prot_S-dermatodea_contig9438.17468.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9438.17468.1
Unique Nameprot_S-dermatodea_contig9438.17468.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length220
Homology
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BLAST of mRNA_S-dermatodea_contig9438.17468.1 vs. uniprot
Match: A0A6H5K4W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4W3_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 9.120e-13
Identity = 42/91 (46.15%), Postives = 52/91 (57.14%), Query Frame = 0 
Query:   92 AAVEAFRPPEGFRSSGGAEQSFMYSWGVYCLKAVPEGPDDPAPRFYCLGSAKCRTAKHAIPCRNGDRSNVNKHLKSDHCISSERRVSSQGK 182
            AAV+ F+ P GF   G  + SFMYS GVY  +    G D    +F+CL    CR  K  IPCR GDRSNVN HLKS H +  +  V+ Q +
Sbjct:   89 AAVDNFQAPSGFVKKGCRQDSFMYSLGVYVEQI---GGDQH--KFFCLAGPDCRRKKKVIPCRRGDRSNVNSHLKSVHGMQGKGGVTKQAR 174
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BLAST of mRNA_S-dermatodea_contig9438.17468.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.780e-11
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:   90 VKAAVEAFRPPEGFRSSGGAEQSFMYSWGVYCLKAVPEGPDDPAPRFYCLGSAKCRTAKHAIPCRNGDRSNVNKHLKSDHCISSERRVSSQGK 182
            V  AV+ F+ PEG+   G  E+S+MYS GVY ++A+         +FYCL    CR     IPC+ GDRSNVN HLK+ H +     V  +GK
Sbjct:   82 VVKAVDDFKVPEGYVRKGSREKSYMYSLGVY-IEALKGDKH----QFYCLVDGTCRRKNKMIPCKGGDRSNVNSHLKNAHGLQGVGGVVKEGK 169
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9438.17468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K4W3_9PHAE9.120e-1346.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYQ2_9PHAE1.780e-1143.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9438contigS-dermatodea_contig9438:7488..8147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9438.17468.1mRNA_S-dermatodea_contig9438.17468.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9438 7098..8147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9438.17468.1 ID=prot_S-dermatodea_contig9438.17468.1|Name=mRNA_S-dermatodea_contig9438.17468.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=220bp
MDQQAPEPAPAPAPAPEPACPVPTDSGISDAAAQPSPTSRAKREAPPQPA
TPKPRSSGKKKTPKRSPVRVRSKKTWSTVTNATIEVPEDVKAAVEAFRPP
EGFRSSGGAEQSFMYSWGVYCLKAVPEGPDDPAPRFYCLGSAKCRTAKHA
IPCRNGDRSNVNKHLKSDHCISSERRVSSQGKGAERVEEDGCGTAADFAR
PHFFDADERERCATSFVIW*
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