prot_S-dermatodea_contig9431.17462.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9431.17462.1
Unique Nameprot_S-dermatodea_contig9431.17462.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length309
Homology
BLAST of mRNA_S-dermatodea_contig9431.17462.1 vs. uniprot
Match: A0A6H5JLI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLI6_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.080e-52
Identity = 154/382 (40.31%), Postives = 192/382 (50.26%), Query Frame = 0
Query:    1 MLHR-ECEVRVCQARHLVPKRGSESTSALRPNNNRGLSLYTLISHDGVHIPTEACRDIESPAWQRVAVFNLKLRCEKVDGEKE----KPASARESSSNSGATEQTRKGEGGKVTP---------------------------------------SRNPFA------QSLNPFADNFVPPSPRXXXXXXXXXXEP---------ATQLPLRTSLVLHLRVLSDSLVSKEVVGEVAVDLVPLLESGGDHLATDRLGHV---GSIPLKGL----------HDQETLAVDTWVALRERTGELRVQILMKPGCLEPAVNGRRKPSADLNG-RSKEVRFDEMARAGLVKTTVGAEQLSLDDRLLEIQEQYDFIAATGYRQGRPDGEAG 309
            +LHR +CEVRVCQARHLVPK G +     +P      +++ L+S DGVH  TE+CR+IE P+W+RVAVF+L L C   +G       KP   R+S+  +GA                                                     S NPFA      Q    FA NFVPP+             P         A    LR S+VLHLRVL   L SKEV+G+VAVDLVPLL SGGD LATDRL  +      PL  L          H    +AVDTWV+LR+ T ELRVQILMK    EPA +      A + G  +    FD ++  GLVKT++  EQ SLD+RLLE+QE YDF A +GYR+G+PD + G
Sbjct:    2 LLHRRQCEVRVCQARHLVPK-GRKRNGDDKPAVLVADAVWALMSIDGVHNTTESCRNIEHPSWERVAVFDLNL-CRAAEGIARGAPVKPP--RDSNPTAGAXXXXXXXXXXXXXXXXXFERPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLNPFAVAEAETQXXXXFASNFVPPAATPLSSPPPQAASPRSKSSCPPAAAAWVLRASMVLHLRVLHGRLRSKEVLGDVAVDLVPLLRSGGDRLATDRLEWLEEEDGAPLLPLGNGDAGVITTHPPPVVAVDTWVSLRQGTAELRVQILMKTP-REPASSNVGSQRAQVGGDEAWAAAFDALSADGLVKTSLDLEQRSLDERLLEVQETYDFSAGSGYREGKPDEDEG 378          
BLAST of mRNA_S-dermatodea_contig9431.17462.1 vs. uniprot
Match: A0A836CAD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 6.630e-14
Identity = 89/302 (29.47%), Postives = 123/302 (40.73%), Query Frame = 0
Query:    7 EVRVCQARHL---------VPKRGSESTSALRPNNNRGLS------------LYTLISHDGVHIPTEACRDIESPAWQRVAVFNLKLRCEKVDGEKEKPASARESSSNSGATEQTRKGEG-GKVTPSRNPFAQSLNPFADNFVPPSPRXXXXXXXXXXEPATQLPLRTS------LVLHLRVLSDSLVSKEVVGEVAVDLVPLLESGGDHLATDRLGHVGS-------------------IPL---------KGLH------------------DQETLAVDTWVALRERTGELRVQILMKP 234
            EVRV + RHL         VP+ G + +   + + + G +            L   I+    H+ TE C D++ P W +VA F         D      A+  E   ++ A E T      G  + +  P  Q L P   +   PSP             AT     T+        LHLRV SDSLVSK+++GEV VD+  L+ +GG  L TDR+G+  S                   +PL         +  H                  D E LAVDTWVALR+  GELRVQ+L++P
Sbjct:    8 EVRVAEGRHLFRAVSRGSGVPEAGDDGSERKKYSASAGAATSGRAPPLLNATLCVSITLGDKHVLTEQCADLQRPVWDKVASFTYDPCPPPADA----AAAPHEVEPSAAAVEMTDMFRAMGLPSRAAEPHDQQL-PLEPHSGKPSPPAAAAGLQQLSASATAGAAPTADAHARRRALHLRVFSDSLVSKDLLGEVTVDVAALVATGGALLVTDRIGYTDSGGAGSRGEEDDGDSSGAFMVPLALAASPTPPRSHHSERVSANGAAAAAVASAVDFEPLAVDTWVALRQGDGELRVQVLVRP 304          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9431.17462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLI6_9PHAE1.080e-5240.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAD2_9STRA6.630e-1429.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 7..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9431contigS-dermatodea_contig9431:5902..7111 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9431.17462.1mRNA_S-dermatodea_contig9431.17462.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9431 5902..7111 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9431.17462.1 ID=prot_S-dermatodea_contig9431.17462.1|Name=mRNA_S-dermatodea_contig9431.17462.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=309bp
MLHRECEVRVCQARHLVPKRGSESTSALRPNNNRGLSLYTLISHDGVHIP
TEACRDIESPAWQRVAVFNLKLRCEKVDGEKEKPASARESSSNSGATEQT
RKGEGGKVTPSRNPFAQSLNPFADNFVPPSPRPRRPAPTPPPEPATQLPL
RTSLVLHLRVLSDSLVSKEVVGEVAVDLVPLLESGGDHLATDRLGHVGSI
PLKGLHDQETLAVDTWVALRERTGELRVQILMKPGCLEPAVNGRRKPSAD
LNGRSKEVRFDEMARAGLVKTTVGAEQLSLDDRLLEIQEQYDFIAATGYR
QGRPDGEAG
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