGATAGTTTTTTGTTTTGTTTTCTGTTTTGTGTTT
GTTTGTGTGTTTGTGAGTGTGTGTGCGTGTATGTTTTTTTCCTTTTTTTT
TGTTTTCGCTTGTGCGGGGGGCGGGATGTGCACGCCTGTGGGGGAAGGAG
TGCGGGGTGGCGGTACTTCAATTTGGTGGATGTTGGTGGTATCCTCGTCG
CTCTGCAGCACTCTTCCTTATCAAGATCCTTGAGCCTCTGCACTACCATG
CAGCCAGCCAAGCCCAAAACCAGCTCGAGGGGGGGGGGGGGTTAACATTT
TCTGAATCGATCAAATTTTATGGAGGTGGTAGATTTGGTAGTGCTTCACG
TGAGATCCGCCGGATCGCCACGGCGAGGGTATTGATACCGGGATATCTGG
CCATCGGAAGACGCCACCTTTCCCAATCGGCAGCCGTCTTCAACGCAGTG
TATATATAGTATATACTATATGGTACATAGTATATTGTATGGTAGGGCCC
CATAGCATCAGACCTAACGTATAGGTATCCTACAATATTTACGGGGACAC
GCAGTAACTCAGGATCTTTTTTTTTGTTTTTTTTTTTGCTTTTGCACATT
GCACATTTTCCTCTATATTTCGGGTGCTATTTATTATTTCTTGTACCATA
GTAAGTACCAGGGGCGGTATGGTGTATAGTAGAAGTAGAGTTCTGATTAT
AATAGTTATTTTTCTCTTTGTTGACTCTTTGCTATAGTGTCTGACCACAA
GTCGGATAGGTCGGTTTAAGCCGATCGGATACACGTGTGCAAATCAATCA
ATCAATCAAATAAATCAACATATGTGATAGACTTGCTTTTCGGAGTACCG
TCTGTATACTGTACCTTTTATGTCCCAAAAGTATGCCAGGTACCCAAAAC
AACCAAACCAGACTAGAACCAAAACTGAGATAATTTAACGTCCGCCCGAA
AGAAAATATCCTTAGTATAGTAGAACATGGTCCAGGCGACTGACTCCCCA
AGTGCAATACTTGGCTCGGCAGAACGTACCTCGGCGAGCCGTCAGTCATG
ATTCTGCGCGCGTGCTACCACATTTACTCCAAGGGAACACGTAGATAGCT
TTTCCGAGGTCCGTCTGTATGCTGTTTACTGTACCTGTTATGTCCCAGAG
TATGCCAGGTACCCAAGACAACAAAACCAGGTGTCACTACTAGTCACTAC
AGCAGTACGGTCCTTGTCTTACAACATGATGTGTATGTGCAATCAAAATC
TTCCAGCTTGAAAATTGTCAAAGATAAACCTGAAAAAACACAACTGATTT
TAACCCTTTTGATACCATTAAATTAGTGTTAATAATTAATAGGGCTCTCT
GAAACGACGAAAAACTCTCTCGATGCCAGTCGACAGCTACAGCTACAGCC
CCGTTATTTTCCCTTTCGCTCCGTCCTCTCTAATTCCTGCGTAGTCACAA
CCCATGGAGTTCCCCAGGGCCCCGCTTCAAGCACGCCTCATTACGTGCTA
ACAGGCGCTCCAAACAGTAGTAGGGGCTAGTACCAAAAGGGTTAATTAAA
GGTGTTCGAGCCAACTCTAAAATCCGACCCCTTGAGTACCGCTAATTGAA
CAGAAGCATGGTTGGGATTACTGCCGTGTGTGTACCCCCGTTCTTTTGTA
CAGTTTTTTTTTGGGAAAATCTTTCCTCTCTCACTCGAAAAAATCGAGTA
TGATAGCCTTTACCACTTGTACCACTTGTACCACTCACATCACTCAGAAT
ATATAGGATTTATAATACAAAATGGATAAGCATGTCATATATAGGAATTA
TAGATCAAATGTGGTTCCAGGAATTTGGTGTGTTAGGGTTAGGGTTAGTG
TTTTTTGTTTTTTTATAATGTTGGAAGCACATGTTGATCGCCTTATTCAT
TTCAAGTCTATTTCCTATATATTACTATCGATAGTGCCAAGGGTGGTATA
GGGGACTAAAAAAATCGGGCCGCCAATGCTCGGTCGGTCGCTCGCTCGCT
CGCTCCGTGTGTTTCTTACTAGTTTCTTGGTCCAGGCGGGGGGTGAACAC
GAGTCGTGTGTCAATGCCGTCAAGGAAATGTTTGATTTTTACCATGGATG
TTTACATACACTTACTTCATCGCGTAAGGGTACTCAATAATGTTGATTAA
TTTACAGCTCTTTGACCGATTTCTATCTAAAATACTCATACTGGTACGCA
CTATCGATATTATCTATTATATTATCTATTCTACTGTAGTATAATAGCGA
TTTGATTTGGAAGTGAACCATGCCCAGACTAAATCCCTATATTGCATACG
TTTCGGGTAACAAAAACGGACAGGGATATTACTAAGAGGGAGAGAGGGCT
ATACTTGTACATGGATTGGGATCTTAAAACAGGGCTTAGTTGATGCCAAA
CAAGTCGATGTTTGGGTTGAGCTCCAAACAACTTGATTATAGTGTTGAGC
GACCACGCACACCTGACGGGCGTCGCCGTCGCTATTAATACCTACTATTA
ATAGTATACTACTGTTAAAAATACTACAAGTATCAAAAGCTCACCCCAAT
CGATGCAAAATGGTGCAGCTCACTATCCGCCGCGGGGGTGGGGTGACTTC
TGGCCGCAACGCCCCTCTGTTGCGGGTGGTCTGCGCCCAGCCTGCGCCCG
CGACCAGCGTTGCCTCCGAAGCCCCCGCCCGGCACCGCCCGACCGTCCGT
CTCCGCCCCCAGATATTTGGCCTCTGCCCTCTTGATTGATCGAATGGTTG
ATTGATTCATTGGCACACTTATTGCTGATCTGCATGTTCCGACCTATCCG
ACTTGTGAGTGAGATGCGAAATAGTCAACGGGAAAGTAGTGAATGAGAGG
TCTGCTTGTGCAGTTAGTTCACCATTACGGTATTTGATTGATTGATTGAT
TGCTTGATTGGTTTGCAATTTGCACACGTGTAGCCGATCGGCTTAATCCG
ACCTATCCGACTTGTGGTCAGATACGCAAAGGGCCAAGGAGAACAATATA
TAATACAAGGTCTCCCTTCGGGACGTGGGAAAGCTAAAGAGTGAAGGGNN
NNNNNNNNNNNNNNNNNNNATTATCTAATATATAGAGCAACATAATAGCT
GGAGTATATGCACAGCTAGTCAACGGAAGCCAACAACTGACAACACTCAA
GTCGAAAATTAAACACATGAAAAAGAGAGTGGATGCCACCTCCGAAAATA
AATTACGTTACAGTAGTACAGTAGTAATGTAGCTGTGGCTCGAAAAAAAC
TAAACAGAGGAAACCGAGAGTAGGTACTTGTACGCCCTGTACGACTATGA
TCCTCCGTCAGAAAGGAATAGGGACAAGGGCGGTATATTACAATTTTATC
TATCAGCTGTATACAATACGATGATTCTAAACACATAAATCCTACAGCAG
TATTACATGCAGTACATATATGTATACTGCTGTCTGCTGTGCACGCACAC
AAGGGCATGCGTTCAGAGCTACTGCTTAAACATACATATACAGAGCTCGA
TGCGTATATACATATAGACACATACCTGAATCAGTACAGTAGTATTATAC
ATACATAACACAGCAGTTGTTATACACATAGAGCCCTATATACAATATAC
ATACGTGCGTACATATAACACGCATGCATCCATGCCGCGGGTGTCAACGG
GCGCACAGAAAGAGAGAAGGGGAGAAGAGCAGCCAAGGGCCTCCCCGCTT
AGGATCACAGCAGTGTACGCAACATAAATAAGTGAACAGACAGCAGTGCC
AGATTTGTGTACTCTGTAGCACTGCTTGCTTGTGCTGTTGCTGCTGTGCT
GTTCAGTCGGCACGTCGGCACCCAGGGGCAGACTGATGATGTAAAATAGA
TTAAATTCCGCACAAAAGAACATCCACGGCATGGGCTCTTCATATTTTAC
TGTCGTTTCTGCTGTGGTGGGTACCCACGGGCGTACACAAGATGAGGAAG
GGGAGAAAGCCCATCGTGCGCCTCTACACGCAGGTAGCTTGCGCTACGTA
GCGCACCTGGCAGCAAGAGCTGTCAGCATCATGAATGATAAATGAGAAGT
GGGAGTTTTCCCGCCGCTTATTCGCCGCGTATTGGCAATAATGCCCGCCG
CATTGCGGTTTTCATGTGGTGATGCTTCGACGGGCACGCTCGTGACACCG
CTCATGCCAGGAGCTTTCGCAGAGGCCAGCTTTGGGAGAGAGGGTAGAGC
TCGGCNNNNNNNNNNAGGTACCCAAACCAAGATGTTAATTATAAAACGGG
AGGGAGGGGACAAAACCAACGAAATTATAAGTGTGTTTATATACTTGTCA
CCCGTATGGTGTTGAGGGAAAAATTAAACAAATACAAGAGGCTTGAAAAA
GCTACAAGACGTAATTAGGTACAGTATTGGGCACAACTTGAGTGCTGTAC
TGCATCAGTCGGGAAGGATGAGAGCGTTACAGGAATCACTACAGCAATCA
CTACAGTAACCACTACAGTAGTCACTACAGCAATCACTACAGCAATCCCT
ACAGTAATCACTACAGTAATCGCTACAGTAATCCCTACAAGTAATCACTA
CATCAATCACTACAGCAATCACTACAACTGTCTTGTACGGTAGTAATCAC
TACAGCAATCACTACATCAATCACTACAGCAATCACTACAACTGTCTTGT
ACTGTAGTAATCACTACAGCAATCACTACAGCAATCACTACAGTACACAC
TACAGTAATCACTACATCAATCACTACAAGTAATCACTACATCCATCACT
ACAGTAATCACTACAGCAATCACTACAGGTGTCGGAAGAATGAATAGGAT
GGGCCGTCTTAGTTTCACACATCATACCGCTGATGGGTGCTTCTCTCGTC
TTTTCCCCGTTGTGGCGCAGGTTCTCTTGATGGAGAGGATGTACATGCGA
AGGGAGATGTACCTGTCCATCATGATGGACCGGGGGTCGCAGGTATGTGC
CGCATTCGTTGATTTATGTTTCGCGGGCGTGTCTTACATGGCCTATGATA
CTGCTGCTGCATGAACCAGGGAAATAAATAGCGCAGCGCCGGACGGCCTA
CGCCCCCCCGCCCCCCCCCGGCCCCCCGGTGGCTCCCGGCAGGGCCGCCG
GAGGGCCCCCGGAGGGCGCATAAGGAGCTTTATCTACGCGCGTGCGTTGC
GCCGCTTAGCCTGCTGCTCGCTGCTCGCGCGCCGTATGTATATGTACCTC
GCCGATGTTCTGTGTTTGGCCGCTCAGTATGGCGCATTTAACGTCAAAAA
GTGGTACTAACAATGTATTAATAGTATACTAATAATAGTATAGTACCAAG
GGTTAAGAGAGGCCACATTATATCCTTATTTTAGTACGAGTAACCTATTT
GGGAGTGAGTCCTTTACTGCGGGTGTCATACTTTTTTATTATATATTATT
TTATTTCTTGTACCACTGTAAGCAGCGGGGACGGTGTGGTGAATTGTAGA
AGTAGAATTCTGATGAGTTATTGTCTCCGTTGATTCTCTGCCATATATAC
ATGTATATATATATATATATATAAATGTAGCATCCGACCGCAAGTCGGGT
GGGGTTAAGCCGATGCTTGTATACGTGTGCAAATCAACCAATCAAATCAA
TCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATCAATC
AATCAATCAACCAATCAATCAACCAATCAATCAATCAATCAATCACTCAA
TCAATCAATCAGTCAGTCAACCAACCAACCAATCAATCAATCAATCAAGC
AATCAATCAATCAATCAATCAACCAGTCAACCAATCAATCAATCGATCGA
AATTAATCGAAACCAATCAAAATCAATCAAAACGTCGATGACGGGTGCAA
AAATGTAACCACCACAGAGCGTGGCTTGTTTCCTTTCACACACATTTCCA
CCTTGTTTGATGTTGTATGTTTTATGTACAACTATGGCCAGGCACGGAGT
AGCCACTCACTACAGCTGTTCACTGCCCGATGGCCTTTAATACTGTATCC
CCCAAAACCAGAACGCCTTCATTCATTCATTCATGTTTTTTTTTGTTTTT
TTTCCAGGGACCCGTGATCGTGGCGTGTCCGGACGGGGGAACGTCGATCG
AGGACCTCGCTGAGTCTAACCCGGAACTGATCCTCAAGGTGAGTTTCGTT
TACCTTTACGTTTTACTTCAAGTTTTTATTTTTACTTTTTGTGTTTTGTG
TTTCTGTGCGTGTTTGTTTTTTGTGCGTGTGTGTGTGTTTGTTTGTTTGT
TTGTTTGTTTGCGCACAATTGATTAGGCCCGTCTGTGGTCACAAGGGATC
TAGAGCTCTACAGTATCCCCGGTCATTCTTACGCTAGGTTTCTATGTCTA
TCGCGAATGCTTTGGAGTCGGCGTTCCCGCGAGTCCCCTATACCACCCTT
TGCACTAGTAATATATAGGAAATAGACTTGAAATGAATAAGGCGATAAGG
CGGGGATGTGGTTCCAACATACTTCGAAGTATATATATAAACAAAACTAA
AAAAACTAAAAAAAACTAAAAAAAACTAACCCTATAACCCTAACCCTAAC
CCTAATTCCTGAAACCACATTTGATCTATAAATCCTGTATGATATGCTTA
TCCATTTTGTATTCTAAATCCTATACATTCTGAGTGCAACGGGTGGTATA
GGCTACTGGTTCCCGCAGGTCTTTCGTCGATCTGTCAGAGTTTTGGCTGT
GCTTTATTGTGAGGCTTGTGGCCGCATGTACCGTGTGTATTTGCAGAACT
AGAGCATGCTTTTTGTTCGTCGTTGTTCGTGTTTGTCGGTATTGTGTTTA
TTGTATCGTTATTCAAACAGCATTTCGTATGTGGTGTTTGCTAATGTGAC
TGTTTCCATTTGAGGAGGAGGTGGACGTGGCCTATCTGGAGGTATCTTTT
CGGTGTTTGTTTTGGGACACTTACGTACCATGTTGTGGCCTTATATTTTA
TTGTGAGTGCTCTAGCCGTATGTGTGATTGCTATATTTATAGACTAAAGC
TCAATGATTTTCTGGTACAATGCGGTTGTCATTTTTGACGGGTGCCCCAT
GATAGGAGGAGGTGAACGTGGAGGTGGGCCTTACGGACGCGCAAGCCAGC
AAAATCGCGAAGCACCTCAAGCTCTCCCCCGACGGACCCTCCTTCGAGGC
GGTGAGTCTTTTCGTTCATCAGTAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig9508:135..7609+

>mRNA_S-dermatodea_contig9508.17538.1 ID=mRNA_S-dermatodea_contig9508.17538.1|Name=mRNA_S-dermatodea_contig9508.17538.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at S-dermatodea_contig9508:135..7609+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGGCCCGAGGACGCGAAGCACTTTGCGTCAGAGATGTTGGGTCACAAGCT
GATCACCAAGCAGACTGGGGAGGAGGGGCTGCCCTGCGATAAGAGGCCCG
AGGACGCGAAGCACTTTGCGTCAGAGATGTTGGGTCACAAGCTGATCACC
AAGCAGACTGGGGAGGAGGGGCTGCCCTGCGATAAGGTTCTCTTGATGGA
GAGGATGTACATGCGAAGGGAGATGTACCTGTCCATCATGATGGACCGGG
GGTCGCAGGTTCTCTTGATGGAGAGGATGTACATGCGAAGGGAGATGTAC
CTGTCCATCATGATGGACCGGGGGTCGCAGGGACCCGTGATCGTGGCGTG
TCCGGACGGGGGAACGTCGATCGAGGACCTCGCTGAGTCTAACCCGGAAC
TGATCCTCAAGGGACCCGTGATCGTGGCGTGTCCGGACGGGGGAACGTCG
ATCGAGGACCTCGCTGAGTCTAACCCGGAACTGATCCTCAAGGAGGAGGT
GAACGTGGAGGTGGGCCTTACGGACGCGCAAGCCAGCAAAATCGCGAAGC
ACCTCAAGCTCTCCCCCGACGGACCCTCCTTCGAGGCGGTGAGTCTTTTC
GTTCATCAGTAAGAGGAGGTGAACGTGGAGGTGGGCCTTACGGACGCGCA
AGCCAGCAAAATCGCGAAGCACCTCAAGCTCTCCCCCGACGGACCCTCCT
TCGAGGCGGTGAGTCTTTTCGTTCATCAGTAA
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