prot_S-dermatodea_contig94832.17516.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig94832.17516.1
Unique Nameprot_S-dermatodea_contig94832.17516.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length46
Homology
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: D8LEF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF6_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 7.450e-22
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRNARK 45
            +QTL GHRDRVYSADFHPTEPKLVS SAD+TV+IW PNRKRN+RK
Sbjct:   38 IQTLLGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82          
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 1.240e-19
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRNARK 45
            +QTLRGHRDRVYS DFHPTEPKLVS SAD+TV+IW PNRKRN+RK
Sbjct:  557 IQTLRGHRDRVYSTDFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 601          
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A835Z281_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z281_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.080e-14
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNR--KRNARK 45
            +QTLRGH DRVY+  FHPTEP+LVS SAD+TV IW P++  +RN RK
Sbjct:   78 LQTLRGHNDRVYAVHFHPTEPRLVSGSADQTVRIWGPSKGGRRNGRK 124          
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A433D2F6_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D2F6_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 1.420e-12
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRN 42
            MQ L GH DRVY+  FHPTEP L SCSAD TV IW P +K+N
Sbjct:  153 MQRLEGHTDRVYAVHFHPTEPILASCSADFTVKIWGPTKKKN 194          
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A8H7Q4N1_MORIS (GED domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q4N1_MORIS)

HSP 1 Score: 67.0 bits (162), Expect = 8.980e-12
Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRNARK 45
            MQ L GH DRVY+A+FHPTEP L SCSAD T+ +W P   R  +K
Sbjct:  449 MQRLEGHTDRVYAANFHPTEPILASCSADYTIKVWGPGAPRGKKK 493          
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A4P9Z5R4_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z5R4_9FUNG)

HSP 1 Score: 65.5 bits (158), Expect = 3.110e-11
Identity = 26/37 (70.27%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVP 37
            +Q L GH DRVYS DFHPTEP L SCSAD T+ IW P
Sbjct:  385 LQRLEGHTDRVYSVDFHPTEPILCSCSADATIKIWAP 421          
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A4P9XX37_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XX37_9FUNG)

HSP 1 Score: 65.5 bits (158), Expect = 3.110e-11
Identity = 26/37 (70.27%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVP 37
            +Q L GH DRVYS DFHPTEP L SCSAD T+ IW P
Sbjct:  390 LQRLEGHTDRVYSVDFHPTEPILCSCSADATIKIWAP 426          
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 62.4 bits (150), Expect = 3.820e-10
Identity = 26/41 (63.41%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKR 41
            +Q L GH DRVYS DFHP+EP L S SAD TV IW+P   R
Sbjct:  453 LQRLEGHTDRVYSVDFHPSEPILASASADFTVKIWLPRTSR 493          
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A168T094_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168T094_ABSGL)

HSP 1 Score: 59.3 bits (142), Expect = 4.660e-9
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRK 40
            MQ + GH DRVYS +FHPTEP L S SAD TV IW P+ K
Sbjct:  466 MQRMEGHTDRVYSVNFHPTEPILASGSADFTVKIWGPSFK 505          
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: R7QRT1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRT1_CHOCR)

HSP 1 Score: 59.3 bits (142), Expect = 4.660e-9
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIW 35
            +QTL GH+DRVY  DFHP EP L SCSAD  + IW
Sbjct:  516 LQTLEGHKDRVYGVDFHPNEPILASCSADCGIKIW 550          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LEF6_ECTSI7.450e-2284.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNQ7_9PHAE1.240e-1984.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z281_9STRA2.080e-1465.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A433D2F6_9FUNG1.420e-1266.67Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
A0A8H7Q4N1_MORIS8.980e-1260.00GED domain-containing protein n=1 Tax=Mortierella ... [more]
A0A4P9Z5R4_9FUNG3.110e-1170.27WD40-repeat-containing domain protein n=1 Tax=Sync... [more]
A0A4P9XX37_9FUNG3.110e-1170.27WD40-repeat-containing domain protein n=1 Tax=Tham... [more]
T0QW05_SAPDV3.820e-1063.41Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A168T094_ABSGL4.660e-965.00Uncharacterized protein n=1 Tax=Absidia glauca Tax... [more]
R7QRT1_CHOCR4.660e-965.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..36
e-value: 7.9E-4
score: 28.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 2..35
e-value: 3.1E-8
score: 34.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 4..35
score: 13.249
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..45
e-value: 1.9E-11
score: 45.4
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..45
score: 11.998
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig94832contigS-dermatodea_contig94832:189..326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig94832.17516.1mRNA_S-dermatodea_contig94832.17516.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig94832 171..326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig94832.17516.1 ID=prot_S-dermatodea_contig94832.17516.1|Name=mRNA_S-dermatodea_contig94832.17516.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=46bp
MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRNARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf