mRNA_S-dermatodea_contig94832.17516.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: D8LEF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF6_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 3.510e-24 Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 1
Query: 1 RNQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRNARK 153
+ QGDE+QTL GHRDRVYSADFHPTEPKLVS SAD+TV+IW PNRKRN+RK
Sbjct: 32 KGQGDEIQTLLGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.090e-21 Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 1
Query: 1 RNQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRNARK 153
+ QGDE+QTLRGHRDRVYS DFHPTEPKLVS SAD+TV+IW PNRKRN+RK
Sbjct: 551 KGQGDEIQTLRGHRDRVYSTDFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 601
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A835Z281_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z281_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 9.460e-15 Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 1
Query: 1 RNQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNR--KRNARK 153
+ +G ++QTLRGH DRVY+ FHPTEP+LVS SAD+TV IW P++ +RN RK
Sbjct: 72 KGEGGDLQTLRGHNDRVYAVHFHPTEPRLVSGSADQTVRIWGPSKGGRRNGRK 124
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A433D2F6_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D2F6_9FUNG) HSP 1 Score: 66.6 bits (161), Expect = 3.630e-12 Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 4 NQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRN 144
N + MQ L GH DRVY+ FHPTEP L SCSAD TV IW P +K+N
Sbjct: 148 NSAELMQRLEGHTDRVYAVHFHPTEPILASCSADFTVKIWGPTKKKN 194
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A8H7Q4N1_MORIS (GED domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q4N1_MORIS) HSP 1 Score: 65.9 bits (159), Expect = 2.980e-11 Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 4 NQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRNARK 153
N + MQ L GH DRVY+A+FHPTEP L SCSAD T+ +W P R +K
Sbjct: 444 NTAELMQRLEGHTDRVYAANFHPTEPILASCSADYTIKVWGPGAPRGKKK 493
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A4P9Z5R4_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z5R4_9FUNG) HSP 1 Score: 63.9 bits (154), Expect = 1.410e-10 Identity = 26/37 (70.27%), Postives = 28/37 (75.68%), Query Frame = 1
Query: 19 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVP 129
+Q L GH DRVYS DFHPTEP L SCSAD T+ IW P
Sbjct: 385 LQRLEGHTDRVYSVDFHPTEPILCSCSADATIKIWAP 421
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A4P9XX37_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XX37_9FUNG) HSP 1 Score: 63.9 bits (154), Expect = 1.410e-10 Identity = 26/37 (70.27%), Postives = 28/37 (75.68%), Query Frame = 1
Query: 19 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVP 129
+Q L GH DRVYS DFHPTEP L SCSAD T+ IW P
Sbjct: 390 LQRLEGHTDRVYSVDFHPTEPILCSCSADATIKIWAP 426
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV) HSP 1 Score: 60.8 bits (146), Expect = 1.740e-9 Identity = 26/41 (63.41%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 19 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKR 141
+Q L GH DRVYS DFHP+EP L S SAD TV IW+P R
Sbjct: 453 LQRLEGHTDRVYSVDFHPSEPILASASADFTVKIWLPRTSR 493
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: A0A168T094_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168T094_ABSGL) HSP 1 Score: 57.8 bits (138), Expect = 2.120e-8 Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 19 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRK 138
MQ + GH DRVYS +FHPTEP L S SAD TV IW P+ K
Sbjct: 466 MQRMEGHTDRVYSVNFHPTEPILASGSADFTVKIWGPSFK 505
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Match: R7QRT1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRT1_CHOCR) HSP 1 Score: 57.8 bits (138), Expect = 2.120e-8 Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 1
Query: 19 MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIW 123
+QTL GH+DRVY DFHP EP L SCSAD + IW
Sbjct: 516 LQTLEGHKDRVYGVDFHPNEPILASCSADCGIKIW 550 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig94832.17516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig94832.17516.1 >prot_S-dermatodea_contig94832.17516.1 ID=prot_S-dermatodea_contig94832.17516.1|Name=mRNA_S-dermatodea_contig94832.17516.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=46bp MQTLRGHRDRVYSADFHPTEPKLVSCSADRTVMIWVPNRKRNARK*back to top mRNA from alignment at S-dermatodea_contig94832:171..326+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig94832.17516.1 ID=mRNA_S-dermatodea_contig94832.17516.1|Name=mRNA_S-dermatodea_contig94832.17516.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=156bp|location=Sequence derived from alignment at S-dermatodea_contig94832:171..326+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig94832:171..326+ >mRNA_S-dermatodea_contig94832.17516.1 ID=mRNA_S-dermatodea_contig94832.17516.1|Name=mRNA_S-dermatodea_contig94832.17516.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=276bp|location=Sequence derived from alignment at S-dermatodea_contig94832:171..326+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |